BLASTX nr result
ID: Coptis21_contig00008050
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00008050
(1764 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001168050.1| FAR1-domain family sequence [Zea mays] gi|22... 125 3e-26
tpg|DAA63143.1| TPA: FAR1-domain family sequence [Zea mays] 124 6e-26
ref|XP_002460862.1| hypothetical protein SORBIDRAFT_02g036450 [S... 122 3e-25
gb|EEE67416.1| hypothetical protein OsJ_24749 [Oryza sativa Japo... 122 3e-25
ref|NP_001059997.1| Os07g0563600 [Oryza sativa Japonica Group] g... 122 3e-25
>ref|NP_001168050.1| FAR1-domain family sequence [Zea mays] gi|223945697|gb|ACN26932.1|
unknown [Zea mays] gi|414887130|tpg|DAA63144.1| TPA:
FAR1-domain family sequence [Zea mays]
Length = 899
Score = 125 bits (315), Expect = 3e-26
Identities = 87/275 (31%), Positives = 125/275 (45%), Gaps = 6/275 (2%)
Frame = -1
Query: 1698 HRGVFYLSQKMGNDGCNSEDGCNDAKSSLIPVVGMLFXXXXXXXXXXXXXXXNVGFSVRK 1519
H+ V L D + D C++ ++P V MLF VGF VR+
Sbjct: 71 HQNVDALEDVAAADVNPAIDSCDE---KMLPKVNMLFDGESDAYEFYNAYAEKVGFFVRR 127
Query: 1518 KTMYSDSKGIVRRRDLCCSWEGNYQMKAQPKKR---REDRRCGCPAMLMVKLNEDGKYVV 1348
T+++ SK I+ RR CS EG + K K+ R + R GCPA L ++L +GKY +
Sbjct: 128 STLWTTSKNIITRRTFVCSREGFREKKKGAKEAKCPRPETRIGCPASLTIRLTANGKYRL 187
Query: 1347 TSFVEEHNHSLENPKNAHKLRSHRQLEPSLQMAIKSQLSKEVQDSLDNDANDECFNISNL 1168
T FV HNH L H L++ ++ ++ + + +N A+D
Sbjct: 188 TEFVPNHNHQLATASTVHMLKT-------------KKIRRKARAARENLADD-------- 226
Query: 1167 VPVVGMVFTTDMEAYNFYNRYAKKAGFSVRKKTSYCNSNGKVKRRDLCCSLEGICQ---X 997
V F + EAY FY+ YA K GFSVR+ + N+ + RR CS EG +
Sbjct: 227 -TVSTPEFENEDEAYEFYSMYAGKIGFSVRRASMTVNNENVITRRMFVCSKEGFREKKRG 285
Query: 996 XXXXXXXXXXXRCGCEAMLIVRLDENEKYVVTSFV 892
R GC A +++RL NEKY VT FV
Sbjct: 286 AKRVKKPRPETRTGCPACMVIRLGTNEKYQVTEFV 320
Score = 63.5 bits (153), Expect = 2e-07
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Frame = -1
Query: 1539 VGFSVRKKTMYSDSKGIVRRRDLCCSWEGNYQMKA---QPKKRREDRRCGCPAMLMVKLN 1369
+GFSVR+ +M +++ ++ RR CS EG + K + KK R + R GCPA ++++L
Sbjct: 250 IGFSVRRASMTVNNENVITRRMFVCSKEGFREKKRGAKRVKKPRPETRTGCPACMVIRLG 309
Query: 1368 EDGKYVVTSFVEEHNHSL 1315
+ KY VT FV HNH L
Sbjct: 310 TNEKYQVTEFVTCHNHQL 327
>tpg|DAA63143.1| TPA: FAR1-domain family sequence [Zea mays]
Length = 956
Score = 124 bits (312), Expect = 6e-26
Identities = 83/256 (32%), Positives = 119/256 (46%), Gaps = 6/256 (2%)
Frame = -1
