BLASTX nr result

ID: Coptis21_contig00008002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008002
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]   163   7e-38
emb|CBI31915.3| unnamed protein product [Vitis vinifera]              162   9e-38
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...   162   9e-38
ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...   151   2e-34
ref|XP_004144315.1| PREDICTED: uncharacterized protein LOC101215...   151   3e-34

>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score =  163 bits (412), Expect = 7e-38
 Identities = 97/246 (39%), Positives = 139/246 (56%), Gaps = 18/246 (7%)
 Frame = -3

Query: 998 CKLFTLNSVSLTLLSIATKLPVDLTTSMPSAQDQFSKLCGTTFICVCMGFLMPSFGNNRN 819
           CK F+LN+ SLT++++ATKL VDL TSMP  QDQ SKL  T  +C  MG  MPS G   N
Sbjct: 56  CKFFSLNATSLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVXMCTVMGNFMPSIGTMEN 115

Query: 818 VDIFSNLMSLSIFVISIVVNICIQIHTGVIVLFIIEHIIVLCFMVLLLSMFWQIYPYVKE 639
            ++FSN+++L I VI+++VN+CIQ+ TGVI ++  EH +V+  M++LL +          
Sbjct: 116 KEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLIL-----SFSA 170

Query: 638 VNSFTTSHYNEL---------VRKGSSS----MFGRLK----GCYLYAYCNDPQFTMSIN 510
           +   TT HY EL         V++ S+     +F +L+      ++ A+ + PQF +  +
Sbjct: 171 LTVPTTKHYFELKYRKKYEIAVKESSNETDIPVFKKLREDLMKYWIMAHSSXPQFVIGRS 230

Query: 509 LVSAGVGTTCLLCLVILVQALIRSLILK-RVKFCSGMSDYDWSMPXXXXXXXXXXXVGTF 333
           +     G  CLL   ILV+A IRS ++    KFCSG SDY WS+            VGT 
Sbjct: 231 VTCTASGALCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTI 290

Query: 332 PIVFRW 315
              FRW
Sbjct: 291 GPAFRW 296


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  162 bits (411), Expect = 9e-38
 Identities = 97/246 (39%), Positives = 139/246 (56%), Gaps = 18/246 (7%)
 Frame = -3

Query: 998 CKLFTLNSVSLTLLSIATKLPVDLTTSMPSAQDQFSKLCGTTFICVCMGFLMPSFGNNRN 819
           CK F+LN+ SLT++++ATKL VDL TSMP  QDQ SKL  T  +C  MG  MPS G   N
Sbjct: 56  CKFFSLNATSLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMEN 115

Query: 818 VDIFSNLMSLSIFVISIVVNICIQIHTGVIVLFIIEHIIVLCFMVLLLSMFWQIYPYVKE 639
            ++FSN+++L I VI+++VN+CIQ+ TGVI ++  EH +V+  M++LL +          
Sbjct: 116 KEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLIL-----SFSA 170

Query: 638 VNSFTTSHYNEL---------VRKGSSS----MFGRLK----GCYLYAYCNDPQFTMSIN 510
           +   TT HY EL         V++ S+     +F +L+      ++ A+ + PQF +  +
Sbjct: 171 LTVPTTKHYFELKYRKKYEIAVKESSNETDIPVFKKLREDLMKYWIMAHSSCPQFVIGRS 230

Query: 509 LVSAGVGTTCLLCLVILVQALIRSLILK-RVKFCSGMSDYDWSMPXXXXXXXXXXXVGTF 333
           +     G  CLL   ILV+A IRS ++    KFCSG SDY WS+            VGT 
Sbjct: 231 VTCTASGALCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTI 290

Query: 332 PIVFRW 315
              FRW
Sbjct: 291 GPAFRW 296


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score =  162 bits (411), Expect = 9e-38
 Identities = 97/246 (39%), Positives = 139/246 (56%), Gaps = 18/246 (7%)
 Frame = -3

Query: 998 CKLFTLNSVSLTLLSIATKLPVDLTTSMPSAQDQFSKLCGTTFICVCMGFLMPSFGNNRN 819
           CK F+LN+ SLT++++ATKL VDL TSMP  QDQ SKL  T  +C  MG  MPS G   N
Sbjct: 56  CKFFSLNATSLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMEN 115

Query: 818 VDIFSNLMSLSIFVISIVVNICIQIHTGVIVLFIIEHIIVLCFMVLLLSMFWQIYPYVKE 639
            ++FSN+++L I VI+++VN+CIQ+ TGVI ++  EH +V+  M++LL +          
Sbjct: 116 KEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLIL-----SFSA 170

