BLASTX nr result

ID: Coptis21_contig00008026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008026
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001146864.1| LOC100280472 [Zea mays] gi|195604408|gb|ACG2...   189   3e-46
gb|ACL52579.1| unknown [Zea mays] gi|413933429|gb|AFW67980.1| tr...   185   4e-45
ref|XP_003561297.1| PREDICTED: serine/threonine protein phosphat...   184   7e-45
ref|XP_002519463.1| protein phosphatase 2a, regulatory subunit, ...   184   7e-45
ref|XP_002323499.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-44

>ref|NP_001146864.1| LOC100280472 [Zea mays] gi|195604408|gb|ACG24034.1| transposon
           protein [Zea mays] gi|224031429|gb|ACN34790.1| unknown
           [Zea mays] gi|414871926|tpg|DAA50483.1| TPA: Transposon
           protein [Zea mays]
          Length = 522

 Score =  189 bits (479), Expect = 3e-46
 Identities = 87/114 (76%), Positives = 106/114 (92%)
 Frame = -3

Query: 350 SSHFQVAERALFLWNNDHIVTLMAQNRTVIFPIIYEALEKNIQSHWNQAVHGLTSNVRKM 171
           SSHFQVAERALFLWNNDHIV+L+AQNR VIFPII+EALE+NIQSHWNQAVHGLT+NVRKM
Sbjct: 409 SSHFQVAERALFLWNNDHIVSLIAQNRVVIFPIIFEALERNIQSHWNQAVHGLTANVRKM 468

Query: 170 FLEMDNELFEECQRQYLEKETRAKGLEQQRELTWKRLEEVVASKAVIEDMVMVN 9
           FL+MD+ELFEECQ+QY+EK+ +AK +++QRE  W++LE VVA+KA  +DMV+VN
Sbjct: 469 FLDMDSELFEECQQQYMEKQAKAKEIQEQRESAWRQLEAVVAAKAAGDDMVLVN 522


>gb|ACL52579.1| unknown [Zea mays] gi|413933429|gb|AFW67980.1| transposon protein
           [Zea mays]
          Length = 523

 Score =  185 bits (469), Expect = 4e-45
 Identities = 85/114 (74%), Positives = 105/114 (92%)
 Frame = -3

Query: 350 SSHFQVAERALFLWNNDHIVTLMAQNRTVIFPIIYEALEKNIQSHWNQAVHGLTSNVRKM 171
           SSHFQVAERALFLWNNDHIV+L+AQNR VIFPII+EALE+NI SHWNQAVHGLT+NVRKM
Sbjct: 410 SSHFQVAERALFLWNNDHIVSLIAQNRGVIFPIIFEALERNIHSHWNQAVHGLTANVRKM 469

Query: 170 FLEMDNELFEECQRQYLEKETRAKGLEQQRELTWKRLEEVVASKAVIEDMVMVN 9
           FL+MD+ELFEECQ+QY++K+ +AK +++QRE  W++LE VVA+KA  +DMV+VN
Sbjct: 470 FLDMDSELFEECQQQYMDKQAKAKEMQEQRESAWRQLEAVVAAKAAGDDMVLVN 523


>ref|XP_003561297.1| PREDICTED: serine/threonine protein phosphatase 2A 57 kDa
           regulatory subunit B' alpha isoform-like isoform 1
           [Brachypodium distachyon]
           gi|357119129|ref|XP_003561298.1| PREDICTED:
           serine/threonine protein phosphatase 2A 57 kDa
           regulatory subunit B' alpha isoform-like isoform 2
           [Brachypodium distachyon]
          Length = 517

 Score =  184 bits (467), Expect = 7e-45
 Identities = 88/114 (77%), Positives = 105/114 (92%)
 Frame = -3

Query: 350 SSHFQVAERALFLWNNDHIVTLMAQNRTVIFPIIYEALEKNIQSHWNQAVHGLTSNVRKM 171
           SSHFQVAERALFLWNNDHIV+L+AQNR VIFPII+EALE+NIQSHWNQAVHGLT+NVRKM
Sbjct: 405 SSHFQVAERALFLWNNDHIVSLIAQNRGVIFPIIFEALERNIQSHWNQAVHGLTANVRKM 464

Query: 170 FLEMDNELFEECQRQYLEKETRAKGLEQQRELTWKRLEEVVASKAVIEDMVMVN 9
           FL+MD+ELFEECQ+QY+EK+ +AK LE+QRE  W++L E VA+KA  +DMV+VN
Sbjct: 465 FLDMDSELFEECQQQYIEKQAKAKELEEQRESAWRQL-EAVAAKAAGDDMVLVN 517


>ref|XP_002519463.1| protein phosphatase 2a, regulatory subunit, putative [Ricinus
           communis] gi|223541326|gb|EEF42877.1| protein
           phosphatase 2a, regulatory subunit, putative [Ricinus
           communis]
          Length = 494

 Score =  184 bits (467), Expect = 7e-45
 Identities = 90/114 (78%), Positives = 102/114 (89%)
 Frame = -3

Query: 353 TSSHFQVAERALFLWNNDHIVTLMAQNRTVIFPIIYEALEKNIQSHWNQAVHGLTSNVRK 174
           TSSHFQVAERALFLWNN+HIV+L+AQNR+VI PII+EALEKNIQ+HWNQAVHGLT NVRK
Sbjct: 382 TSSHFQVAERALFLWNNEHIVSLIAQNRSVILPIIFEALEKNIQTHWNQAVHGLTVNVRK 441

Query: 173 MFLEMDNELFEECQRQYLEKETRAKGLEQQRELTWKRLEEVVASKAVIEDMVMV 12
           MFLEMD ELFEECQRQY EKE+RAK +E+QRE+TWKRL +V A +   EDMV V
Sbjct: 442 MFLEMDMELFEECQRQYTEKESRAKEMEEQREMTWKRLADVAAQRGG-EDMVTV 494


>ref|XP_002323499.1| predicted protein [Populus trichocarpa] gi|222868129|gb|EEF05260.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  181 bits (459), Expect = 6e-44
 Identities = 85/114 (74%), Positives = 100/114 (87%)
 Frame = -3

Query: 353 TSSHFQVAERALFLWNNDHIVTLMAQNRTVIFPIIYEALEKNIQSHWNQAVHGLTSNVRK 174
           TSSHFQVAERALFLWNN+HIV+L+AQNR+V+ PII+EALEKNI  HWNQAVHGLT NVRK
Sbjct: 380 TSSHFQVAERALFLWNNEHIVSLIAQNRSVVLPIIFEALEKNIHGHWNQAVHGLTVNVRK 439

Query: 173 MFLEMDNELFEECQRQYLEKETRAKGLEQQRELTWKRLEEVVASKAVIEDMVMV 12
           MFLEMD ELFEECQRQ+ EK++RA+ +E+QRELTWKRL +V A +   EDM+ V
Sbjct: 440 MFLEMDTELFEECQRQHAEKKSRARDVEEQRELTWKRLADVAAQRGGGEDMITV 493


Top