BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007785
         (2991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi...  1180   0.0  
ref|XP_002515260.1| pentatricopeptide repeat-containing protein,...  1147   0.0  
ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containi...  1117   0.0  
ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containi...  1115   0.0  
ref|XP_002881173.1| pentatricopeptide repeat-containing protein ...  1030   0.0  

>ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic [Vitis vinifera]
          Length = 867

 Score = 1180 bits (3053), Expect = 0.0
 Identities = 615/899 (68%), Positives = 716/899 (79%), Gaps = 13/899 (1%)
 Frame = +3

Query: 99   MASSTPPHCSLTTTAKPNQNHHTPYLHHQNHFTTSHPHPPHKFTLNXXXXXXXXXXXTNR 278
            MAS TPPHCS+T  AKP QN H P    +NH    H    HK +L            + R
Sbjct: 1    MASPTPPHCSITA-AKPYQNLHYPQNPTKNHHNNHH-WSSHKVSLTNPLP-------SPR 51

Query: 279  NIVKPNVS-------QNPNFQSLSHLPTSKSQLGVDFRGRKSTRFSSKTHFRGPKTSSGS 437
            N  KP  +       +N NF SLS LP SKS+L  DF GR+STRF SK HF  PKT++ +
Sbjct: 52   NAAKPGAASPATATNRNSNFPSLSPLPPSKSELTADFSGRRSTRFVSKMHFGRPKTAAAA 111

Query: 438  ---PAAEEALQQALRFSRDDDGSLDSVLRSYESKFCGSDDYGFLLREFGNRGECSKAVRC 608
                 AEEAL+ A+RF+ DD G +DSVL ++ES+ CGSDDY FLLRE GNRGE +KA+RC
Sbjct: 112  RHTSTAEEALRHAIRFASDDKG-IDSVLLNFESRLCGSDDYTFLLRELGNRGEWAKAIRC 170

Query: 609  FEFAIQREQKRNEQGKLASSMISVLGRLGRVDLAKRVFETANRDGYGNTVYAFSALISAY 788
            FEFA++REQ+RNEQGKLAS+MIS+LGRLG+V+LAK VFETA  +GYGNTVYAFSALISAY
Sbjct: 171  FEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAY 230

Query: 789  GRSGCCEKALMVFDSMKKSGLKPNLVXXXXXXXXXXXXXXXXXXXLKPNLVTYNAVIDAF 968
            GRSG C++A+ VF++MK SGLKPNL                         VTYNAVIDA 
Sbjct: 231  GRSGYCDEAIKVFETMKSSGLKPNL-------------------------VTYNAVIDAC 265

Query: 969  AKGGVDFSKAVEIFDEMVANGVQPDRITFNSLLAVCSRGGLWEQAKNLFGEMVNRGIDQD 1148
             KGGVDF++A EIFDEM+ NGVQPDRITFNSLLAVC RGGLWE A+NLF EM+ RGI+QD
Sbjct: 266  GKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQD 325

Query: 1149 IFTYNTLLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDGCAKAGKLEEALNLFD 1328
            IFTYNTLLDAVCKGGQMDLAF+IMSEM  K+++PNVVTYST+IDG AKAG+L+EALNLF+
Sbjct: 326  IFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFN 385

Query: 1329 EMKHLGIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKDVVTYNALLRNYGKQG 1508
            EMK   I LDRVSYNTLL+IYA LGRF+EA+ +CK ME + IKKD VTYNALL  YGKQG
Sbjct: 386  EMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQG 445

Query: 1509 IYDEVKKLFRGMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFRELKQAGLEADVVLYS 1688
             Y+EVK++F  MK E + PNLLTYSTLIDVYSKGGLYQEAME+FRE K+AGL+ADVVLYS
Sbjct: 446  KYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYS 505

Query: 1689 ALIDALCKNGLVESAVSLLDEMTREGKPPNVVTYNSIIDAFGRSAITKVQEGAASETDEL 1868
            ALIDALCKNGLVESAVS LDEMT+EG  PNVVTYNSIIDAFGRS   +       ET+  
Sbjct: 506  ALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPPYETNVS 565

Query: 1869 MNESSVCMVLQNANEGK--ESNDDRVMQLFEQLAAEKAHPSKEEAKGESQELLCILGLFH 2042
               SS   V+++A E +  +  D++++++F QLAAEK   +K+E +G  QE+LCIL +FH
Sbjct: 566  KMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGR-QEILCILAVFH 624