Query: 1641 DGCNDAKSSLIPVVGMLFXXXXXXXXXXXXXXXNVGFSVRKKTMYSDSKGIVRRRDLCCS 1462
D C++ ++P V MLF VGF VR+ T+++ SK I+ RR CS
Sbjct: 147 DSCDE---KMLPKVNMLFDGESDAYEFYNAYAEKVGFFVRRSTLWTTSKNIITRRTFVCS 203
Query: 1461 WEGNYQMKAQPKKR---REDRRCGCPAMLMVKLNEDGKYVVTSFVEEHNHSLENPKNAHK 1291
EG + K K+ R + R GCPA L ++L +GKY +T FV HNH L H
Sbjct: 204 REGFREKKKGAKEAKCPRPETRIGCPASLTIRLTANGKYRLTEFVPNHNHQLATASTVHM 263
Query: 1290 LRSHRQLEPSLQMAIKSQLSKEVQDSLDNDANDECFNISNLVPVVGMVFTTDMEAYNFYN 1111
L++ ++ ++ + + +N A+D V F + EAY FY+
Sbjct: 264 LKT-------------KKIRRKARAARENLADD---------TVSTPEFENEDEAYEFYS 301
Query: 1110 RYAKKAGFSVRKKTSYCNSNGKVKRRDLCCSLEGICQ---XXXXXXXXXXXXRCGCEAML 940
YA K GFSVR+ + N+ + RR CS EG + R GC A +
Sbjct: 302 MYAGKIGFSVRRASMTVNNENVITRRMFVCSKEGFREKKRGAKRVKKPRPETRTGCPACM 361
Query: 939 IVRLDENEKYVVTSFV 892
++RL NEKY VT FV
Sbjct: 362 VIRLGTNEKYQVTEFV 377
Score = 67.4 bits (163), Expect = 1e-08
Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = -1
Query: 1206 NDANDECFNISNLVPVVGMVFTTDMEAYNFYNRYAKKAGFSVRKKTSYCNSNGKVKRRDL 1027
N A D C ++P V M+F + +AY FYN YA+K GF VR+ T + S + RR
Sbjct: 143 NPAIDSCDE--KMLPKVNMLFDGESDAYEFYNAYAEKVGFFVRRSTLWTTSKNIITRRTF 200
Query: 1026 CCSLEGICQ---XXXXXXXXXXXXRCGCEAMLIVRLDENEKYVVTSFV 892
CS EG + R GC A L +RL N KY +T FV
Sbjct: 201 VCSREGFREKKKGAKEAKCPRPETRIGCPASLTIRLTANGKYRLTEFV 248
Score = 63.5 bits (153), Expect = 2e-07
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Frame = -1
Query: 1539 VGFSVRKKTMYSDSKGIVRRRDLCCSWEGNYQMKA---QPKKRREDRRCGCPAMLMVKLN 1369
+GFSVR+ +M +++ ++ RR CS EG + K + KK R + R GCPA ++++L
Sbjct: 307 IGFSVRRASMTVNNENVITRRMFVCSKEGFREKKRGAKRVKKPRPETRTGCPACMVIRLG 366
Query: 1368 EDGKYVVTSFVEEHNHSL 1315
+ KY VT FV HNH L
Sbjct: 367 TNEKYQVTEFVTCHNHQL 384
>ref|XP_002460862.1| hypothetical protein SORBIDRAFT_02g036450 [Sorghum bicolor]
gi|241924239|gb|EER97383.1| hypothetical protein
SORBIDRAFT_02g036450 [Sorghum bicolor]
Length = 899
Score = 122 bits (306), Expect = 3e-25
Identities = 82/256 (32%), Positives = 118/256 (46%), Gaps = 6/256 (2%)
Frame = -1
Query: 1641 DGCNDAKSSLIPVVGMLFXXXXXXXXXXXXXXXNVGFSVRKKTMYSDSKGIVRRRDLCCS 1462
D C++ ++P V MLF VGF VR+ T+++ SK I+ RR CS
Sbjct: 90 DSCDE---KMLPKVNMLFDGESDAYEFYNAYAEKVGFFVRRSTLWTTSKNIITRRTFVCS 146
Query: 1461 WEGNYQMKAQPKKR---REDRRCGCPAMLMVKLNEDGKYVVTSFVEEHNHSLENPKNAHK 1291
EG + K K+ R + R GCPA L ++L +GKY +T FV HNH L H
Sbjct: 147 REGFREKKKGAKEAKCPRPETRIGCPASLTIRLTANGKYRLTEFVPNHNHQLATASTVHM 206
