BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008068
         (1979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [...   655   0.0  
gb|ADL36841.1| TLP domain class transcription factor [Malus x do...   609   e-172
ref|NP_850481.1| Tubby-like F-box protein 3 [Arabidopsis thalian...   598   e-168
ref|NP_001189775.1| Tubby-like F-box protein 3 [Arabidopsis thal...   598   e-168
ref|XP_002882136.1| hypothetical protein ARALYDRAFT_322431 [Arab...   597   e-168

>ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [Vitis vinifera]
          Length = 405

 Score =  655 bits (1691), Expect = 0.0
 Identities = 327/411 (79%), Positives = 354/411 (86%), Gaps = 4/411 (0%)
 Frame = +3

Query: 204  MPLKSIIQDMRSEIGSISRRGFDVK---GLRSRSHRVVQDGGLVVVPLASIDAFKHSCWA 374
            M  KSIIQDMR E GSISR+GF+VK   GLRSRSHRVVQD  +VV      DA + SCWA
Sbjct: 1    MSFKSIIQDMRGEFGSISRKGFEVKFNYGLRSRSHRVVQDSSMVV------DALRQSCWA 54

Query: 375  NMPPELLRDVLKRIEESECDWPLRKHVISCAGVCRSWRGIVKEIVKLPEVSGKFTFPISL 554
            NMPPELLRDVL RIE SE  WP RK+V++CAGVCRSWR I KEIVK PE+SGK TFPISL
Sbjct: 55   NMPPELLRDVLMRIEASESTWPPRKNVVACAGVCRSWREITKEIVKTPELSGKLTFPISL 114

Query: 555  KQPGPRDALLQCFIKRNRSTQTYHLYLGLTQALTDNGKFLLAACKYRRPTCTDYIISLNA 734
            KQPGPR +LLQC+IKRNRS QTYHLYLGL QA TD+GKFLLAA K RRPTCTDYIISLNA
Sbjct: 115  KQPGPRGSLLQCYIKRNRSNQTYHLYLGLNQASTDDGKFLLAARKCRRPTCTDYIISLNA 174

Query: 735  DDMTKGSGTYIGKLRSNFLGTKFVIYDGQPPHAGATGTKSRSTR-LGLKRVSPRVPAGNY 911
            DD++KGS TYIGKLRSNFLGTKF +YD QPP+AGA  +KSRSTR LG ++VSPRVPAGNY
Sbjct: 175  DDVSKGSTTYIGKLRSNFLGTKFTVYDAQPPNAGARISKSRSTRRLGSRQVSPRVPAGNY 234

Query: 912  AVAHVQYELNVLGSRGPRRMQCTMDAIPTNAIEPGGVVPTQTEFSLSNPDFFPSLPFFRS 1091
             VAH+ YELNVLGSRGPRRMQC MDAIP NAIEPGGV PTQTEF LSN D FPS PFFRS
Sbjct: 235  PVAHISYELNVLGSRGPRRMQCVMDAIPANAIEPGGVAPTQTEFVLSNVDSFPSFPFFRS 294

Query: 1092 KSTRTESLLSGPLANPKEGMLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVASPE 1271
            KS RTESL SGPL+ PK+ MLVLKNKAPRWHEQLQCWCLNF GRVTVASVKNFQLVAS E
Sbjct: 295  KSNRTESLHSGPLSGPKDEMLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASAE 354

Query: 1272 NGLTGQEQEKVLLQFGKVGKDLFTMDFRYPLSAFQAFAICLSSFDTKIACE 1424
            NG+ GQE E V+LQFGKVGKD+FTMD++YP+SAFQAFAICLSSFDTKIACE
Sbjct: 355  NGVAGQEHENVILQFGKVGKDVFTMDYQYPISAFQAFAICLSSFDTKIACE 405


>gb|ADL36841.1| TLP domain class transcription factor [Malus x domestica]
          Length = 401

 Score =  609 bits (1570), Expect = e-172
 Identities = 300/408 (73%), Positives = 344/408 (84%), Gaps = 1/408 (0%)
 Frame = +3

