BLASTX nr result
ID: Coptis21_contig00008059
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00008059
(1614 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003536205.1| PREDICTED: U-box domain-containing protein 4... 458 e-126
ref|XP_003519704.1| PREDICTED: U-box domain-containing protein 4... 448 e-123
ref|XP_002527304.1| E3 ubiquitin ligase PUB14, putative [Ricinus... 441 e-121
ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|2... 439 e-121
gb|ABK94871.1| unknown [Populus trichocarpa] 439 e-121
>ref|XP_003536205.1| PREDICTED: U-box domain-containing protein 44-like [Glycine max]
Length = 1014
Score = 458 bits (1179), Expect = e-126
Identities = 239/437 (54%), Positives = 303/437 (69%)
Frame = +3
Query: 3 LVKLSSCRENKKLIAAAGGVPLILENFLSCHVRTMIISKCCEILEKLSSDDDGTEFLVDA 182
LVKL+ NK +IAA+GGVPLI++ S RT+II KC EI+EKLSSD DG +F VD
Sbjct: 569 LVKLAGSHANKGIIAASGGVPLIIDLMFSPQSRTLIIIKCSEIIEKLSSDGDGIDFFVDG 628
Query: 183 DGNFVEIDQIVXXXXXXXXXXXXSCTIRKPALCALLGICKSQERNSVKAVVSANGVSIIL 362
+G +E+D I+ IRKPAL ALLGICK + KA+++ANGVS+IL
Sbjct: 629 EGKQLELDSIIANLLALQQTSNSGHNIRKPALSALLGICKFETGLVKKAILAANGVSLIL 688
Query: 363 PLLDYSDQEIQEVSISLLYCFSQYETEGIVQFLLMQQRLDTFMRFLKDDSRRNAQIAAVG 542
PLLD SD EI+E SI LL+ FSQ+E EG+V++L +RL+ + FL+++ N QIAA G
Sbjct: 689 PLLDDSDSEIRETSIILLFLFSQHEPEGVVEYLFRPRRLEALIGFLENEENANVQIAAAG 748
Query: 543 LLANLPKSETELTKKLIEIGGLPEILKILSAGTMEAKENALGALFRFTDPTNVEFQRMVV 722
LLANLPKSE ELT KLIE+GGL I+ IL G MEAKENAL ALFRFTDPTN+E QR +V
Sbjct: 749 LLANLPKSERELTMKLIELGGLDAIISILKTGKMEAKENALTALFRFTDPTNIESQRDLV 808
Query: 723 DLGVYPSLLSLLXXXXXXXXXXXXXLIGTLSLSSPKLAVISKPTSCWCFRNNHPSMCGAH 902
G+YP L+ L IG LS+S+PKL V+ KPT CW FR++ +C AH
Sbjct: 809 KRGIYPLLVDFLNTGSVTAKARAAAFIGDLSMSTPKLTVVPKPTGCWLFRSSRVPLCSAH 868
Query: 903 GGICSITSTFCLLKANVLPELVALLHEKVHATTYEALQALLTLVCEDKHHRGANVLHTAK 1082
G +CS+ +TFCLL+A LP L+ LLH +VHAT EA+Q L TLV ED RGA VLH
Sbjct: 869 GSVCSVNTTFCLLEAKALPGLIKLLHGEVHATACEAIQTLSTLVLEDFPQRGARVLHEYN 928
Query: 1083 AISPILEVLDWGTPSLKEEALGVLEKVLVTKDMVDLYGACASPRLVGLTTMNIDGNDRLK 1262
AI I+++L+WGT SLK EALG+LEKV V+K+MV+ YG A RL+GLT MNI G+ L+
Sbjct: 929 AIRSIMDILNWGTDSLKAEALGLLEKVFVSKEMVEYYGTTARSRLIGLTGMNIYGDGHLR 988
Query: 1263 KQATKVLTQLERHSRPS 1313
++A KVL+ LER+S+ S
Sbjct: 989 RKAAKVLSLLERYSKSS 1005
>ref|XP_003519704.1| PREDICTED: U-box domain-containing protein 43-like [Glycine max]
