BLASTX nr result

ID: Coptis21_contig00008075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008075
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269140.2| PREDICTED: B3 domain-containing protein Os11...    97   1e-18
emb|CBI40975.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_003615645.1| B3 domain-containing transcription factor VR...    96   2e-18
ref|XP_002315168.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
emb|CAN72783.1| hypothetical protein VITISV_008016 [Vitis vinifera]    94   2e-17

>ref|XP_002269140.2| PREDICTED: B3 domain-containing protein Os11g0197600-like [Vitis
           vinifera]
          Length = 598

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 42/76 (55%), Positives = 54/76 (71%)
 Frame = -1

Query: 258 FGNDLSDVAHLKVQGGRKWMVEMRKNDGNIFFQNGWQEFVEYYSISTGHFLVFKYNGASD 79
           +G +LS++  LKV  G  W V +++ DG ++   GW+EFVEYYSI  GHFLVF+Y G S 
Sbjct: 214 YGKNLSNIMFLKVPSGAVWQVGLKRGDGEVWLDGGWREFVEYYSIGYGHFLVFRYEGNSI 273

Query: 78  FRVLIFDMTACEISYP 31
           F +LIFDMTA EI YP
Sbjct: 274 FHILIFDMTASEIEYP 289



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/64 (40%), Positives = 40/64 (62%)
 Frame = -1

Query: 234 AHLKVQGGRKWMVEMRKNDGNIFFQNGWQEFVEYYSISTGHFLVFKYNGASDFRVLIFDM 55
           A LK   G  WMV +++ D   FF+ GW++FV+   +  G FLVF + G S F+V+++D 
Sbjct: 41  AVLKTVTGESWMVSVKQEDSCYFFKKGWRKFVKDQHLEAGDFLVFWFLGDSTFQVVVYDK 100

Query: 54  TACE 43
           + CE
Sbjct: 101 SGCE 104


>emb|CBI40975.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 42/76 (55%), Positives = 54/76 (71%)
 Frame = -1

Query: 258 FGNDLSDVAHLKVQGGRKWMVEMRKNDGNIFFQNGWQEFVEYYSISTGHFLVFKYNGASD 79
           +G +LS++  LKV  G  W V +++ DG ++   GW+EFVEYYSI  GHFLVF+Y G S 
Sbjct: 42  YGKNLSNIMFLKVPSGAVWQVGLKRGDGEVWLDGGWREFVEYYSIGYGHFLVFRYEGNSI 101

Query: 78  FRVLIFDMTACEISYP 31
           F +LIFDMTA EI YP
Sbjct: 102 FHILIFDMTASEIEYP 117


>ref|XP_003615645.1| B3 domain-containing transcription factor VRN1 [Medicago
           truncatula] gi|355516980|gb|AES98603.1| B3
           domain-containing transcription factor VRN1 [Medicago
           truncatula]
          Length = 274

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/78 (57%), Positives = 56/78 (71%)
 Frame = -1

Query: 258 FGNDLSDVAHLKVQGGRKWMVEMRKNDGNIFFQNGWQEFVEYYSISTGHFLVFKYNGASD 79
           FGN+L++VA + V  GR W +E++K   N+FF N WQEFVEYYSI  G F+ FKY G S 
Sbjct: 45  FGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFISFKYEGNSK 104

Query: 78  FRVLIFDMTACEISYPDE 25
           F V+IFD T+ EISYP E
Sbjct: 105 FSVIIFDATSVEISYPFE 122


>ref|XP_002315168.1| predicted protein [Populus trichocarpa] gi|222864208|gb|EEF01339.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/75 (56%), Positives = 54/75 (72%)
 Frame = -1

Query: 258 FGNDLSDVAHLKVQGGRKWMVEMRKNDGNIFFQNGWQEFVEYYSISTGHFLVFKYNGASD 79
           FG  LSD+A + V  G +W V + K   NI+F  GWQEFVE++SI +G+ +VF+Y G S+
Sbjct: 12  FGEGLSDIAKVAVPNGNEWQVGITKEHNNIWFDEGWQEFVEHHSIGSGYLVVFRYRGDSN 71

Query: 78  FRVLIFDMTACEISY 34
           F VLIFDMTACEI Y
Sbjct: 72  FSVLIFDMTACEIQY 86


>emb|CAN72783.1| hypothetical protein VITISV_008016 [Vitis vinifera]
          Length = 749

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/76 (53%), Positives = 52/76 (68%)
 Frame = -1

Query: 258 FGNDLSDVAHLKVQGGRKWMVEMRKNDGNIFFQNGWQEFVEYYSISTGHFLVFKYNGASD 79
           +G +LS++  LKV  G  W V +++ DG ++   GW+EFVEYYSI  GHFLVF+Y G S 
Sbjct: 49  YGKNLSNIMFLKVPSGAVWQVGLKRGDGEVWLDGGWREFVEYYSIGYGHFLVFRYEGNSI 108

Query: 78  FRVLIFDMTACEISYP 31
           F  LIFD TA EI YP
Sbjct: 109 FHXLIFDXTASEIEYP 124



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/47 (63%), Positives = 34/47 (72%)
 Frame = -1

Query: 171 IFFQNGWQEFVEYYSISTGHFLVFKYNGASDFRVLIFDMTACEISYP 31
           I  + GWQEF E+YSI  GH L+F+Y G S F VLIFDMTA EI YP
Sbjct: 418 ILLKGGWQEFCEFYSIGYGHLLLFRYEGXSHFHVLIFDMTASEIEYP 464


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