Query: 2043 KMHELNIKPNVVTFSAILNACSRCNSFEDASVLLEELRLFDNQVYGVAHGLLMGSRENVW 2222
            KMHEL+IKPNVVTFSAILNACSRCNSFEDAS+LLEELRLFDNQVYGVAHGLLMG  +NVW
Sbjct: 625  KMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYGDNVW 684

Query: 2223 IQAQTLFDEVKRMDASTASAFYNALTDVLWHFGQRQGAQLVVLEGNRRHVWENAWCVSCL 2402
            +QAQ+LFDEVK+MD+STASAFYNALTD+LWHFGQR+GAQLVVLEG RRHVWEN W  SCL
Sbjct: 685  VQAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRRHVWENMWSNSCL 744

Query: 2403 DLHLMSSGAAQAMVHAWLLNIRSIVFEGHELPE-LSILTGWGKHSKVAGDGTLRRVVQAL 2579
            DLHLMSSGAA+AMVHAWLLNIRSIVFEGHELP+ LSILTGWGKHSKV GDG LRR ++AL
Sbjct: 745  DLHLMSSGAARAMVHAWLLNIRSIVFEGHELPQLLSILTGWGKHSKVVGDGALRRAIEAL 804

Query: 2580 LIRIGAPFHVAKSNIGRFISTGSVVAAWLRESGTLKVLILHDDRTHPETLRLNQHTDMQ 2756
            L  +GAPF VAK N+GRFISTG+VVAAWLRESGTLKVL+LHDDRT+P+  R +Q +++Q
Sbjct: 805  LTGMGAPFRVAKCNLGRFISTGAVVAAWLRESGTLKVLVLHDDRTNPDRARCSQISNLQ 863


>ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545740|gb|EEF47244.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 878

 Score = 1147 bits (2968), Expect = 0.0
 Identities = 598/888 (67%), Positives = 696/888 (78%), Gaps = 15/888 (1%)
 Frame = +3

Query: 105  SSTPPHCSLTTTAKPNQNHHTPYLHHQNHFTTSHPHPPHKFTLNXXXXXXXXXXXTNRNI 284
            +STPPHCS+T T KP QNH  P  H +NH  T H    H++T             +  N 
Sbjct: 2    ASTPPHCSITAT-KPYQNHQYPQNHLKNHRQTHH----HRWTNQKVSLTKPPLAPSPCNA 56

Query: 285  VKPNVSQ----------NPNFQSLSHLPTSKSQLGVDFRGRKSTRFSSKTHFRGPKTSSG 434
             K   +           NP F SLS L + KS L  DF GR+STRF SK HF  PKT+  
Sbjct: 57   PKAAAAAAAATTTHHTPNPTFHSLSPLQSQKSDLSADFSGRRSTRFVSKLHFGRPKTNMN 116

Query: 435  --SPAAEEALQQALRFSRDDDGSLDSVLRSYESKFCGSDDYGFLLREFGNRGECSKAVRC 608
              +  A EALQQ +++ +DD  +L++VL ++ES+ CG DDY FLLRE GNRG+ +KAVRC
Sbjct: 117  RHTSVALEALQQVIQYGKDDK-ALENVLLNFESRLCGPDDYTFLLRELGNRGDSAKAVRC 175

Query: 609  FEFAIQREQKRNEQGKLASSMISVLGRLGRVDLAKRVFETANRDGYGNTVYAFSALISAY 788
            FEFA++RE  +NEQGKLAS+MIS LGRLG+V+LAK VF+TA ++GYG TVYAFSALISAY
Sbjct: 176  FEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAY 235

Query: 789  GRSGCCEKALMVFDSMKKSGLKPNLVXXXXXXXXXXXXXXXXXXXLKPNLVTYNAVIDAF 968
            GRSG C +A+ VFDSMK +GL PNLV                         TYNAVIDA 
Sbjct: 236  GRSGYCNEAIKVFDSMKSNGLMPNLV-------------------------TYNAVIDAC 270

Query: 969  AKGGVDFSKAVEIFDEMVANGVQPDRITFNSLLAVCSRGGLWEQAKNLFGEMVNRGIDQD 1148
             KGGV+F K VEIFD M++NGVQPDRITFNSLLAVCSRGGLWE A+ LF  MV++GIDQD
Sbjct: 271  GKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQD 330