Query: 1290 LRSHRQLEPSLQMAIKSQLSKEVQDSLDNDANDECFNISNLVPVVGMVFTTDMEAYNFYN 1111
L++ ++ ++ + + +N A+D V F + EAY FY+
Sbjct: 207 LKA-------------KEIRRKARAARENLADD---------TVSTPEFENEDEAYEFYS 244
Query: 1110 RYAKKAGFSVRKKTSYCNSNGKVKRRDLCCSLEGICQ---XXXXXXXXXXXXRCGCEAML 940
YA K GFSVR+ + N+ + RR CS EG + R GC A +
Sbjct: 245 MYAGKIGFSVRRASMTVNTENVITRRMFVCSKEGFREKKRGAKRVKNPRPETRTGCPACM 304
Query: 939 IVRLDENEKYVVTSFV 892
++RL N KY VT FV
Sbjct: 305 VIRLGTNGKYQVTEFV 320
Score = 67.4 bits (163), Expect = 1e-08
Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = -1
Query: 1206 NDANDECFNISNLVPVVGMVFTTDMEAYNFYNRYAKKAGFSVRKKTSYCNSNGKVKRRDL 1027
N A D C ++P V M+F + +AY FYN YA+K GF VR+ T + S + RR
Sbjct: 86 NPAIDSCDE--KMLPKVNMLFDGESDAYEFYNAYAEKVGFFVRRSTLWTTSKNIITRRTF 143
Query: 1026 CCSLEGICQ---XXXXXXXXXXXXRCGCEAMLIVRLDENEKYVVTSFV 892
CS EG + R GC A L +RL N KY +T FV
Sbjct: 144 VCSREGFREKKKGAKEAKCPRPETRIGCPASLTIRLTANGKYRLTEFV 191
Score = 64.7 bits (156), Expect = 8e-08
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Frame = -1
Query: 1539 VGFSVRKKTMYSDSKGIVRRRDLCCSWEGNYQMKAQPKKRREDR---RCGCPAMLMVKLN 1369
+GFSVR+ +M +++ ++ RR CS EG + K K+ + R R GCPA ++++L
Sbjct: 250 IGFSVRRASMTVNTENVITRRMFVCSKEGFREKKRGAKRVKNPRPETRTGCPACMVIRLG 309
Query: 1368 EDGKYVVTSFVEEHNHSL 1315
+GKY VT FV HNH L
Sbjct: 310 TNGKYQVTEFVTCHNHQL 327
>gb|EEE67416.1| hypothetical protein OsJ_24749 [Oryza sativa Japonica Group]
Length = 605
Score = 122 bits (306), Expect = 3e-25
Identities = 85/257 (33%), Positives = 121/257 (47%), Gaps = 8/257 (3%)
Frame = -1
Query: 1638 GCNDAKSSLIPVVGMLFXXXXXXXXXXXXXXXNVGFSVRKKTMYSDSKGIVRRRDLCCSW 1459
GC D K ++P V MLF VGF VR+ T+++ SK I+ RR CS
Sbjct: 94 GCCDEK--MLPKVDMLFDGEKEAYDFYNAYAEMVGFFVRRSTLWTTSKNIITRRTFVCSR 151
Query: 1458 EGNYQMKAQPKKR---REDRRCGCPAMLMVKLNEDGKYVVTSFVEEHNHSLENPKNAHKL 1288
EG + K K+ R + R GCPA + ++LN +GKY +T FV HNH L H L
Sbjct: 152 EGFREKKRGTKEAKCPRPETRIGCPASMTIRLNTNGKYRLTEFVPNHNHQLATASTMHML 211
Query: 1287 RSHRQLEPSLQMAIKSQLSKEVQDSLDNDANDECFNISNLV--PVVGMVFTTDMEAYNFY 1114
++ + + +K++ ++E NLV V F ++ EAY FY
Sbjct: 212 KAKK-------IRLKARAARE-----------------NLVDDTVRTPEFGSEDEAYEFY 247
Query: 1113 NRYAKKAGFSVRKKTSYCNSNGKVKRRDLCCSLEGICQ---XXXXXXXXXXXXRCGCEAM 943
+ YA K GF+VR+ + N+ + RR CS EG + R GC A
Sbjct: 248 SMYAGKIGFNVRRASMTMNAENVITRRMFVCSKEGFREKKRGAKRVKKPRPETRTGCPAC 307
Query: 942 LIVRLDENEKYVVTSFV 892
+++RL N KY VT FV
Sbjct: 308 MVIRLTSNGKYHVTEFV 324
