BLASTX nr result

ID: Coptis21_contig00007828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007828
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   127   7e-28
ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   127   7e-28
gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp....   127   7e-28
emb|CBI36765.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis...   125   3e-27

>ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 648

 Score =  127 bits (320), Expect = 7e-28
 Identities = 66/106 (62%), Positives = 80/106 (75%)
 Frame = -2

Query: 318 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 139
           +VRIV+AGD GTGKSSLI TAA + FP   V +PPVL PTRL  DFYPD RVP  +IDT 
Sbjct: 16  EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71

Query: 138 SNSENQVSLHNELKSADAIVLTYACDQPLSFESLSSFWLPLIRQLQ 1
           S +E+   +  ELK ADA+VLTYACDQP + + LS+FWLP +RQL+
Sbjct: 72  SRTEDSAKVAEELKRADAVVLTYACDQPNTLDRLSTFWLPKLRQLE 117


>ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 647

 Score =  127 bits (320), Expect = 7e-28
 Identities = 66/106 (62%), Positives = 80/106 (75%)
 Frame = -2

Query: 318 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 139
           +VRIV+AGD GTGKSSLI TAA + FP   V +PPVL PTRL  DFYPD RVP  +IDT 
Sbjct: 16  EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71

Query: 138 SNSENQVSLHNELKSADAIVLTYACDQPLSFESLSSFWLPLIRQLQ 1
           S +E+   +  ELK ADA+VLTYACDQP + + LS+FWLP +RQL+
Sbjct: 72  SRTEDSAKVAEELKRADAVVLTYACDQPNTLDRLSTFWLPKLRQLE 117


>gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo]
          Length = 647

 Score =  127 bits (320), Expect = 7e-28
 Identities = 66/106 (62%), Positives = 80/106 (75%)
 Frame = -2

Query: 318 KVRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTP 139
           +VRIV+AGD GTGKSSLI TAA + FP   V +PPVL PTRL  DFYPD RVP  +IDT 
Sbjct: 16  EVRIVIAGDRGTGKSSLIVTAAADNFP---VNVPPVLPPTRLPEDFYPD-RVPTTIIDTS 71

Query: 138 SNSENQVSLHNELKSADAIVLTYACDQPLSFESLSSFWLPLIRQLQ 1
           S +E+   +  ELK ADA+VLTYACDQP + + LS+FWLP +RQL+
Sbjct: 72  SRTEDSAKVAEELKRADAVVLTYACDQPNTLDRLSTFWLPKLRQLE 117


>emb|CBI36765.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  125 bits (315), Expect = 3e-27
 Identities = 66/105 (62%), Positives = 80/105 (76%)
 Frame = -2

Query: 315 VRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTPS 136
           VRIVVAGD GTGKSSLI TAA E FP     + PVL PTRL  DFYPD RVP  +IDT S
Sbjct: 54  VRIVVAGDRGTGKSSLIVTAAAENFPAN---VAPVLPPTRLPDDFYPD-RVPITIIDTSS 109

Query: 135 NSENQVSLHNELKSADAIVLTYACDQPLSFESLSSFWLPLIRQLQ 1
           + EN+ +L +EL+ ADA+VLTYACDQP + + LS+FWLP +R+L+
Sbjct: 110 SLENRSALADELRRADAVVLTYACDQPATLDRLSTFWLPELRRLE 154


>ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera]
          Length = 647

 Score =  125 bits (315), Expect = 3e-27
 Identities = 66/105 (62%), Positives = 80/105 (76%)
 Frame = -2

Query: 315 VRIVVAGDSGTGKSSLITTAANEKFPQQQVVIPPVLSPTRLFADFYPDQRVPFIVIDTPS 136
           VRIVVAGD GTGKSSLI TAA E FP     + PVL PTRL  DFYPD RVP  +IDT S
Sbjct: 17  VRIVVAGDRGTGKSSLIVTAAAENFPAN---VAPVLPPTRLPDDFYPD-RVPITIIDTSS 72

Query: 135 NSENQVSLHNELKSADAIVLTYACDQPLSFESLSSFWLPLIRQLQ 1
           + EN+ +L +EL+ ADA+VLTYACDQP + + LS+FWLP +R+L+
Sbjct: 73  SLENRSALADELRRADAVVLTYACDQPATLDRLSTFWLPELRRLE 117


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