Query: 1149 IFTYNTLLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDGCAKAGKLEEALNLFD 1328
            IFTYNTLLDAVCKGGQMDLAFEIMSEM  KN+LPNVVTYSTMIDG AK G+L++ALN+F+
Sbjct: 331  IFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFN 390

Query: 1329 EMKHLGIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKDVVTYNALLRNYGKQG 1508
            EMK LG+ LDRVSYNTLL++YA LGRF++A+ +CK ME A I+KDVVTYNALL  YGKQ 
Sbjct: 391  EMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQY 450

Query: 1509 IYDEVKKLFRGMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFRELKQAGLEADVVLYS 1688
             YDEV+++F  MK   ++PNLLTYSTLIDVYSKGGLY+EAME+FRE KQAGL+ADVVLYS
Sbjct: 451  RYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYS 510

Query: 1689 ALIDALCKNGLVESAVSLLDEMTREGKPPNVVTYNSIIDAFGRSAITKVQEGAASETDEL 1868
            ALIDALCKNGLVES+V+LLDEMT+EG  PNVVTYNSIIDAFGRSA  +     + ET  L
Sbjct: 511  ALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTAL 570

Query: 1869 MNESSVCMVLQNANEGK--ESNDDRVMQLFEQLAAEKAHPSKEEAKGESQELLCILGLFH 2042
              ES   +V+Q A E +  +  D+R++++F +LAAEKA  +K   K   QE+LCILG+F 
Sbjct: 571  QVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGK---QEILCILGVFQ 627

Query: 2043 KMHELNIKPNVVTFSAILNACSRCNSFEDASVLLEELRLFDNQVYGVAHGLLMGSRENVW 2222
            KMHEL IKPNVVTFSAILNACSRC+SFEDAS+LLEELRLFDNQVYGVAHGLLMG RENVW
Sbjct: 628  KMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEELRLFDNQVYGVAHGLLMGYRENVW 687

Query: 2223 IQAQTLFDEVKRMDASTASAFYNALTDVLWHFGQRQGAQLVVLEGNRRHVWENAWCVSCL 2402
            +QAQ+LFDEVK MD+STASAFYNALTD+LWHFGQ++GAQLVVLEG RR VWEN W  SCL
Sbjct: 688  LQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENIWSDSCL 747

Query: 2403 DLHLMSSGAAQAMVHAWLLNIRSIVFEGHELPE-LSILTGWGKHSKVAGDGTLRRVVQAL 2579
            DLHLMSSGAA+AMVHAWLLNIRSIVFEGHELP+ LSILTGWGKHSKV GD  LRR V+AL
Sbjct: 748  DLHLMSSGAARAMVHAWLLNIRSIVFEGHELPKLLSILTGWGKHSKVVGDSALRRAVEAL 807

Query: 2580 LIRIGAPFHVAKSNIGRFISTGSVVAAWLRESGTLKVLILHDDRTHPE 2723
            LI +GAPF +AK N+GRFISTGSVVAAWL+ESGTL+VL+LHDDRTHPE
Sbjct: 808  LIGMGAPFRLAKCNLGRFISTGSVVAAWLKESGTLEVLVLHDDRTHPE 855


>ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Cucumis sativus]
          Length = 868

 Score = 1117 bits (2890), Expect = 0.0
 Identities = 580/893 (64%), Positives = 694/893 (77%), Gaps = 9/893 (1%)
 Frame = +3

Query: 105  SSTPPHCSLTTTAKPNQNHHTPYLHHQNHFTTSHPHPP----HKFTLNXXXXXXXXXXXT 272
            +STPPHCS+T  AKP Q H  P  + +NH   +  + P    HKF L            T
Sbjct: 2    ASTPPHCSITA-AKPYQTHQYPQNNLKNHRQNARQNGPWTTTHKFPLVKPLPSTPGHSAT 60

Query: 273  NRNIVKPNVSQNPNFQSLSHLPTSKSQLGVDFRGRKSTRFSSKTHFRGPK---TSSGSPA 443
                    +SQ+PNF SL  LPTSKS+L  +F GR+STRF SK HF  PK   T+  S  
Sbjct: 61   KSTSTP--LSQSPNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTRHSAI 118

Query: 444  AEEALQQALRFSRDDDGSLDSVLRSYESKFCGSDDYGFLLREFGNRGECSKAVRCFEFAI 623
            AEE L Q L+F +DD  SLD++L ++ESK CGS+DY FLLRE GNRGEC KA+RCF+FA+
Sbjct: 119  AEEVLHQVLQFGKDD-ASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL 177

