BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007833
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23047.3| unnamed protein product [Vitis vinifera]              188   5e-46
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   181   4e-44
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   162   3e-38
gb|AEZ00900.1| putative RNA recognition motif-containing protein...   157   9e-37
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...   149   3e-34

>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  188 bits (477), Expect = 5e-46
 Identities = 89/142 (62%), Positives = 112/142 (78%), Gaps = 3/142 (2%)
 Frame = +2

Query: 89  MGDAYWRYNEARQAP-LPPVPLKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDNIG 265
           M D YWRY E RQ P +P +  KR RSDYD+PGGH++PSY+SREDERA++R + ++D+IG
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 266 ASYDRYLRSGQIPTY-GESGRSLGGGMIGHPADDMRMSGVRGFDPMGG-KSQNIGISGGK 439
           ASYDRYLR+ Q+P+Y G+SGR L GG+  HP DD R+ GVRG D     KSQ++G SGG+
Sbjct: 61  ASYDRYLRNAQMPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGR 120

Query: 440 PEIPLPADASNTLFVEGLPGNC 505
           PE+PLP DAS+TLFVEGLP NC
Sbjct: 121 PELPLPPDASSTLFVEGLPANC 142


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  181 bits (460), Expect = 4e-44
 Identities = 88/142 (61%), Positives = 111/142 (78%), Gaps = 3/142 (2%)
 Frame = +2

Query: 89  MGDAYWRYNEARQAP-LPPVPLKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDNIG 265
           M D YWRY E RQ P +P +  KR RSDYD+PGGH++PSY+SREDERA++R + ++D+IG
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 266 ASYDRYLRSGQIPTY-GESGRSLGGGMIGHPADDMRMSGVRGFDPMGG-KSQNIGISGGK 439
           ASYDRYLR+  +P+Y G+SGR L GG+  HP DD R+ GVRG D     KSQ++G SGG+
Sbjct: 61  ASYDRYLRNA-MPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGR 119

Query: 440 PEIPLPADASNTLFVEGLPGNC 505
           PE+PLP DAS+TLFVEGLP NC
Sbjct: 120 PELPLPPDASSTLFVEGLPANC 141


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  162 bits (409), Expect = 3e-38
 Identities = 79/145 (54%), Positives = 103/145 (71%), Gaps = 6/145 (4%)
 Frame = +2

Query: 89  MGDAYWRYNEARQAP---LPPVPLKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDN 259
           M DAYWRY ++RQ P   L  +  KR+RSDYD+P GHE+PSY+SR+DER + R + +TD+
Sbjct: 1   MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60

Query: 260 IGASYDRYLRSGQIPTY--GESGRSLGGGMIGHPADDMRMSGVRGFDPMGG-KSQNIGIS 430
           IGASYDRYLRS Q+ +Y  G+S R + GGM     DD R+ G+   +P    K + +G  
Sbjct: 61  IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120

Query: 431 GGKPEIPLPADASNTLFVEGLPGNC 505
           GG+PE+PLP DAS+TLFVEGLP NC
Sbjct: 121 GGRPEVPLPPDASSTLFVEGLPSNC 145


>gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
           guineensis]
          Length = 294

 Score =  157 bits (397), Expect = 9e-37
 Identities = 82/159 (51%), Positives = 103/159 (64%), Gaps = 19/159 (11%)
 Frame = +2

Query: 86  KMGDAYWRYNEARQAPL----PPVPLKRARSDY-DMPGGHEMPSYYSREDERASYRLVGE 250
           +M DAYWRY++ R        P  PLKR R+DY D+PGG E+  YYSR++ER  +R + +
Sbjct: 34  RMADAYWRYSDPRHQAAAMAAPTAPLKRPRADYADIPGGPEVLGYYSRDEERTGHRTIRD 93

Query: 251 TDNIGASYDRYLRSGQIPTYGESGRSLGGGMIGHPADDMRMSGVRGFD------------ 394
           T++I ASYDRYLR+G     GES R++ GGM GHP DD RM GV G D            
Sbjct: 94  TESIAASYDRYLRNGVSFGAGESVRTVAGGMTGHPVDDRRMMGVGGMDGRTVGYGGGRPE 153

Query: 395 -PMGG-KSQNIGISGGKPEIPLPADASNTLFVEGLPGNC 505
            P+GG   +++G  GG+PE PLP DASNTLFVEGLP NC
Sbjct: 154 PPLGGMDGRSVGYGGGRPEPPLPQDASNTLFVEGLPANC 192


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223545062|gb|EEF46575.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 232

 Score =  149 bits (375), Expect = 3e-34
 Identities = 74/145 (51%), Positives = 101/145 (69%), Gaps = 6/145 (4%)
 Frame = +2

Query: 89  MGDAYWRYNEARQAPLPPVPL---KRARSDYDMPGGHEMPSYYSREDERASYRLVGETDN 259
           M DAYWRY++ARQ    P+P    KR+RSDYD+  GHE+P+YY+R+D+R + R + +TD+
Sbjct: 1   MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60

Query: 260 IGASYDRYLRSGQIPTY--GESGRSLGGGMIGHPADDMRMSGVRGFDP-MGGKSQNIGIS 430
           IGASYDRYLRS  I +Y  G+S R +  G+    ADD R+ G+ G DP    K + +G+ 
Sbjct: 61  IGASYDRYLRSAPISSYSGGQSARPI-SGVPNRVADDPRIMGIGGLDPGPTVKDRTLGLG 119

Query: 431 GGKPEIPLPADASNTLFVEGLPGNC 505
            G+PE  LP DA++TLFVEGLP +C
Sbjct: 120 SGRPETSLPPDATSTLFVEGLPSDC 144