BLASTX nr result
ID: Coptis21_contig00008017
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00008017
(1070 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27055.3| unnamed protein product [Vitis vinifera] 453 e-125
ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259... 453 e-125
ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II tra... 437 e-120
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra... 437 e-120
ref|XP_002315956.1| predicted protein [Populus trichocarpa] gi|2... 429 e-118
>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 453 bits (1165), Expect = e-125
Identities = 224/329 (68%), Positives = 275/329 (83%), Gaps = 5/329 (1%)
Frame = -3
Query: 972 MAENQLIVVVEGTAAIGPYWASIVSDYLEKIIRSFCGNELTGQKLPAANAEFSLVVFNAH 793
MAE QL+V VEGTAA+GPYW ++VSDYL+KIIR FCGNEL GQK ++N E SLV+FNAH
Sbjct: 1 MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60
Query: 792 GSYSACLVQRSGWTRNVDIFLQWLSAISFTGGGFSDVAIAEGLSEALMMFPSPPSGTGAQ 613
GSY +CLVQRSGWTR+VD+FLQWLSA+ F GGGF+D AIAEGL+EALMMF +G+ Q
Sbjct: 61 GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120
Query: 612 -NVDGHKHCILIAASNPYPLPTPVYRPKIPKMEQSENNDVSAESCLADAETVAKSFAKCS 436
NVDG +HCIL+AA+NPYPLPTPVY+P++ MEQ+E+ + ES L+DAE VAKSFA+CS
Sbjct: 121 QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180
Query: 435 LSLSVISPKQLPKLRAIYTAGKRNPRVADPVVDNIKNPYFLVLLSENFMEARNALSRSGI 256
+SLSVI PKQLPKL++IY AGKRNPRVADP VDN+KNP+FLVL+S++FMEAR ALSR G+
Sbjct: 181 VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGL 240
Query: 255 TNITSNQSPVKMD-TSIPQVSGPPPT---SVNGLHVNRQSVPLGNLPTATVKVEPSTLTS 88
+N+T+NQSPVKMD S+PQVS PP SVNG+ +NR ++ +G +PTATVKVEPST+TS
Sbjct: 241 SNMTANQSPVKMDIASVPQVSAAPPASIPSVNGI-MNRPTIAVGAVPTATVKVEPSTVTS 299
Query: 87 LASGPAFGHLPSVSHGASQSIPTLHTSSP 1
+ SGP F H+PSV ASQ +P+L TSSP
Sbjct: 300 ITSGPGFPHIPSVPRAASQGVPSLQTSSP 328
>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
Length = 827
Score = 453 bits (1165), Expect = e-125
Identities = 224/329 (68%), Positives = 275/329 (83%), Gaps = 5/329 (1%)
Frame = -3
Query: 972 MAENQLIVVVEGTAAIGPYWASIVSDYLEKIIRSFCGNELTGQKLPAANAEFSLVVFNAH 793
MAE QL+V VEGTAA+GPYW ++VSDYL+KIIR FCGNEL GQK ++N E SLV+FNAH
Sbjct: 1 MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60
Query: 792 GSYSACLVQRSGWTRNVDIFLQWLSAISFTGGGFSDVAIAEGLSEALMMFPSPPSGTGAQ 613
GSY +CLVQRSGWTR+VD+FLQWLSA+ F GGGF+D AIAEGL+EALMMF +G+ Q
Sbjct: 61 GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120