Query: 624  QREQKRNEQGKLASSMISVLGRLGRVDLAKRVFETANRDGYGNTVYAFSALISAYGRSGC 803
             RE ++NE+GKLAS+MIS LGRLG+V+LAK VFETA  +GYGNTV+AFSALISAYG+SG 
Sbjct: 178  VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 237

Query: 804  CEKALMVFDSMKKSGLKPNLVXXXXXXXXXXXXXXXXXXXLKPNLVTYNAVIDAFAKGGV 983
             ++A+ VF+SMK SGLKPNL                         VTYNAVIDA  KGGV
Sbjct: 238  FDEAIKVFESMKVSGLKPNL-------------------------VTYNAVIDACGKGGV 272

Query: 984  DFSKAVEIFDEMVANGVQPDRITFNSLLAVCSRGGLWEQAKNLFGEMVNRGIDQDIFTYN 1163
            +F + VEIF+EM+ NGVQPDRIT+NSLLAVCSRGGLWE A+NLF EM++RGIDQD+FTYN
Sbjct: 273  EFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYN 332

Query: 1164 TLLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDGCAKAGKLEEALNLFDEMKHL 1343
            TLLDAVCKGGQMDLA+EIM EM  K +LPNVVTYSTM DG AKAG+LE+ALNL++EMK L
Sbjct: 333  TLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFL 392

Query: 1344 GIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKDVVTYNALLRNYGKQGIYDEV 1523
            GI LDRVSYNTLL+IYA LGRF++A+ +CK M  + +KKDVVTYNALL  YGKQG ++EV
Sbjct: 393  GIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEV 452

Query: 1524 KKLFRGMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFRELKQAGLEADVVLYSALIDA 1703
             ++F+ MK++ + PNLLTYSTLIDVYSKG LY+EAME+FRE KQAGL+ADVVLYS LI+A
Sbjct: 453  TRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINA 512

Query: 1704 LCKNGLVESAVSLLDEMTREGKPPNVVTYNSIIDAFGRSAITKVQEGAASETDELMNESS 1883
            LCKNGLV+SAV LLDEMT+EG  PNVVTYNSIIDAFGRS   +        ++E  +ES 
Sbjct: 513  LCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESP 572

Query: 1884 VCMVLQNANEGKESNDD-RVMQLFEQLAAEKAHPSKEEAKGESQELLCILGLFHKMHELN 2060
              M+++  +E + + DD  V + ++QL +EK  P+K+E  G+ +E+  IL +F KMHEL 
Sbjct: 573  TFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGK-EEIRSILSVFKKMHELE 631

Query: 2061 IKPNVVTFSAILNACSRCNSFEDASVLLEELRLFDNQVYGVAHGLLMGSRENVWIQAQTL 2240
            IKPNVVTFSAILNACSRC S EDAS+LLEELRLFDNQVYGVAHGLLMG  ENVWIQAQ L
Sbjct: 632  IKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYL 691

Query: 2241 FDEVKRMDASTASAFYNALTDVLWHFGQRQGAQLVVLEGNRRHVWENAWCVSCLDLHLMS 2420
            FDEVK+MD+STASAFYNALTD+LWHFGQ++GAQLVVLEG RR VWE  W  SCLDLHLMS
Sbjct: 692  FDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMS 751

Query: 2421 SGAAQAMVHAWLLNIRSIVFEGHELPE-LSILTGWGKHSKVAGDGTLRRVVQALLIRIGA 2597
            SGAA+AMVHAWLL I S+VFEGH+LP+ LSILTGWGKHSKV GDG LRR ++ALL  +GA
Sbjct: 752  SGAARAMVHAWLLGIHSVVFEGHQLPKLLSILTGWGKHSKVVGDGALRRAIEALLTSMGA 811

Query: 2598 PFHVAKSNIGRFISTGSVVAAWLRESGTLKVLILHDDRTHPETLRLNQHTDMQ 2756
            PF VAK NIGR++STGSVVAAWL+ESGTLK+L+LHDDRTHP+T  ++  + +Q
Sbjct: 812  PFRVAKCNIGRYVSTGSVVAAWLKESGTLKLLVLHDDRTHPDTENMDLISKLQ 864


>ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
            chloroplastic-like [Cucumis sativus]
          Length = 868

