BLASTX nr result

ID: Coptis21_contig00008087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008087
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275626.1| PREDICTED: tryptophanyl-tRNA synthetase, cyt...   101   7e-20
emb|CAN66126.1| hypothetical protein VITISV_027725 [Vitis vinifera]   100   9e-20
ref|XP_002882364.1| tRNA synthetase class I family protein [Arab...   100   2e-19
ref|XP_002530195.1| tryptophanyl-tRNA synthetase, putative [Rici...    99   4e-19
ref|XP_002312840.1| predicted protein [Populus trichocarpa] gi|1...    98   6e-19

>ref|XP_002275626.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic [Vitis
           vinifera] gi|302143316|emb|CBI21877.3| unnamed protein
           product [Vitis vinifera]
          Length = 399

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/59 (81%), Positives = 52/59 (88%)
 Frame = -3

Query: 178 EEMEEQVVTPWEVSAKGGGKIDYEKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRGV 2
           EE EEQVV PWEVSAK GGKIDY+KLI KFGCQ+LD +LIDRVQRLT + PHVFLRRGV
Sbjct: 8   EEEEEQVVNPWEVSAKDGGKIDYDKLIDKFGCQRLDQTLIDRVQRLTSRPPHVFLRRGV 66


>emb|CAN66126.1| hypothetical protein VITISV_027725 [Vitis vinifera]
          Length = 399

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/59 (79%), Positives = 52/59 (88%)
 Frame = -3

Query: 178 EEMEEQVVTPWEVSAKGGGKIDYEKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRGV 2
           EE EEQVV PWEVSAK GGKIDY+KLI KFGCQ+LD +LIDRVQRLT + PH+FLRRGV
Sbjct: 8   EEEEEQVVNPWEVSAKDGGKIDYDKLIDKFGCQRLDQTLIDRVQRLTSRPPHIFLRRGV 66


>ref|XP_002882364.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297328204|gb|EFH58623.1| tRNA synthetase
           class I family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 402

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/61 (78%), Positives = 51/61 (83%)
 Frame = -3

Query: 184 RIEEMEEQVVTPWEVSAKGGGKIDYEKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRG 5
           R  E  EQVV PWEVSAK GGKIDY+KLI KFGCQ+LD SLIDRVQRLT + PHVFLRRG
Sbjct: 9   REAESSEQVVNPWEVSAKDGGKIDYDKLIDKFGCQRLDESLIDRVQRLTSRQPHVFLRRG 68

Query: 4   V 2
           V
Sbjct: 69  V 69


>ref|XP_002530195.1| tryptophanyl-tRNA synthetase, putative [Ricinus communis]
           gi|223530288|gb|EEF32185.1| tryptophanyl-tRNA
           synthetase, putative [Ricinus communis]
          Length = 405

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/59 (79%), Positives = 51/59 (86%)
 Frame = -3

Query: 178 EEMEEQVVTPWEVSAKGGGKIDYEKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRGV 2
           E  EEQVV PWEVSAK GGKIDY+KLI KFGCQ+LD +LIDRV RLTG+ PHVFLRRGV
Sbjct: 14  EGEEEQVVNPWEVSAKDGGKIDYDKLIDKFGCQRLDQTLIDRVHRLTGRPPHVFLRRGV 72


>ref|XP_002312840.1| predicted protein [Populus trichocarpa] gi|118482985|gb|ABK93404.1|
           unknown [Populus trichocarpa]
           gi|222849248|gb|EEE86795.1| predicted protein [Populus
           trichocarpa]
          Length = 404

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/63 (69%), Positives = 54/63 (85%)
 Frame = -3

Query: 190 RRRIEEMEEQVVTPWEVSAKGGGKIDYEKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLR 11
           + ++ E E+Q+V PWEV+AK GGKIDY+KLI KFGCQ+LD +LIDRV RLTG+ PHVFLR
Sbjct: 9   QNQLAEEEDQIVNPWEVAAKDGGKIDYDKLIDKFGCQRLDQTLIDRVHRLTGRPPHVFLR 68

Query: 10  RGV 2
           RGV
Sbjct: 69  RGV 71


Top