Query: 612 -NVDGHKHCILIAASNPYPLPTPVYRPKIPKMEQSENNDVSAESCLADAETVAKSFAKCS 436
NVDG +HCIL+AA+NPYPLPTPVY+P++ MEQ+E+ + ES L+DAE VAKSFA+CS
Sbjct: 121 QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180
Query: 435 LSLSVISPKQLPKLRAIYTAGKRNPRVADPVVDNIKNPYFLVLLSENFMEARNALSRSGI 256
+SLSVI PKQLPKL++IY AGKRNPRVADP VDN+KNP+FLVL+S++FMEAR ALSR G+
Sbjct: 181 VSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGL 240
Query: 255 TNITSNQSPVKMD-TSIPQVSGPPPT---SVNGLHVNRQSVPLGNLPTATVKVEPSTLTS 88
+N+T+NQSPVKMD S+PQVS PP SVNG+ +NR ++ +G +PTATVKVEPST+TS
Sbjct: 241 SNMTANQSPVKMDIASVPQVSAAPPASIPSVNGI-MNRPTIAVGAVPTATVKVEPSTVTS 299
Query: 87 LASGPAFGHLPSVSHGASQSIPTLHTSSP 1
+ SGP F H+PSV ASQ +P+L TSSP
Sbjct: 300 ITSGPGFPHIPSVPRAASQGVPSLQTSSP 328
>ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like, partial [Cucumis sativus]
Length = 595
Score = 437 bits (1125), Expect = e-120
Identities = 221/330 (66%), Positives = 268/330 (81%), Gaps = 6/330 (1%)
Frame = -3
Query: 972 MAENQLIVVVEGTAAIGPYWASIVSDYLEKIIRSFCGNELTGQKLPAANAEFSLVVFNAH 793
MA+ QLIVVVEGTAA+GP+W ++VSDY+EKI+RSFCGNELTGQK P +N EFSLV F+ H
Sbjct: 1 MADKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTH 60
Query: 792 GSYSACLVQRSGWTRNVDIFLQWLSAISFTGGGFSDVAIAEGLSEALMMFPSPPS-GTGA 616
GSY CLVQR+GWTR+VDIF+QWLSAI F+GGGFSD AIAEGL+EALMMFP+ P+ G
Sbjct: 61 GSYCGCLVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQ 120
Query: 615 QNVDGHKHCILIAASNPYPLPTPVYRPKIPKMEQSENNDVSAESCLADAETVAKSFAKCS 436
Q +D KHCIL+AASNPYPLPTPVYRP + +EQ +N V S + AETVAKSF +C
Sbjct: 121 QTMDMQKHCILVAASNPYPLPTPVYRPAVQNLEQHDN--VEPGSSQSYAETVAKSFPQCF 178
Query: 435 LSLSVISPKQLPKLRAIYTAGKRNPRVADPVVDNIKNPYFLVLLSENFMEARNALSRSGI 256
+SLSVI PKQLPKL+AIYTAGKRNPR ADP +DN+K+P +LVL+SENF+EAR ALSR GI
Sbjct: 179 ISLSVICPKQLPKLKAIYTAGKRNPRAADPPIDNVKSPSYLVLISENFVEARAALSRPGI 238
Query: 255 TNITSNQSPVKMD-TSIPQVSGPPPT---SVNGLHVNRQSVPLGNLPTATVKVEPSTLTS 88
T++ +NQSPVKMD +S+ V+GPPPT SVNG +NRQ V + N PTATVKVEP+T+TS
Sbjct: 239 TSLPANQSPVKMDISSVVPVTGPPPTTTPSVNGPIINRQPVSVPNGPTATVKVEPNTVTS 298
Query: 87 LASGPAF-GHLPSVSHGASQSIPTLHTSSP 1
+ +G + H+PSV ASQ +P+L TSSP
Sbjct: 299 MTNGSGYPPHMPSVVRAASQGVPSLQTSSP 328
>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Cucumis sativus]
Length = 858
Score = 437 bits (1125), Expect = e-120
Identities = 221/330 (66%), Positives = 268/330 (81%), Gaps = 6/330 (1%)
Frame = -3
Query: 972 MAENQLIVVVEGTAAIGPYWASIVSDYLEKIIRSFCGNELTGQKLPAANAEFSLVVFNAH 793
MA+ QLIVVVEGTAA+GP+W ++VSDY+EKI+RSFCGNELTGQK P +N EFSLV F+ H