Score = 67.0 bits (162), Expect = 2e-08
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Frame = -1
Query: 1539 VGFSVRKKTMYSDSKGIVRRRDLCCSWEGNYQMKA---QPKKRREDRRCGCPAMLMVKLN 1369
+GF+VR+ +M +++ ++ RR CS EG + K + KK R + R GCPA ++++L
Sbjct: 254 IGFNVRRASMTMNAENVITRRMFVCSKEGFREKKRGAKRVKKPRPETRTGCPACMVIRLT 313
Query: 1368 EDGKYVVTSFVEEHNHSLENPKNAHKLRSHRQLEPSLQMAIKSQLSKEVQDSLDNDANDE 1189
+GKY VT FV HNH L PS +A D LD
Sbjct: 314 SNGKYHVTEFVTFHNHQL------------GATVPSDLVATSQSTETGQDDGLDLVDGSA 361
Query: 1188 CFNISNLVPVVGMVFTTDME 1129
NI ++G + T +E
Sbjct: 362 DANIHRQNLIIGNIMATSLE 381
>ref|NP_001059997.1| Os07g0563600 [Oryza sativa Japonica Group]
gi|23617207|dbj|BAC20878.1| putative far-red impaired
response protein [Oryza sativa Japonica Group]
gi|113611533|dbj|BAF21911.1| Os07g0563600 [Oryza sativa
Japonica Group]
Length = 903
Score = 122 bits (306), Expect = 3e-25
Identities = 85/257 (33%), Positives = 121/257 (47%), Gaps = 8/257 (3%)
Frame = -1
Query: 1638 GCNDAKSSLIPVVGMLFXXXXXXXXXXXXXXXNVGFSVRKKTMYSDSKGIVRRRDLCCSW 1459
GC D K ++P V MLF VGF VR+ T+++ SK I+ RR CS
Sbjct: 94 GCCDEK--MLPKVDMLFDGEKEAYDFYNAYAEMVGFFVRRSTLWTTSKNIITRRTFVCSR 151
Query: 1458 EGNYQMKAQPKKR---REDRRCGCPAMLMVKLNEDGKYVVTSFVEEHNHSLENPKNAHKL 1288
EG + K K+ R + R GCPA + ++LN +GKY +T FV HNH L H L
Sbjct: 152 EGFREKKRGTKEAKCPRPETRIGCPASMTIRLNTNGKYRLTEFVPNHNHQLATASTMHML 211
Query: 1287 RSHRQLEPSLQMAIKSQLSKEVQDSLDNDANDECFNISNLV--PVVGMVFTTDMEAYNFY 1114
++ + + +K++ ++E NLV V F ++ EAY FY
Sbjct: 212 KAKK-------IRLKARAARE-----------------NLVDDTVRTPEFGSEDEAYEFY 247
Query: 1113 NRYAKKAGFSVRKKTSYCNSNGKVKRRDLCCSLEGICQ---XXXXXXXXXXXXRCGCEAM 943
+ YA K GF+VR+ + N+ + RR CS EG + R GC A
Sbjct: 248 SMYAGKIGFNVRRASMTMNAENVITRRMFVCSKEGFREKKRGAKRVKKPRPETRTGCPAC 307
Query: 942 LIVRLDENEKYVVTSFV 892
+++RL N KY VT FV
Sbjct: 308 MVIRLTSNGKYHVTEFV 324
Score = 67.0 bits (162), Expect = 2e-08
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Frame = -1
Query: 1539 VGFSVRKKTMYSDSKGIVRRRDLCCSWEGNYQMKA---QPKKRREDRRCGCPAMLMVKLN 1369
+GF+VR+ +M +++ ++ RR CS EG + K + KK R + R GCPA ++++L
Sbjct: 254 IGFNVRRASMTMNAENVITRRMFVCSKEGFREKKRGAKRVKKPRPETRTGCPACMVIRLT 313
Query: 1368 EDGKYVVTSFVEEHNHSLENPKNAHKLRSHRQLEPSLQMAIKSQLSKEVQDSLDNDANDE 1189
+GKY VT FV HNH L PS +A D LD
Sbjct: 314 SNGKYHVTEFVTFHNHQL------------GATVPSDLVATSQSTETGQDDGLDLVDGSA 361
Query: 1188 CFNISNLVPVVGMVFTTDME 1129
NI ++G + T +E
Sbjct: 362 DANIHRQNLIIGNIMATSLE 381