BLASTX nr result
ID: Coptis21_contig00008085
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00008085
(1668 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300544.1| predicted protein [Populus trichocarpa] gi|2... 197 6e-56
ref|XP_002510732.1| hmg-CoA reductase, putative [Ricinus communi... 198 6e-56
ref|XP_002275827.1| PREDICTED: 3-hydroxy-3-methylglutaryl-coenzy... 197 3e-55
dbj|BAE92730.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase ... 195 3e-55
emb|CBI40773.3| unnamed protein product [Vitis vinifera] 197 3e-55
>ref|XP_002300544.1| predicted protein [Populus trichocarpa] gi|222847802|gb|EEE85349.1|
predicted protein [Populus trichocarpa]
Length = 577
Score = 197 bits (500), Expect(2) = 6e-56
Identities = 105/160 (65%), Positives = 125/160 (78%), Gaps = 5/160 (3%)
Frame = +3
Query: 780 MEIPAVFVGSVLLSFIDCRLLLSSL-AFLAGVSCTFCK-VYASGGASSVLLKEGMTRAPI 953
++IP G +LL+ + + +++ L + CK +YASGGASS+LLK+ MTRAP+
Sbjct: 231 VQIPVGIAGPLLLNGTEYMVPMATTEGCLVASTNRGCKAIYASGGASSMLLKDAMTRAPV 290
Query: 954 VRFGTA---AELKFFVEKPANFDTLSVIFNRSSRFARLQYIQ*AMAGKNLYMRFTCSTGD 1124
VRFGTA AELKFFVE PANFDTLSV FNRSSRF RLQ I+ A+AGKNLYMRF+CSTGD
Sbjct: 291 VRFGTAKRAAELKFFVEDPANFDTLSVAFNRSSRFGRLQNIKCAVAGKNLYMRFSCSTGD 350
Query: 1125 TMGMNMVSKGVQNALDFLQNDFPDMDVISISGNFLSDKKP 1244
MGMNMVSKGVQN LD++Q DFPDMD+I ISGNF SDKKP
Sbjct: 351 AMGMNMVSKGVQNVLDYVQTDFPDMDIIGISGNFCSDKKP 390
Score = 48.9 bits (115), Expect(2) = 6e-56
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 7/50 (14%)
Frame = +1
Query: 1219 GTFCQTRNH*SAVNWIEGRGKSVGCEAIIKEE-------TGMDLVISLSL 1347
G FC + +AVNWIEGRGKSV CEAIIKEE T +D ++ L++
Sbjct: 382 GNFCSDKKP-AAVNWIEGRGKSVVCEAIIKEEVVQKVLKTNIDTLVELNM 430
>ref|XP_002510732.1| hmg-CoA reductase, putative [Ricinus communis]
gi|223551433|gb|EEF52919.1| hmg-CoA reductase, putative
[Ricinus communis]
Length = 576
Score = 198 bits (504), Expect(2) = 6e-56
Identities = 106/160 (66%), Positives = 126/160 (78%), Gaps = 5/160 (3%)
Frame = +3
Query: 780 MEIPAVFVGSVLLSFIDCRLLLSSL-AFLAGVSCTFCK-VYASGGASSVLLKEGMTRAPI 953
++IP G +LL + + +++ L + CK ++ SGGA+SVLLK+GMTRAP+
Sbjct: 230 VQIPVGIAGPLLLDGREYSVPMATTEGCLVASTNRGCKAIHLSGGANSVLLKDGMTRAPV 289
Query: 954 VRFGTAA---ELKFFVEKPANFDTLSVIFNRSSRFARLQYIQ*AMAGKNLYMRFTCSTGD 1124
VRFG+AA ELKFF+E P NFDTLSV+FNRSSRFA+LQ IQ A+AGKNLYMRF+CSTGD
Sbjct: 290 VRFGSAARAAELKFFLENPENFDTLSVVFNRSSRFAKLQAIQCAIAGKNLYMRFSCSTGD 349
Query: 1125 TMGMNMVSKGVQNALDFLQNDFPDMDVISISGNFLSDKKP 1244
MGMNMVSKGVQN LDFLQNDFPDMDVI ISGNF SDKKP
Sbjct: 350 AMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKP 389
Score = 47.4 bits (111), Expect(2) = 6e-56
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +1
Query: 1219 GTFCQTRNH*SAVNWIEGRGKSVGCEAIIKEE 1314
G FC + +AVNWIEGRGKSV CEAIIKEE
Sbjct: 381 GNFCSDKKP-AAVNWIEGRGKSVVCEAIIKEE 411
>ref|XP_002275827.1| PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like
[Vitis vinifera]