Sbjct: 1 MADKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTH 60
Query: 792 GSYSACLVQRSGWTRNVDIFLQWLSAISFTGGGFSDVAIAEGLSEALMMFPSPPS-GTGA 616
GSY CLVQR+GWTR+VDIF+QWLSAI F+GGGFSD AIAEGL+EALMMFP+ P+ G
Sbjct: 61 GSYCGCLVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQ 120
Query: 615 QNVDGHKHCILIAASNPYPLPTPVYRPKIPKMEQSENNDVSAESCLADAETVAKSFAKCS 436
Q +D KHCIL+AASNPYPLPTPVYRP + +EQ +N V S + AETVAKSF +C
Sbjct: 121 QTMDMQKHCILVAASNPYPLPTPVYRPAVQNLEQHDN--VEPGSSQSYAETVAKSFPQCF 178
Query: 435 LSLSVISPKQLPKLRAIYTAGKRNPRVADPVVDNIKNPYFLVLLSENFMEARNALSRSGI 256
+SLSVI PKQLPKL+AIYTAGKRNPR ADP +DN+K+P +LVL+SENF+EAR ALSR GI
Sbjct: 179 ISLSVICPKQLPKLKAIYTAGKRNPRAADPPIDNVKSPSYLVLISENFVEARAALSRPGI 238
Query: 255 TNITSNQSPVKMD-TSIPQVSGPPPT---SVNGLHVNRQSVPLGNLPTATVKVEPSTLTS 88
T++ +NQSPVKMD +S+ V+GPPPT SVNG +NRQ V + N PTATVKVEP+T+TS
Sbjct: 239 TSLPANQSPVKMDISSVVPVTGPPPTTTPSVNGPIINRQPVSVPNGPTATVKVEPNTVTS 298
Query: 87 LASGPAF-GHLPSVSHGASQSIPTLHTSSP 1
+ +G + H+PSV ASQ +P+L TSSP
Sbjct: 299 MTNGSGYPPHMPSVVRAASQGVPSLQTSSP 328
>ref|XP_002315956.1| predicted protein [Populus trichocarpa] gi|222864996|gb|EEF02127.1|
predicted protein [Populus trichocarpa]
Length = 796
Score = 429 bits (1104), Expect = e-118
Identities = 221/329 (67%), Positives = 262/329 (79%), Gaps = 5/329 (1%)
Frame = -3
Query: 972 MAENQLIVVVEGTAAIGPYWASIVSDYLEKIIRSFCGNELTGQKLPAANAEFSLVVFNAH 793
MAE QLIV VEGTAA+GP+W+ IVSDYLEKIIR K+P + E S+V FN+H
Sbjct: 1 MAEKQLIVAVEGTAAMGPFWSIIVSDYLEKIIR---------YKVPTSIVELSIVTFNSH 51
Query: 792 GSYSACLVQRSGWTRNVDIFLQWLSAISFTGGGFSDVAIAEGLSEALMMFPSPPSGTGAQ 613
GSYSACLVQRSGWTR+VDIFLQWLSAI F GGGF+D AIAEGLSEALMMFP P+G+ Q
Sbjct: 52 GSYSACLVQRSGWTRDVDIFLQWLSAIPFAGGGFNDAAIAEGLSEALMMFPIDPNGSQTQ 111
Query: 612 -NVDGHKHCILIAASNPYPLPTPVYRPKIPKMEQSENNDVSAESCLADAETVAKSFAKCS 436
N+D ++CILIAASNP+PLPTPVYRP+I +EQ EN D ES L+DAETVAKSF +CS
Sbjct: 112 SNIDEQRNCILIAASNPHPLPTPVYRPQIQNLEQIENIDAQNESRLSDAETVAKSFPQCS 171
Query: 435 LSLSVISPKQLPKLRAIYTAGKRNPRVADPVVDNIKNPYFLVLLSENFMEARNALSRSGI 256
+SLS+I PKQLPKLR+IY AGKRN R ADP VD++KNP+FLVL+SENFMEAR ALS G+
Sbjct: 172 VSLSIICPKQLPKLRSIYNAGKRNSRAADPPVDSVKNPHFLVLISENFMEARAALSLPGV 231
Query: 255 TNITSNQSPVKMD-TSIPQVSGPPPT---SVNGLHVNRQSVPLGNLPTATVKVEPSTLTS 88
T++TSNQ+PVK+D S+ V+GP PT SVNG NR ++ +GN+PTATVKVEPST+TS
Sbjct: 232 TSLTSNQTPVKVDIASVTSVTGPAPTSIPSVNGSITNRPTISVGNVPTATVKVEPSTITS 291
Query: 87 LASGPAFGHLPSVSHGASQSIPTLHTSSP 1
+A+GP F H PSV ASQ +P L TSSP
Sbjct: 292 MANGPTFPHNPSVPRPASQGVPILQTSSP 320