BLASTX nr result

ID: Coptis21_contig00008091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008091
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY66875.1| P30Sh95F04 [Saccharum hybrid cultivar R570]             55   6e-06
ref|NP_001146255.1| uncharacterized protein LOC100279829 [Zea ma...    55   6e-06
gb|ACY66867.1| P10Sh148J07 [Saccharum hybrid cultivar R570]            55   8e-06

>gb|ACY66875.1| P30Sh95F04 [Saccharum hybrid cultivar R570]
          Length = 594

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
 Frame = +1

Query: 133 IEHNKH-----FYDYQVMASKLKTKLTKSAEDVLISSRYTSRPFTAARASEHVYSVHSVD 297
           IEH +H     F + Q +A    + L  SAE +++ + + S+ +   RA++  + + S +
Sbjct: 401 IEHIRHQLTCWFAERQNLAQSYNSVLVPSAEKLILEAIHDSQCYQVLRANKVEFEIVSSE 460

Query: 298 RTDTVDLLERTCTCGFFQ*VGLPCSHAMKAI 390
           RT+ VD   R+C+C  +Q  G+PC+HA  A+
Sbjct: 461 RTNIVDTQARSCSCRRWQIYGIPCAHAAAAL 491


>ref|NP_001146255.1| uncharacterized protein LOC100279829 [Zea mays]
           gi|219886411|gb|ACL53580.1| unknown [Zea mays]
          Length = 594

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
 Frame = +1

Query: 133 IEHNKH-----FYDYQVMASKLKTKLTKSAEDVLISSRYTSRPFTAARASEHVYSVHSVD 297
           IEH +H     F + Q +A    + L  SAE V++ + + S+ +   RA++  + + S +
Sbjct: 401 IEHIRHQLACWFAERQNLAQSYNSVLVPSAEKVILEAIHDSQCYQVLRANKVEFEIVSSE 460

Query: 298 RTDTVDLLERTCTCGFFQ*VGLPCSHAMKAI 390
           RT+ VD   R C+C  +Q  G+PC+HA  A+
Sbjct: 461 RTNIVDTQARFCSCRRWQIYGIPCAHAAAAL 491


>gb|ACY66867.1| P10Sh148J07 [Saccharum hybrid cultivar R570]
          Length = 594

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
 Frame = +1

Query: 133 IEHNKH-----FYDYQVMASKLKTKLTKSAEDVLISSRYTSRPFTAARASEHVYSVHSVD 297
           IEH +H     F + Q +A    + L  SAE ++  + + S+ +   RA++  + + S++
Sbjct: 401 IEHIRHQLTCWFAERQNLAQSYNSVLVPSAEKLISEAIHDSQCYQVLRANKVEFEIVSLE 460

Query: 298 RTDTVDLLERTCTCGFFQ*VGLPCSHAMKAI 390
           RT+ VD   R+C+C  +Q  G+PC+HA  A+
Sbjct: 461 RTNIVDTQARSCSCRRWQIYGIPCAHAAAAL 491


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