Length = 593
Score = 197 bits (502), Expect(2) = 3e-55
Identities = 105/160 (65%), Positives = 125/160 (78%), Gaps = 5/160 (3%)
Frame = +3
Query: 780 MEIPAVFVGSVLLSFIDCRLLLSSL-AFLAGVSCTFCK-VYASGGASSVLLKEGMTRAPI 953
++IP G +LL + + +++ L + CK +Y SGGA+S++L++GMTRAP+
Sbjct: 247 VQIPVGIAGPLLLDGFEYSVPMATTEGCLVASTNRGCKAIYVSGGATSMVLRDGMTRAPV 306
Query: 954 VRFGTA---AELKFFVEKPANFDTLSVIFNRSSRFARLQYIQ*AMAGKNLYMRFTCSTGD 1124
VRF TA AELKFF+E P NF+TLSVIFNRSSRFARLQ IQ AMAGKNLY+RF+CSTGD
Sbjct: 307 VRFATAKRAAELKFFLENPENFETLSVIFNRSSRFARLQSIQCAMAGKNLYIRFSCSTGD 366
Query: 1125 TMGMNMVSKGVQNALDFLQNDFPDMDVISISGNFLSDKKP 1244
MGMNMVSKGVQN LDFLQNDFPDMDVI ISGNF SDKKP
Sbjct: 367 AMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKP 406
Score = 45.8 bits (107), Expect(2) = 3e-55
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1
Query: 1219 GTFCQTRNH*SAVNWIEGRGKSVGCEAIIKEE 1314
G FC + +AVNWIEGRGKSV CEA+IKE+
Sbjct: 398 GNFCSDKKP-AAVNWIEGRGKSVVCEAVIKED 428
>dbj|BAE92730.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase [Gentiana lutea]
Length = 586
Score = 195 bits (496), Expect(2) = 3e-55
Identities = 100/124 (80%), Positives = 110/124 (88%), Gaps = 4/124 (3%)
Frame = +3
Query: 885 CK-VYASGGASSVLLKEGMTRAPIVRFGTA---AELKFFVEKPANFDTLSVIFNRSSRFA 1052
CK + A GGA+SVLLK+GMTRAP+VRFGTA AELKFFVE P NFDT+SVIFN+SSRFA
Sbjct: 274 CKAMVACGGATSVLLKDGMTRAPVVRFGTAKRAAELKFFVEDPLNFDTISVIFNKSSRFA 333
Query: 1053 RLQYIQ*AMAGKNLYMRFTCSTGDTMGMNMVSKGVQNALDFLQNDFPDMDVISISGNFLS 1232
+LQ IQ A+AGKNLYMRFTCSTGD MGMNMVSKGVQN LDFLQ+DFPDMDVI ISGNF +
Sbjct: 334 KLQRIQCAIAGKNLYMRFTCSTGDAMGMNMVSKGVQNVLDFLQSDFPDMDVIGISGNFCA 393
Query: 1233 DKKP 1244
DKKP
Sbjct: 394 DKKP 397
Score = 48.1 bits (113), Expect(2) = 3e-55
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +1
Query: 1219 GTFCQTRNH*SAVNWIEGRGKSVGCEAIIKEE 1314
G FC + SAVNWIEGRGKSV CEAIIKEE
Sbjct: 389 GNFCADKKP-SAVNWIEGRGKSVVCEAIIKEE 419
>emb|CBI40773.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 197 bits (502), Expect(2) = 3e-55
Identities = 105/160 (65%), Positives = 125/160 (78%), Gaps = 5/160 (3%)
Frame = +3
Query: 780 MEIPAVFVGSVLLSFIDCRLLLSSL-AFLAGVSCTFCK-VYASGGASSVLLKEGMTRAPI 953
++IP G +LL + + +++ L + CK +Y SGGA+S++L++GMTRAP+
Sbjct: 195 VQIPVGIAGPLLLDGFEYSVPMATTEGCLVASTNRGCKAIYVSGGATSMVLRDGMTRAPV 254
Query: 954 VRFGTA---AELKFFVEKPANFDTLSVIFNRSSRFARLQYIQ*AMAGKNLYMRFTCSTGD 1124
VRF TA AELKFF+E P NF+TLSVIFNRSSRFARLQ IQ AMAGKNLY+RF+CSTGD
Sbjct: 255 VRFATAKRAAELKFFLENPENFETLSVIFNRSSRFARLQSIQCAMAGKNLYIRFSCSTGD 314
Query: 1125 TMGMNMVSKGVQNALDFLQNDFPDMDVISISGNFLSDKKP 1244
MGMNMVSKGVQN LDFLQNDFPDMDVI ISGNF SDKKP
Sbjct: 315 AMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKP 354
Score = 45.8 bits (107), Expect(2) = 3e-55
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1
Query: 1219 GTFCQTRNH*SAVNWIEGRGKSVGCEAIIKEE 1314
G FC + +AVNWIEGRGKSV CEA+IKE+
Sbjct: 346 GNFCSDKKP-AAVNWIEGRGKSVVCEAVIKED 376