Query: 638 VNSFTTSHYNEL---------VRKGSSS----MFGRLK----GCYLYAYCNDPQFTMSIN 510
           +   TT HY EL         V++ S+     +F +L+      ++ A+ + PQF +  +
Sbjct: 171 LTVPTTKHYFELKYRKKYEIAVKESSNETDIPVFKKLREDLMKYWIMAHSSCPQFVIGRS 230

Query: 509 LVSAGVGTTCLLCLVILVQALIRSLILK-RVKFCSGMSDYDWSMPXXXXXXXXXXXVGTF 333
           +     G  CLL   ILV+A IRS ++    KFCSG SDY WS+            VGT 
Sbjct: 231 VTCTASGALCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTI 290

Query: 332 PIVFRW 315
              FRW
Sbjct: 291 GPAFRW 296


>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score =  151 bits (382), Expect = 2e-34
 Identities = 90/241 (37%), Positives = 124/241 (51%), Gaps = 13/241 (5%)
 Frame = -3

Query: 998 CKLFTLNSVSLTLLSIATKLPVDLTTSMPSAQDQFSKLCGTTFICVCMGFLMPSFGNNRN 819
           CK F+LN+ SLT +++  KL VDL TSMPS QDQ +KL  T F+C  MG  MPS G   N
Sbjct: 56  CKFFSLNATSLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDN 115

Query: 818 VDIFSNLMSLSIFVISIVVNICIQIHTGVIVLFIIEHIIVLCFMVLLLSMFWQIYPYVKE 639
            D+  NLM+L I VI+ VVNICIQ+ TG I +F  EH +V+  M+L+L +       V  
Sbjct: 116 NDLLMNLMALGILVITDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSATTVPT 175

Query: 638 VNSFTTSHYNE-----------LVRKGSSSMFGRLKGCYLYAYCNDPQFTMSINLVSAGV 492
                 S YN+             R  +  +   L   ++ A+ + PQF M+ ++     
Sbjct: 176 TKRILESKYNKRYDVAMKCPLATERTVAKKIQQDLSKFWMMAHTSSPQFVMARSVTCTAS 235

Query: 491 GTTCLLCLVILVQALIRSLIL--KRVKFCSGMSDYDWSMPXXXXXXXXXXXVGTFPIVFR 318
           G  CLL  + L +A++RS  L  + + FC G SDY WS             +GT     R
Sbjct: 236 GFFCLLSAITLGEAMVRSYFLRPRSLGFCHGDSDYKWSTSLVLVCQTTTVAIGTIAPAIR 295

Query: 317 W 315
           W
Sbjct: 296 W 296


>ref|XP_004144315.1| PREDICTED: uncharacterized protein LOC101215296 [Cucumis sativus]
          Length = 731

 Score =  151 bits (381), Expect = 3e-34
 Identities = 94/259 (36%), Positives = 137/259 (52%), Gaps = 15/259 (5%)
 Frame = -3

Query: 998 CKLFTLNSVSLTLLSIATKLPVDLTTSMPSAQDQFSKLCGTTFICVCMGFLMPSFGNNRN 819
           CK FTLNS SLTL+++A KL VDL TSMP  +DQ +KL     +C  M   MPS G+  N
Sbjct: 56  CKFFTLNSTSLTLIAVAIKLCVDLNTSMPGREDQLAKLSSAVLMCTIMANCMPSLGSMEN 115

Query: 818 VDIFSNLMSLSIFVISIVVNICIQIHTGVIVLFIIEHIIVLCFMVLLLSMFWQIYPYVKE 639
            +IF N+M+L I VI+++VN+ ++I TGVI +++ EH+ +L  M++LL +       V  
Sbjct: 116 QEIFMNVMALGILVITLIVNVGMEIGTGVIYVYMKEHVSILISMLVLLGILSFSASVVPS 175

Query: 638 VNSFTTSHY---NELVR-------KGSSSMFGRLK----GCYLYAYCNDPQFTMSINLVS 501
             S+    Y   +EL         KG   +  RLK      ++ +    PQF M  +   
Sbjct: 176 TKSYLEMKYCVRHELASKECAANGKGDKPVIERLKVDLMKYWMMSQTTSPQFVMGRSATC 235

Query: 500 AGVGTTCLLCLVILVQALIRSLILKR-VKFCSGMSDYDWSMPXXXXXXXXXXXVGTFPIV 324
              G   LL   IL +A++ S ++KR +KFC+G SDY WS+            VGT    
Sbjct: 236 TASGAISLLSAAILAEAILTSYLMKRSLKFCNGQSDYKWSITFILVIQCVAVVVGTVAPA 295

Query: 323 FRWLALFSRMEFFPWRVRN 267
            RW   F+ ++F    +RN
Sbjct: 296 IRW---FTAIKFRCPNLRN 311


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