BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008029
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|2...    43   4e-09
ref|XP_004145505.1| PREDICTED: transcription initiation factor T...    43   5e-09
ref|XP_002515435.1| protein with unknown function [Ricinus commu...    40   2e-08
gb|EEC81710.1| hypothetical protein OsI_25319 [Oryza sativa Indi...    40   3e-08
dbj|BAC79801.1| putative TATA box binding protein-associated fac...    40   3e-08

>ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|222866341|gb|EEF03472.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score = 43.1 bits (100), Expect(3) = 4e-09
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +2

Query: 119 SADCTVKLWDVTASTKAPKMDE 184
           SADCTVKLWDVT STKAP+ +E
Sbjct: 611 SADCTVKLWDVTTSTKAPRTEE 632



 Score = 39.3 bits (90), Expect(3) = 4e-09
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +3

Query: 297 GCTNRLRSLKTLPTKCSPVYTVQVNMR 377
           G TNRLR LKTLPTK +PVYT++ + R
Sbjct: 636 GNTNRLRLLKTLPTKSTPVYTLRFSRR 662



 Score = 24.6 bits (52), Expect(3) = 4e-09
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 470 FWVQFSRRNLLFAAVVL 520
           + ++FSRRNLLFAA  L
Sbjct: 655 YTLRFSRRNLLFAAGAL 671


>ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Cucumis sativus] gi|449485181|ref|XP_004157092.1|
           PREDICTED: transcription initiation factor TFIID subunit
           5-like [Cucumis sativus]
          Length = 674

 Score = 43.1 bits (100), Expect(3) = 5e-09
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +2

Query: 119 SADCTVKLWDVTASTKAPKMDE 184
           SADCTVKLWDVT+STK P+ DE
Sbjct: 607 SADCTVKLWDVTSSTKPPRTDE 628



 Score = 39.3 bits (90), Expect(3) = 5e-09
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = +3

Query: 291 RVGCTNRLRSLKTLPTKCSPVYTVQVNMR 377
           + G  NRLRSLKTLPTK +PVY+++ + R
Sbjct: 630 KTGTPNRLRSLKTLPTKSTPVYSLRFSRR 658



 Score = 24.3 bits (51), Expect(3) = 5e-09
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +2

Query: 476 VQFSRRNLLFAAVVL 520
           ++FSRRNLLFAA  L
Sbjct: 653 LRFSRRNLLFAAGAL 667


>ref|XP_002515435.1| protein with unknown function [Ricinus communis]
           gi|223545379|gb|EEF46884.1| protein with unknown
           function [Ricinus communis]
          Length = 670

 Score = 40.0 bits (92), Expect(3) = 2e-08
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +2

Query: 119 SADCTVKLWDVTASTKAPKMDE 184
           SADCTVKLWDVT+STK  K +E
Sbjct: 606 SADCTVKLWDVTSSTKVTKAEE 627



 Score = 38.9 bits (89), Expect(3) = 2e-08
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +3

Query: 297 GCTNRLRSLKTLPTKCSPVYTVQVNMR 377
           G  NRLRSLKTLPTK +PVY+++ + R
Sbjct: 631 GSANRLRSLKTLPTKSTPVYSLRFSRR 657



 Score = 25.8 bits (55), Expect(3) = 2e-08
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 476 VQFSRRNLLFAAVVL 520
           ++FSRRNLLFAA VL
Sbjct: 652 LRFSRRNLLFAAGVL 666


>gb|EEC81710.1| hypothetical protein OsI_25319 [Oryza sativa Indica Group]
           gi|222636641|gb|EEE66773.1| hypothetical protein
           OsJ_23498 [Oryza sativa Japonica Group]
          Length = 631

 Score = 40.0 bits (92), Expect(3) = 3e-08
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +2

Query: 119 SADCTVKLWDVTASTKAPKMDE 184
           SADCTVKLWDV +STK  KMD+
Sbjct: 567 SADCTVKLWDVASSTKTLKMDD 588



 Score = 38.1 bits (87), Expect(3) = 3e-08
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = +3

Query: 297 GCTNRLRSLKTLPTKCSPVYTVQVNMR 377
           G  NRLR LK LPTK +PVYT+Q + R
Sbjct: 592 GSANRLRMLKALPTKSTPVYTLQFSRR 618



 Score = 25.8 bits (55), Expect(3) = 3e-08
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +2

Query: 470 FWVQFSRRNLLFAA 511
           + +QFSRRNLLFAA
Sbjct: 611 YTLQFSRRNLLFAA 624


>dbj|BAC79801.1| putative TATA box binding protein-associated factor [Oryza sativa
           Japonica Group]
          Length = 563

 Score = 40.0 bits (92), Expect(3) = 3e-08
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +2

Query: 119 SADCTVKLWDVTASTKAPKMDE 184
           SADCTVKLWDV +STK  KMD+
Sbjct: 499 SADCTVKLWDVASSTKTLKMDD 520



 Score = 38.1 bits (87), Expect(3) = 3e-08
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = +3

Query: 297 GCTNRLRSLKTLPTKCSPVYTVQVNMR 377
           G  NRLR LK LPTK +PVYT+Q + R
Sbjct: 524 GSANRLRMLKALPTKSTPVYTLQFSRR 550



 Score = 25.8 bits (55), Expect(3) = 3e-08
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +2

Query: 470 FWVQFSRRNLLFAA 511
           + +QFSRRNLLFAA
Sbjct: 543 YTLQFSRRNLLFAA 556