Length = 1018
Score = 448 bits (1152), Expect = e-123
Identities = 233/444 (52%), Positives = 308/444 (69%), Gaps = 3/444 (0%)
Frame = +3
Query: 3 LVKLSSCRENKKLIAAAGGVPLILENFLSCHVRTMIISKCCEILEKLSSDDDGTEFLVDA 182
LVKL+ NK +IAA+GGVPL+L+ C +R I KCCEILEKL+SDDDG +FLVD
Sbjct: 571 LVKLAKLHANKGIIAASGGVPLVLDLMFFCRMRPFITIKCCEILEKLASDDDGIDFLVDG 630
Query: 183 DGNFVEIDQIVXXXXXXXXXXXXSCTIRKPALCALLGICKSQERNSVKAVVSANGVSIIL 362
GN +E++ I+ S RKPAL ALLGICK + KAV++ANG+S+IL
Sbjct: 631 KGNQLELENIITNLLALTQGPN-SAHYRKPALRALLGICKFETGLVKKAVLAANGISLIL 689
Query: 363 PLLDYSDQEIQEVSISLLYCFSQYETEGIVQFLLMQQRLDTFMRFLKDDSRRNAQIAAVG 542
P+LD SD EI+E +I++L+ FSQ+E +G+V++L +RL + FL++D + Q+AA G
Sbjct: 690 PILDDSDSEIRETAINILFLFSQHEPQGLVEYLFSPRRLQALVGFLENDDNDDVQMAAAG 749
Query: 543 LLANLPKSETELTKKLIEIGGLPEILKILSAGTMEAKENALGALFRFTDPTNVEFQRMVV 722
LLANLPKSE ELT +LI++GGL IL IL GTMEAKENAL ALFRFTDPTN+E Q +V
Sbjct: 750 LLANLPKSERELTMELIDLGGLDAILSILKNGTMEAKENALSALFRFTDPTNIESQHDLV 809
Query: 723 DLGVYPSLLSLLXXXXXXXXXXXXXLIGTLSLSSPKLAVISKPTSC---WCFRNNHPSMC 893
G+YP L++ L IG LS+S+PKL +SK T C WCFR + +C
Sbjct: 810 KRGLYPLLVNFLNTGSVTAKARAAAFIGDLSMSTPKLTAVSKSTGCTRWWCFRPSKVPLC 869
Query: 894 GAHGGICSITSTFCLLKANVLPELVALLHEKVHATTYEALQALLTLVCEDKHHRGANVLH 1073
AHG +CS++STFCLL+AN LP L+ LLH +VHAT YEA+Q L TLV ED RGA VLH
Sbjct: 870 SAHGSVCSVSSTFCLLEANALPGLIRLLHGEVHATAYEAIQTLSTLVLEDFPQRGARVLH 929
Query: 1074 TAKAISPILEVLDWGTPSLKEEALGVLEKVLVTKDMVDLYGACASPRLVGLTTMNIDGND 1253
+ A+ P+LE+L+WGT SLK EA+G+LEKV V+K+MV+ YG A L+GLT + + G+
Sbjct: 930 ESNAMRPLLEILNWGTDSLKSEAIGLLEKVFVSKEMVEYYGTRARLSLLGLTGITVYGDG 989
Query: 1254 RLKKQATKVLTQLERHSRPSLRIF 1325
L+++A +VL+ LER+S+ S F
Sbjct: 990 HLRRKAARVLSLLERYSKSSSSAF 1013
>ref|XP_002527304.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
gi|223533304|gb|EEF35056.1| E3 ubiquitin ligase PUB14,
putative [Ricinus communis]
Length = 1017
Score = 441 bits (1135), Expect = e-121
Identities = 230/438 (52%), Positives = 303/438 (69%), Gaps = 1/438 (0%)
Frame = +3
Query: 3 LVKLSSCRENKKLIAAAGGVPLILENFLSCHVRTMIISKCCEILEKLSSDDDGTEFLVDA 182
LVKLS C NK+LI+A GG+PL+L+ S H+RT+II KC EILEK SSDD G +FLVD
Sbjct: 571 LVKLSDCHANKELISAGGGLPLVLKLMFSAHIRTIIIVKCAEILEKFSSDDAGIKFLVDE 630
Query: 183 DGNFVEIDQIVXXXXXXXXXXXXSCTIRKPALCALLGICKSQERNSVKAVVSANGVSIIL 362
+ N +E++ I+ S +R+PAL ALLGICK + AV++ANGVS+IL
