BLASTX nr result

ID: Coptis21_contig00008005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008005
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602285.1| LCR-like protein [Medicago truncatula] gi|35...   197   3e-48
ref|NP_001066778.1| Os12g0484700 [Oryza sativa Japonica Group] g...   196   7e-48
ref|NP_001235124.1| uncharacterized protein LOC100306443 [Glycin...   196   1e-47
gb|ABA98518.1| Yippee-like protein At4g27740, putative [Oryza sa...   195   2e-47
gb|AFK42973.1| unknown [Lotus japonicus]                              194   2e-47

>ref|XP_003602285.1| LCR-like protein [Medicago truncatula] gi|355491333|gb|AES72536.1|
           LCR-like protein [Medicago truncatula]
           gi|388498602|gb|AFK37367.1| unknown [Medicago
           truncatula]
          Length = 106

 Score =  197 bits (502), Expect = 3e-48
 Identities = 87/106 (82%), Positives = 98/106 (92%)
 Frame = -3

Query: 619 MAELVGPRVYCCYNCRNHVSLHDDIVSKSFQGRNGRAFLFSHVMNIVVGTKEDRHLITGL 440
           MAE + PR+YCC NCRNHVSLHDDI+SK+FQGRNGRAFLFSH MN+V G KEDRHL+TGL
Sbjct: 1   MAEFIVPRLYCCCNCRNHVSLHDDIISKAFQGRNGRAFLFSHAMNVVTGPKEDRHLLTGL 60

Query: 439 HTVADVYCCDCRQVLGWKYEKAYEPTQKYKEGKFILEKAKIVIENW 302
           HTVADVYC DCR+VLGWKYE+AYE +QKYKEGKFILEK+KIV+ENW
Sbjct: 61  HTVADVYCGDCREVLGWKYERAYEASQKYKEGKFILEKSKIVMENW 106


>ref|NP_001066778.1| Os12g0484700 [Oryza sativa Japonica Group]
           gi|113649285|dbj|BAF29797.1| Os12g0484700 [Oryza sativa
           Japonica Group]
          Length = 109

 Score =  196 bits (499), Expect = 7e-48
 Identities = 88/108 (81%), Positives = 98/108 (90%)
 Frame = -3

Query: 625 IWMAELVGPRVYCCYNCRNHVSLHDDIVSKSFQGRNGRAFLFSHVMNIVVGTKEDRHLIT 446
           ++MAELVGPRVY C NCRNHV LHDDI+SK+FQGRNGRAFLFSH MN+VVG KEDR L+T
Sbjct: 2   VFMAELVGPRVYSCCNCRNHVCLHDDIISKAFQGRNGRAFLFSHAMNVVVGAKEDRQLMT 61

Query: 445 GLHTVADVYCCDCRQVLGWKYEKAYEPTQKYKEGKFILEKAKIVIENW 302
           GLHTVAD+YC DCR+VLGWKYE+AYE TQKYKEGKFI EK+KIV ENW
Sbjct: 62  GLHTVADIYCNDCREVLGWKYERAYEETQKYKEGKFIFEKSKIVKENW 109


>ref|NP_001235124.1| uncharacterized protein LOC100306443 [Glycine max]
           gi|356509220|ref|XP_003523349.1| PREDICTED: protein
           yippee-like At4g27745-like [Glycine max]
           gi|255628561|gb|ACU14625.1| unknown [Glycine max]
          Length = 106

 Score =  196 bits (497), Expect = 1e-47
 Identities = 88/106 (83%), Positives = 97/106 (91%)
 Frame = -3

Query: 619 MAELVGPRVYCCYNCRNHVSLHDDIVSKSFQGRNGRAFLFSHVMNIVVGTKEDRHLITGL 440
           MAEL+GPR+Y C NCRNHVSLHDDI+SK+F GRNGRAFLFSH MNIV G KEDRHL+TGL
Sbjct: 1   MAELIGPRLYSCSNCRNHVSLHDDIISKAFHGRNGRAFLFSHAMNIVTGPKEDRHLLTGL 60

Query: 439 HTVADVYCCDCRQVLGWKYEKAYEPTQKYKEGKFILEKAKIVIENW 302
           HTVADVYC DCR+VLGWKYE+AYE +QKYKEGKFILEK+KIV ENW
Sbjct: 61  HTVADVYCGDCREVLGWKYERAYEASQKYKEGKFILEKSKIVKENW 106


>gb|ABA98518.1| Yippee-like protein At4g27740, putative [Oryza sativa Japonica
           Group] gi|125536637|gb|EAY83125.1| hypothetical protein
           OsI_38341 [Oryza sativa Indica Group]
           gi|125579350|gb|EAZ20496.1| hypothetical protein
           OsJ_36103 [Oryza sativa Japonica Group]
           gi|215768213|dbj|BAH00442.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 106

 Score =  195 bits (495), Expect = 2e-47
 Identities = 88/106 (83%), Positives = 96/106 (90%)
 Frame = -3

Query: 619 MAELVGPRVYCCYNCRNHVSLHDDIVSKSFQGRNGRAFLFSHVMNIVVGTKEDRHLITGL 440
           MAELVGPRVY C NCRNHV LHDDI+SK+FQGRNGRAFLFSH MN+VVG KEDR L+TGL
Sbjct: 1   MAELVGPRVYSCCNCRNHVCLHDDIISKAFQGRNGRAFLFSHAMNVVVGAKEDRQLMTGL 60

Query: 439 HTVADVYCCDCRQVLGWKYEKAYEPTQKYKEGKFILEKAKIVIENW 302
           HTVAD+YC DCR+VLGWKYE+AYE TQKYKEGKFI EK+KIV ENW
Sbjct: 61  HTVADIYCNDCREVLGWKYERAYEETQKYKEGKFIFEKSKIVKENW 106


>gb|AFK42973.1| unknown [Lotus japonicus]
          Length = 106

 Score =  194 bits (494), Expect = 2e-47
 Identities = 86/106 (81%), Positives = 97/106 (91%)
 Frame = -3

Query: 619 MAELVGPRVYCCYNCRNHVSLHDDIVSKSFQGRNGRAFLFSHVMNIVVGTKEDRHLITGL 440
           M EL+GPR+Y C NCRNHVSLHDDI+SK+FQG+NGRAFLFSH MN+V G KEDRHL+TGL
Sbjct: 1   MGELIGPRLYSCCNCRNHVSLHDDIISKAFQGKNGRAFLFSHAMNVVTGPKEDRHLLTGL 60

Query: 439 HTVADVYCCDCRQVLGWKYEKAYEPTQKYKEGKFILEKAKIVIENW 302
           HTVADVYC DCR+VLGWKYE+AYE +QKYKEGKFILEK+KIV ENW
Sbjct: 61  HTVADVYCGDCREVLGWKYERAYEASQKYKEGKFILEKSKIVKENW 106


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