Query: 204  MPLKSIIQDMRSEIGSISRRGFDVK-GLRSRSHRVVQDGGLVVVPLASIDAFKHSCWANM 380
            M  KS+IQDM+ E+GSISR+ FDVK G+RSRS RVVQD          +DA K SCWANM
Sbjct: 1    MSFKSMIQDMKGELGSISRKSFDVKFGMRSRSQRVVQDTSF------RVDALKQSCWANM 54

Query: 381  PPELLRDVLKRIEESECDWPLRKHVISCAGVCRSWRGIVKEIVKLPEVSGKFTFPISLKQ 560
            PPELLRDVL RIE S+  WP RK+V+ CAGVCR+WR I+KEIVK PEVSGK TFPISLKQ
Sbjct: 55   PPELLRDVLMRIEASDDTWPPRKNVVCCAGVCRNWREIMKEIVKSPEVSGKLTFPISLKQ 114

Query: 561  PGPRDALLQCFIKRNRSTQTYHLYLGLTQALTDNGKFLLAACKYRRPTCTDYIISLNADD 740
            PGPR++LLQC+IKR+RS QTY+L+LGL+QA TD+GKFLLAA K RRPTCTDYIISLNA+ 
Sbjct: 115  PGPRNSLLQCYIKRSRSNQTYYLFLGLSQASTDDGKFLLAAKKCRRPTCTDYIISLNAEV 174

Query: 741  MTKGSGTYIGKLRSNFLGTKFVIYDGQPPHAGATGTKSRSTRLGLKRVSPRVPAGNYAVA 920
            ++KG+  ++GKLRSNFLGTKF IYD QP ++GA  TK RSTRL + +VSPRVPAGNY VA
Sbjct: 175  VSKGNSAFVGKLRSNFLGTKFTIYDAQPTNSGAKVTKCRSTRL-VNKVSPRVPAGNYPVA 233

Query: 921  HVQYELNVLGSRGPRRMQCTMDAIPTNAIEPGGVVPTQTEFSLSNPDFFPSLPFFRSKST 1100
            H+ YELNV+G+RGPRRMQC MD+IP  A+EPGGV PTQTEF  SN D FPS+PFFRSKST
Sbjct: 234  HIAYELNVMGARGPRRMQCVMDSIPARAVEPGGVAPTQTEFMHSNTDSFPSVPFFRSKST 293

Query: 1101 RTESLLSGPLANPKEGMLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVASPENGL 1280
            RTE+  S   +   EGMLVL+NKAPRWHEQLQCWCLNF GRVTVASVKNFQLV+SPENG+
Sbjct: 294  RTENFPSPLESGENEGMLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVSSPENGV 353

Query: 1281 TGQEQEKVLLQFGKVGKDLFTMDFRYPLSAFQAFAICLSSFDTKIACE 1424
             GQE E V+LQFGKVGKD+FTMD+RYP+SAFQAFAICLSSFDTKIACE
Sbjct: 354  AGQEHENVILQFGKVGKDVFTMDYRYPISAFQAFAICLSSFDTKIACE 401


>ref|NP_850481.1| Tubby-like F-box protein 3 [Arabidopsis thaliana]
            gi|79324947|ref|NP_001031558.1| Tubby-like F-box protein
            3 [Arabidopsis thaliana]
            gi|75248467|sp|Q8VY21.1|TLP3_ARATH RecName:
            Full=Tubby-like F-box protein 3; Short=AtTLP3
            gi|18377640|gb|AAL66970.1| putative tubby protein
            [Arabidopsis thaliana] gi|20465543|gb|AAM20254.1|
            putative tubby protein [Arabidopsis thaliana]
            gi|27372514|gb|AAK98802.1| tubby-like protein 3
            [Arabidopsis thaliana] gi|330255813|gb|AEC10907.1|
            Tubby-like F-box protein 3 [Arabidopsis thaliana]
            gi|330255814|gb|AEC10908.1| Tubby-like F-box protein 3
            [Arabidopsis thaliana]
          Length = 406

 Score =  598 bits (1543), Expect = e-168
 Identities = 301/412 (73%), Positives = 343/412 (83%), Gaps = 5/412 (1%)
 Frame = +3

Query: 204  MPLKSIIQDMRSEIGSISRRGFDVK-GL-RSRSHRVVQDGGLVVVPLASIDAFKHSCWAN 377
            M  KS+IQDMR E+GSISR+GFDV+ G  RSRS RVVQD  + V      DAFK SCWA+
Sbjct: 1    MSFKSLIQDMRGELGSISRKGFDVRFGYGRSRSQRVVQDTSVPV------DAFKQSCWAS 54

