BLASTX nr result

ID: Coptis21_contig00008038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008038
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241560.1| uncharacterized protein LOC100814321 [Glycin...   135   1e-42
ref|XP_002264091.1| PREDICTED: putative deoxyribonuclease TATDN1...   137   5e-42
ref|XP_002524070.1| TatD DNase domain-containing deoxyribonuclea...   134   1e-41
gb|AFK49546.1| unknown [Lotus japonicus]                              132   2e-40
ref|XP_002323375.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-40

>ref|NP_001241560.1| uncharacterized protein LOC100814321 [Glycine max]
           gi|255648299|gb|ACU24602.1| unknown [Glycine max]
          Length = 319

 Score =  135 bits (341), Expect(2) = 1e-42
 Identities = 62/71 (87%), Positives = 66/71 (92%)
 Frame = -3

Query: 506 IGVNGCSLKTPENLDVVRGIPVERMMIETDSPYCEIKSTHAGINFVKSVWPSKKKEKYNH 327
           IG+NGCSLKT ENLDVV+GIPVERMMIETDSPYCEIK+THAGI FVKS WPSKKKEKY+ 
Sbjct: 197 IGINGCSLKTTENLDVVKGIPVERMMIETDSPYCEIKNTHAGIGFVKSTWPSKKKEKYDQ 256

Query: 326 ESIVKGRNEPC 294
           E IVKGRNEPC
Sbjct: 257 ECIVKGRNEPC 267



 Score = 62.4 bits (150), Expect(2) = 1e-42
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -1

Query: 187 CKQIGDIGQLSKILHRNTCRVFFPHDLDSIADALLSGGS 71
           CK I D+  LS+ L+ NTCR+FFPHDLDS ADALL+GG+
Sbjct: 279 CKGINDVSNLSRTLYHNTCRIFFPHDLDSAADALLAGGN 317


>ref|XP_002264091.1| PREDICTED: putative deoxyribonuclease TATDN1 [Vitis vinifera]
           gi|296089369|emb|CBI39141.3| unnamed protein product
           [Vitis vinifera]
          Length = 320

 Score =  137 bits (344), Expect(2) = 5e-42
 Identities = 63/71 (88%), Positives = 67/71 (94%)
 Frame = -3

Query: 506 IGVNGCSLKTPENLDVVRGIPVERMMIETDSPYCEIKSTHAGINFVKSVWPSKKKEKYNH 327
           IGVNGCSLKT ENL+VVRGIPVER+MIETDSPYCEIK+THAGINFVKS+WPSKKKEKY  
Sbjct: 197 IGVNGCSLKTAENLEVVRGIPVERLMIETDSPYCEIKNTHAGINFVKSLWPSKKKEKYEQ 256

Query: 326 ESIVKGRNEPC 294
           E IVKGRNEPC
Sbjct: 257 ECIVKGRNEPC 267



 Score = 59.3 bits (142), Expect(2) = 5e-42
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = -1

Query: 187 CKQIGDIGQLSKILHRNTCRVFFPHDLDSIADALLSG 77
           CK + DI QLSK L+ NTCRVFFP DLDS ADALL+G
Sbjct: 279 CKGVSDIEQLSKTLYNNTCRVFFPQDLDSAADALLAG 315


>ref|XP_002524070.1| TatD DNase domain-containing deoxyribonuclease, putative [Ricinus
           communis] gi|223536638|gb|EEF38280.1| TatD DNase
           domain-containing deoxyribonuclease, putative [Ricinus
           communis]
          Length = 304

 Score =  134 bits (336), Expect(2) = 1e-41
 Identities = 62/71 (87%), Positives = 66/71 (92%)
 Frame = -3

Query: 506 IGVNGCSLKTPENLDVVRGIPVERMMIETDSPYCEIKSTHAGINFVKSVWPSKKKEKYNH 327
           IGVNGCSLKT ENLDVV+GIPVERMMIETDSPYCEIKSTHAGI+ VKS WPSKKKEKY+ 
Sbjct: 181 IGVNGCSLKTSENLDVVKGIPVERMMIETDSPYCEIKSTHAGISLVKSFWPSKKKEKYDQ 240

Query: 326 ESIVKGRNEPC 294
           + IVKGRNEPC
Sbjct: 241 DCIVKGRNEPC 251



 Score = 61.2 bits (147), Expect(2) = 1e-41
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = -1

Query: 187 CKQIGDIGQLSKILHRNTCRVFFPHDLDSIADALLSGGSDMQ 62
           CK +  I QLS+ ++ NTCRVFFPHDLDS ADALLSGG   Q
Sbjct: 263 CKGVVGIDQLSRTIYHNTCRVFFPHDLDSAADALLSGGPGAQ 304


>gb|AFK49546.1| unknown [Lotus japonicus]
          Length = 320

 Score =  132 bits (331), Expect(2) = 2e-40
 Identities = 60/71 (84%), Positives = 66/71 (92%)
 Frame = -3

Query: 506 IGVNGCSLKTPENLDVVRGIPVERMMIETDSPYCEIKSTHAGINFVKSVWPSKKKEKYNH 327
           IGVNGCSLKT ENLDVV+GIPVERMMIETDSPYCEIK+THAGI FV+S WPSKKKEK++ 
Sbjct: 198 IGVNGCSLKTTENLDVVKGIPVERMMIETDSPYCEIKNTHAGIGFVRSKWPSKKKEKHDQ 257

Query: 326 ESIVKGRNEPC 294
           E +VKGRNEPC
Sbjct: 258 ECVVKGRNEPC 268



 Score = 58.9 bits (141), Expect(2) = 2e-40
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -1

Query: 187 CKQIGDIGQLSKILHRNTCRVFFPHDLDSIADALLSG 77
           CK I D+  LS+ L+ NTCRVFFP DLDS+ADALLSG
Sbjct: 280 CKGINDVDDLSRTLYHNTCRVFFPQDLDSLADALLSG 316


>ref|XP_002323375.1| predicted protein [Populus trichocarpa] gi|222868005|gb|EEF05136.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  132 bits (331), Expect(2) = 3e-40
 Identities = 60/71 (84%), Positives = 65/71 (91%)
 Frame = -3

Query: 506 IGVNGCSLKTPENLDVVRGIPVERMMIETDSPYCEIKSTHAGINFVKSVWPSKKKEKYNH 327
           IGVNGCSLKTPENLDVV GIPVE+MMIETDSPYCEIK++HAGI FVKS WPSKKKEK+  
Sbjct: 181 IGVNGCSLKTPENLDVVSGIPVEKMMIETDSPYCEIKNSHAGIKFVKSTWPSKKKEKHEQ 240

Query: 326 ESIVKGRNEPC 294
           + IVKGRNEPC
Sbjct: 241 DCIVKGRNEPC 251



 Score = 58.2 bits (139), Expect(2) = 3e-40
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = -1

Query: 187 CKQIGDIGQLSKILHRNTCRVFFPHDLDSIADALLSGGSDMQ 62
           CK I +I Q+S+ ++ NTCRVFFP DLDS ADALLSG  D Q
Sbjct: 263 CKGITEIEQMSRTIYHNTCRVFFPQDLDSAADALLSGHLDSQ 304


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