BLASTX nr result
ID: Coptis21_contig00008029
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00008029 (970 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|2... 43 4e-09 ref|XP_004145505.1| PREDICTED: transcription initiation factor T... 43 5e-09 ref|XP_002515435.1| protein with unknown function [Ricinus commu... 40 2e-08 gb|EEC81710.1| hypothetical protein OsI_25319 [Oryza sativa Indi... 40 3e-08 dbj|BAC79801.1| putative TATA box binding protein-associated fac... 40 3e-08 >ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|222866341|gb|EEF03472.1| predicted protein [Populus trichocarpa] Length = 675 Score = 43.1 bits (100), Expect(3) = 4e-09 Identities = 18/22 (81%), Positives = 20/22 (90%) Frame = +2 Query: 119 SADCTVKLWDVTASTKAPKMDE 184 SADCTVKLWDVT STKAP+ +E Sbjct: 611 SADCTVKLWDVTTSTKAPRTEE 632 Score = 39.3 bits (90), Expect(3) = 4e-09 Identities = 18/27 (66%), Positives = 22/27 (81%) Frame = +3 Query: 297 GCTNRLRSLKTLPTKCSPVYTVQVNMR 377 G TNRLR LKTLPTK +PVYT++ + R Sbjct: 636 GNTNRLRLLKTLPTKSTPVYTLRFSRR 662 Score = 24.6 bits (52), Expect(3) = 4e-09 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +2 Query: 470 FWVQFSRRNLLFAAVVL 520 + ++FSRRNLLFAA L Sbjct: 655 YTLRFSRRNLLFAAGAL 671 >ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like [Cucumis sativus] gi|449485181|ref|XP_004157092.1| PREDICTED: transcription initiation factor TFIID subunit 5-like [Cucumis sativus] Length = 674 Score = 43.1 bits (100), Expect(3) = 5e-09 Identities = 18/22 (81%), Positives = 20/22 (90%) Frame = +2 Query: 119 SADCTVKLWDVTASTKAPKMDE 184 SADCTVKLWDVT+STK P+ DE Sbjct: 607 SADCTVKLWDVTSSTKPPRTDE 628 Score = 39.3 bits (90), Expect(3) = 5e-09 Identities = 17/29 (58%), Positives = 23/29 (79%) Frame = +3 Query: 291 RVGCTNRLRSLKTLPTKCSPVYTVQVNMR 377 + G NRLRSLKTLPTK +PVY+++ + R Sbjct: 630 KTGTPNRLRSLKTLPTKSTPVYSLRFSRR 658 Score = 24.3 bits (51), Expect(3) = 5e-09 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2 Query: 476 VQFSRRNLLFAAVVL 520 ++FSRRNLLFAA L Sbjct: 653 LRFSRRNLLFAAGAL 667 >ref|XP_002515435.1| protein with unknown function [Ricinus communis] gi|223545379|gb|EEF46884.1| protein with unknown function [Ricinus communis] Length = 670 Score = 40.0 bits (92), Expect(3) = 2e-08 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = +2 Query: 119 SADCTVKLWDVTASTKAPKMDE 184 SADCTVKLWDVT+STK K +E Sbjct: 606 SADCTVKLWDVTSSTKVTKAEE 627 Score = 38.9 bits (89), Expect(3) = 2e-08 Identities = 17/27 (62%), Positives = 22/27 (81%) Frame = +3 Query: 297 GCTNRLRSLKTLPTKCSPVYTVQVNMR 377 G NRLRSLKTLPTK +PVY+++ + R Sbjct: 631 GSANRLRSLKTLPTKSTPVYSLRFSRR 657 Score = 25.8 bits (55), Expect(3) = 2e-08 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = +2 Query: 476 VQFSRRNLLFAAVVL 520 ++FSRRNLLFAA VL Sbjct: 652 LRFSRRNLLFAAGVL 666 >gb|EEC81710.1| hypothetical protein OsI_25319 [Oryza sativa Indica Group] gi|222636641|gb|EEE66773.1| hypothetical protein OsJ_23498 [Oryza sativa Japonica Group] Length = 631 Score = 40.0 bits (92), Expect(3) = 3e-08 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = +2 Query: 119 SADCTVKLWDVTASTKAPKMDE 184 SADCTVKLWDV +STK KMD+ Sbjct: 567 SADCTVKLWDVASSTKTLKMDD 588 Score = 38.1 bits (87), Expect(3) = 3e-08 Identities = 17/27 (62%), Positives = 20/27 (74%) Frame = +3 Query: 297 GCTNRLRSLKTLPTKCSPVYTVQVNMR 377 G NRLR LK LPTK +PVYT+Q + R Sbjct: 592 GSANRLRMLKALPTKSTPVYTLQFSRR 618 Score = 25.8 bits (55), Expect(3) = 3e-08 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = +2 Query: 470 FWVQFSRRNLLFAA 511 + +QFSRRNLLFAA Sbjct: 611 YTLQFSRRNLLFAA 624 >dbj|BAC79801.1| putative TATA box binding protein-associated factor [Oryza sativa Japonica Group] Length = 563 Score = 40.0 bits (92), Expect(3) = 3e-08 Identities = 17/22 (77%), Positives = 19/22 (86%) Frame = +2 Query: 119 SADCTVKLWDVTASTKAPKMDE 184 SADCTVKLWDV +STK KMD+ Sbjct: 499 SADCTVKLWDVASSTKTLKMDD 520 Score = 38.1 bits (87), Expect(3) = 3e-08 Identities = 17/27 (62%), Positives = 20/27 (74%) Frame = +3 Query: 297 GCTNRLRSLKTLPTKCSPVYTVQVNMR 377 G NRLR LK LPTK +PVYT+Q + R Sbjct: 524 GSANRLRMLKALPTKSTPVYTLQFSRR 550 Score = 25.8 bits (55), Expect(3) = 3e-08 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = +2 Query: 470 FWVQFSRRNLLFAA 511 + +QFSRRNLLFAA Sbjct: 543 YTLQFSRRNLLFAA 556