Query: 378  MPPELLRDVLKRIEESECDWPLRKHVISCAGVCRSWRGIVKEIVKLPEVSGKFTFPISLK 557
            MPPELLRDVL RIE+SE  WP RK+V+SCAGVCR+WR IVKEIV++PE+S K TFPISLK
Sbjct: 55   MPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLK 114

Query: 558  QPGPRDALLQCFIKRNRSTQTYHLYLGLTQALT-DNGKFLLAACKYRRPTCTDYIISLNA 734
            QPGPR +L+QC+I RNRS QTY+LYLGL QA + D+GKFLLAA ++RRPTCTDYIISLN 
Sbjct: 115  QPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNC 174

Query: 735  DDMTKGSGTYIGKLRSNFLGTKFVIYDGQPPHAGATGTKSRSTRL-GLKRVSPRVPAGNY 911
            DD+++GS TYIGKLRSNFLGTKF +YD QP + G   T++RS+RL  LK+VSPR+P+GNY
Sbjct: 175  DDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNY 234

Query: 912  AVAHVQYELNVLGSRGPRRMQCTMDAIPTNAIEPGGVVPTQTEFSLSNPDFFPSLPFFRS 1091
             VAH+ YELNVLGSRGPRRMQC MDAIP +A+EPGG  PTQTE   SN D FPS  FFRS
Sbjct: 235  PVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFRS 294

Query: 1092 KSTRTESLLSGPL-ANPKEGMLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVASP 1268
            KS R ESL SGP  A  KEG+LVLKNKAPRWHEQLQCWCLNF GRVTVASVKNFQLVA+P
Sbjct: 295  KSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAAP 354

Query: 1269 ENGLTGQEQEKVLLQFGKVGKDLFTMDFRYPLSAFQAFAICLSSFDTKIACE 1424
            ENG  G E E V+LQFGKVGKD+FTMD++YP+SAFQAF ICLSSFDTKIACE
Sbjct: 355  ENGPAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 406


>ref|NP_001189775.1| Tubby-like F-box protein 3 [Arabidopsis thaliana]
            gi|3738302|gb|AAC63644.1| putative tubby protein
            [Arabidopsis thaliana] gi|20197552|gb|AAM15124.1|
            putative tubby protein [Arabidopsis thaliana]
            gi|227204449|dbj|BAH57076.1| AT2G47900 [Arabidopsis
            thaliana] gi|330255815|gb|AEC10909.1| Tubby-like F-box
            protein 3 [Arabidopsis thaliana]
          Length = 407

 Score =  598 bits (1541), Expect = e-168
 Identities = 301/413 (72%), Positives = 342/413 (82%), Gaps = 6/413 (1%)
 Frame = +3

Query: 204  MPLKSIIQDMRSEIGSISRRGFDVK-GL-RSRSHRVVQDGGLVVVPLASIDAFKHSCWAN 377
            M  KS+IQDMR E+GSISR+GFDV+ G  RSRS RVVQD  + V      DAFK SCWA+
Sbjct: 1    MSFKSLIQDMRGELGSISRKGFDVRFGYGRSRSQRVVQDTSVPV------DAFKQSCWAS 54

Query: 378  MPPELLRDVLKRIEESECDWPLRKHVISCAGVCRSWRGIVKEIVKLPEVSGKFTFPISLK 557
            MPPELLRDVL RIE+SE  WP RK+V+SCAGVCR+WR IVKEIV++PE+S K TFPISLK
Sbjct: 55   MPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLK 114

Query: 558  QPGPRDALLQCFIKRNRSTQTYHLYLGLTQALT--DNGKFLLAACKYRRPTCTDYIISLN 731
            QPGPR +L+QC+I RNRS QTY+LYLGL QA    D+GKFLLAA ++RRPTCTDYIISLN
Sbjct: 115  QPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLN 174

Query: 732  ADDMTKGSGTYIGKLRSNFLGTKFVIYDGQPPHAGATGTKSRSTRL-GLKRVSPRVPAGN 908
             DD+++GS TYIGKLRSNFLGTKF +YD QP + G   T++RS+RL  LK+VSPR+P+GN
Sbjct: 175  CDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGN 234