Sbjct: 631 NQNQLELEPIITNLLALQQGLSSSHNVRRPALRALLGICKFEAGLVKTAVLTANGVSLIL 690
Query: 363 PLLDYSDQEIQEVSISLLYCFSQYETEGIVQFLLMQQRLDTFMRFLKDDSRRNAQIAAVG 542
PLLD +D EI+E +I+LL+ FS +E +G+V++LL +RL+ + FL+ D + + Q AA G
Sbjct: 691 PLLDDTDLEIRETAINLLFLFSHHEPQGVVEYLLKPKRLEALVGFLESDDKSDVQKAAAG 750
Query: 543 LLANLPKSETELTKKLIEIGGLPEILKILSAGTMEAKENALGALFRFTDPTNVEFQRMVV 722
LL+NLPKSE LT KLIE+ GL ++ ++ GTMEAKENAL ALFRFTDP N+E QR+VV
Sbjct: 751 LLSNLPKSEVPLTMKLIELDGLNALITLIRTGTMEAKENALSALFRFTDPANIESQRIVV 810
Query: 723 DLGVYPSLLSLLXXXXXXXXXXXXXLIGTLSLSSPKLAVISKPTSCWCFRNNHPSMCGAH 902
+ G YP L++LL LIG LS+SSPKL V+ KPT WCFR P +C H
Sbjct: 811 EQGAYPMLVNLLRTGSVMAKARAAALIGDLSMSSPKLVVVPKPTCFWCFRPTRPHLCPVH 870
Query: 903 GGICSITSTFCLLKANVLPELVALLHEKVHATTYEALQALLTLVCEDKHHRGANVLHTAK 1082
GGICS+ +TFCL++AN LP LV LLH +V AT +EA+Q L TLV RGAN LH
Sbjct: 871 GGICSVKTTFCLMEANALPALVELLHGEVDATAHEAIQTLSTLVQHGCPSRGANALHEHD 930
Query: 1083 AISPILEVLDWGTPSLKEEALGVLEKVLVTKDMVDLYGACASPRLVGLTTMNI-DGNDRL 1259
AI P++++L WGT SLKEEALG+LEKV ++K++VD Y + A RLV LT N+ + N ++
Sbjct: 931 AIKPVVDILSWGTNSLKEEALGLLEKVFLSKEVVDYYKSAARLRLVSLTGQNVHEDNSQI 990
Query: 1260 KKQATKVLTQLERHSRPS 1313
++A VL LER+SR S
Sbjct: 991 GRKAASVLLLLERYSRSS 1008
>ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|222863699|gb|EEF00830.1|
predicted protein [Populus trichocarpa]
Length = 1032
Score = 439 bits (1130), Expect = e-121
Identities = 227/437 (51%), Positives = 300/437 (68%)
Frame = +3
Query: 3 LVKLSSCRENKKLIAAAGGVPLILENFLSCHVRTMIISKCCEILEKLSSDDDGTEFLVDA 182
LVKLS C NK+LIAAAGG+PL++ S H+R+MII KC EILEK S DDDG +F +D
Sbjct: 587 LVKLSDCAANKELIAAAGGLPLVITLMFSAHMRSMIIVKCSEILEKFSCDDDGIKFFIDE 646
Query: 183 DGNFVEIDQIVXXXXXXXXXXXXSCTIRKPALCALLGICKSQERNSVKAVVSANGVSIIL 362
+G +E++ IV S +R+PAL LLGICK AV++A GVS++L
Sbjct: 647 NGAQLELEPIVSDLLALQQIAHSSQNVRRPALRTLLGICKFDAGLVKTAVLTAKGVSLVL 706
Query: 363 PLLDYSDQEIQEVSISLLYCFSQYETEGIVQFLLMQQRLDTFMRFLKDDSRRNAQIAAVG 542
PLLD +D EI+E++I+LL+ FS +E +G+V++LL +RL+ + FL++D + + Q+AA G
Sbjct: 707 PLLDDTDSEIREIAINLLFLFSHHEPQGVVEYLLKPKRLEALVGFLENDDKSDVQMAAAG 766
Query: 543 LLANLPKSETELTKKLIEIGGLPEILKILSAGTMEAKENALGALFRFTDPTNVEFQRMVV 722
LLANLPKSE +T KLI++ GL ++KI+ GTMEAKENAL ALFRFTDP N E QR+VV
Sbjct: 767 LLANLPKSEVSVTTKLIDLDGLNALIKIIRTGTMEAKENALSALFRFTDPANPETQRIVV 826
Query: 723 DLGVYPSLLSLLXXXXXXXXXXXXXLIGTLSLSSPKLAVISKPTSCWCFRNNHPSMCGAH 902