Query: 909  YAVAHVQYELNVLGSRGPRRMQCTMDAIPTNAIEPGGVVPTQTEFSLSNPDFFPSLPFFR 1088
            Y VAH+ YELNVLGSRGPRRMQC MDAIP +A+EPGG  PTQTE   SN D FPS  FFR
Sbjct: 235  YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFR 294

Query: 1089 SKSTRTESLLSGPL-ANPKEGMLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAS 1265
            SKS R ESL SGP  A  KEG+LVLKNKAPRWHEQLQCWCLNF GRVTVASVKNFQLVA+
Sbjct: 295  SKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAA 354

Query: 1266 PENGLTGQEQEKVLLQFGKVGKDLFTMDFRYPLSAFQAFAICLSSFDTKIACE 1424
            PENG  G E E V+LQFGKVGKD+FTMD++YP+SAFQAF ICLSSFDTKIACE
Sbjct: 355  PENGPAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 407


>ref|XP_002882136.1| hypothetical protein ARALYDRAFT_322431 [Arabidopsis lyrata subsp.
            lyrata] gi|297327975|gb|EFH58395.1| hypothetical protein
            ARALYDRAFT_322431 [Arabidopsis lyrata subsp. lyrata]
          Length = 407

 Score =  597 bits (1540), Expect = e-168
 Identities = 302/413 (73%), Positives = 341/413 (82%), Gaps = 6/413 (1%)
 Frame = +3

Query: 204  MPLKSIIQDMRSEIGSISRRGFDVK-GL-RSRSHRVVQDGGLVVVPLASIDAFKHSCWAN 377
            M  KS+IQDMR E+GSISR+GFDV+ G  RSRS RVVQD  + V      DAFK SCWAN
Sbjct: 1    MSFKSLIQDMRGELGSISRKGFDVRFGYGRSRSQRVVQDTSVPV------DAFKQSCWAN 54

Query: 378  MPPELLRDVLKRIEESECDWPLRKHVISCAGVCRSWRGIVKEIVKLPEVSGKFTFPISLK 557
            MPPELLRDVL RIE SE  WP RK+V+SCAGVCR+WR IVKEIVK+PEVS K TFPISLK
Sbjct: 55   MPPELLRDVLMRIELSEDTWPSRKNVVSCAGVCRNWREIVKEIVKVPEVSSKLTFPISLK 114

Query: 558  QPGPRDALLQCFIKRNRSTQTYHLYLGLTQALT--DNGKFLLAACKYRRPTCTDYIISLN 731
            QPGPR +L+QC+I RNRS QTY+LYLGL QA    D+GKFLLAA ++RRPTCTDYIISLN
Sbjct: 115  QPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLN 174

Query: 732  ADDMTKGSGTYIGKLRSNFLGTKFVIYDGQPPHAGATGTKSRSTRL-GLKRVSPRVPAGN 908
             DD+++GS TYIGKLRSNFLGTKF ++D QP + G   T++RS+RL  LK+VSPR+P+GN
Sbjct: 175  CDDVSRGSNTYIGKLRSNFLGTKFTVFDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGN 234

Query: 909  YAVAHVQYELNVLGSRGPRRMQCTMDAIPTNAIEPGGVVPTQTEFSLSNPDFFPSLPFFR 1088
            Y VAH+ YELNVLGSRGPRRMQC MDAIP +A+EPGG  PTQTE   SN + FPS  FFR
Sbjct: 235  YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELIHSNLENFPSFSFFR 294

Query: 1089 SKSTRTESLLSGPL-ANPKEGMLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAS 1265
            SKS R ESL SGP  A  KEG+LVLKNKAPRWHEQLQCWCLNF GRVTVASVKNFQLVA+
Sbjct: 295  SKSIRAESLSSGPASAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAA 354

Query: 1266 PENGLTGQEQEKVLLQFGKVGKDLFTMDFRYPLSAFQAFAICLSSFDTKIACE 1424
            PENG  G E E V+LQFGKVGKD+FTMD++YP+SAFQAF ICLSSFDTKIACE
Sbjct: 355  PENGPAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 407