+ G YP ++LL LIG LS SSPKL V+SK T CWCFR P +C AH
Sbjct: 827 EQGAYPLFVNLLTTGSVMAKARAAALIGDLSRSSPKLVVVSKATGCWCFRPTRPHLCPAH 886
Query: 903 GGICSITSTFCLLKANVLPELVALLHEKVHATTYEALQALLTLVCEDKHHRGANVLHTAK 1082
GGICS+ +TFCL++A LP LV LL +VH +EA+Q L TLV E +RGANVLH A
Sbjct: 887 GGICSVKTTFCLIEATALPVLVKLLQGEVHVIAHEAIQTLSTLVQEGSPNRGANVLHEAD 946
Query: 1083 AISPILEVLDWGTPSLKEEALGVLEKVLVTKDMVDLYGACASPRLVGLTTMNIDGNDRLK 1262
AI P+L++ WGT SLKEEALG+LEKV ++++MV+ YG A LVG+ N + R+
Sbjct: 947 AIKPVLDIFTWGTDSLKEEALGLLEKVFLSREMVEHYGPSARLILVGMPGRNGHEDSRMG 1006
Query: 1263 KQATKVLTQLERHSRPS 1313
++ KVL+ LER+SR S
Sbjct: 1007 RRVAKVLSLLERYSRSS 1023
>gb|ABK94871.1| unknown [Populus trichocarpa]
Length = 660
Score = 439 bits (1130), Expect = e-121
Identities = 227/437 (51%), Positives = 300/437 (68%)
Frame = +3
Query: 3 LVKLSSCRENKKLIAAAGGVPLILENFLSCHVRTMIISKCCEILEKLSSDDDGTEFLVDA 182
LVKLS C NK+LIAAAGG+PL++ S H+R+MII KC EILEK S DDDG +F +D
Sbjct: 215 LVKLSDCAANKELIAAAGGLPLVITLMFSAHMRSMIIVKCSEILEKFSCDDDGIKFFIDE 274
Query: 183 DGNFVEIDQIVXXXXXXXXXXXXSCTIRKPALCALLGICKSQERNSVKAVVSANGVSIIL 362
+G +E++ IV S +R+PAL LLGICK AV++A GVS++L
Sbjct: 275 NGAQLELEPIVSDLLALQQIAHSSQNVRRPALRTLLGICKFDAGLVKTAVLTAKGVSLVL 334
Query: 363 PLLDYSDQEIQEVSISLLYCFSQYETEGIVQFLLMQQRLDTFMRFLKDDSRRNAQIAAVG 542
PLLD +D EI+E++I+LL+ FS +E +G+V++LL +RL+ + FL++D + + Q+AA G
Sbjct: 335 PLLDDTDSEIREIAINLLFLFSHHEPQGVVEYLLKPKRLEALVGFLENDDKSDVQMAAAG 394
Query: 543 LLANLPKSETELTKKLIEIGGLPEILKILSAGTMEAKENALGALFRFTDPTNVEFQRMVV 722
LLANLPKSE +T KLI++ GL ++KI+ GTMEAKENAL ALFRFTDP N E QR+VV
Sbjct: 395 LLANLPKSEVSVTTKLIDLDGLNALIKIIRTGTMEAKENALSALFRFTDPANPETQRIVV 454
Query: 723 DLGVYPSLLSLLXXXXXXXXXXXXXLIGTLSLSSPKLAVISKPTSCWCFRNNHPSMCGAH 902
+ G YP ++LL LIG LS SSPKL V+SK T CWCFR P +C AH
Sbjct: 455 EQGAYPLFVNLLTTGSVMAKARAAALIGDLSRSSPKLVVVSKATGCWCFRPTRPHLCPAH 514
Query: 903 GGICSITSTFCLLKANVLPELVALLHEKVHATTYEALQALLTLVCEDKHHRGANVLHTAK 1082
GGICS+ +TFCL++A LP LV LL +VH +EA+Q L TLV E +RGANVLH A
Sbjct: 515 GGICSVKTTFCLIEATALPVLVKLLQGEVHVIAHEAIQTLSTLVQEGSPNRGANVLHEAD 574
Query: 1083 AISPILEVLDWGTPSLKEEALGVLEKVLVTKDMVDLYGACASPRLVGLTTMNIDGNDRLK 1262
AI P+L++ WGT SLKEEALG+LEKV ++++MV+ YG A LVG+ N + R+
Sbjct: 575 AIKPVLDIFTWGTDSLKEEALGLLEKVFLSREMVEHYGPSARLILVGMPGRNGHEDSRMG 634
Query: 1263 KQATKVLTQLERHSRPS 1313
++ KVL+ LER+SR S
Sbjct: 635 RRVAKVLSLLERYSRSS 651