 Score = 1115 bits (2884), Expect = 0.0
 Identities = 579/893 (64%), Positives = 694/893 (77%), Gaps = 9/893 (1%)
 Frame = +3

Query: 105  SSTPPHCSLTTTAKPNQNHHTPYLHHQNHFTTSHPHPP----HKFTLNXXXXXXXXXXXT 272
            +STPPHCS+T  AKP Q H  P  + +NH   +  + P    HKF L            T
Sbjct: 2    ASTPPHCSITA-AKPYQTHQYPQNNLKNHRQNARQNGPWTTTHKFPLVKPLPSTPGHSAT 60

Query: 273  NRNIVKPNVSQNPNFQSLSHLPTSKSQLGVDFRGRKSTRFSSKTHFRGPK---TSSGSPA 443
                    +SQ+PNF SL  LPTSKS+L  +F GR+STRF SK HF  PK   T+  S  
Sbjct: 61   KSTSTP--LSQSPNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTRHSAI 118

Query: 444  AEEALQQALRFSRDDDGSLDSVLRSYESKFCGSDDYGFLLREFGNRGECSKAVRCFEFAI 623
            AEE L Q L+F +DD  SLD++L ++ESK CGS+DY FLLRE GNRGEC KA+RCF+FA+
Sbjct: 119  AEEVLHQVLQFGKDD-ASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL 177

Query: 624  QREQKRNEQGKLASSMISVLGRLGRVDLAKRVFETANRDGYGNTVYAFSALISAYGRSGC 803
             RE ++NE+GKLAS+MIS LGRLG+V+LAK VFETA  +GYGNTV+AFSALISAYG+SG 
Sbjct: 178  VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 237

Query: 804  CEKALMVFDSMKKSGLKPNLVXXXXXXXXXXXXXXXXXXXLKPNLVTYNAVIDAFAKGGV 983
             ++A+ VF+SMK SGLKPNL                         VTYNAVIDA  KGGV
Sbjct: 238  FDEAIKVFESMKVSGLKPNL-------------------------VTYNAVIDACGKGGV 272

Query: 984  DFSKAVEIFDEMVANGVQPDRITFNSLLAVCSRGGLWEQAKNLFGEMVNRGIDQDIFTYN 1163
            +F + VEIF+EM+ NGVQPDRIT+NSLLAVCSRGGLWE A+NLF EM++RGIDQD+FTYN
Sbjct: 273  EFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYN 332

Query: 1164 TLLDAVCKGGQMDLAFEIMSEMTVKNVLPNVVTYSTMIDGCAKAGKLEEALNLFDEMKHL 1343
            TLLDAVCKGGQMDLA+EIM EM  K +LPNVVTYSTM DG AKAG+LE+ALNL++EMK L
Sbjct: 333  TLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFL 392

Query: 1344 GIRLDRVSYNTLLAIYASLGRFQEAMGICKMMERANIKKDVVTYNALLRNYGKQGIYDEV 1523
            GI LDRVSYNTLL+IYA LGRF++A+ +CK M  + +KKDVVTYNALL  YGKQG ++EV
Sbjct: 393  GIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEV 452

Query: 1524 KKLFRGMKEENLTPNLLTYSTLIDVYSKGGLYQEAMEIFRELKQAGLEADVVLYSALIDA 1703
             ++F+ MK++ + PNLLTYSTLIDVYSKG LY+EAME+FRE KQAGL+ADVVLYS LI+A
Sbjct: 453  TRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINA 512

Query: 1704 LCKNGLVESAVSLLDEMTREGKPPNVVTYNSIIDAFGRSAITKVQEGAASETDELMNESS 1883
            LCKNGLV+SAV LLDEMT+EG  PNVVTYNSIIDAFGRS   +        ++E  +ES 
Sbjct: 513  LCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESP 572

Query: 1884 VCMVLQNANEGKESNDD-RVMQLFEQLAAEKAHPSKEEAKGESQELLCILGLFHKMHELN 2060
              M+++  +E + + DD  V + ++QL +EK  P+K+E  G+ +E+  IL +F KMHEL 
Sbjct: 573  SFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGK-EEIRSILSVFKKMHELE 631

Query: 2061 IKPNVVTFSAILNACSRCNSFEDASVLLEELRLFDNQVYGVAHGLLMGSRENVWIQAQTL 2240
            IKPNVVTFSAILNACSRC S EDAS+LLEELRLFDNQVYGVAHGLLMG  ENVWIQAQ L
Sbjct: 632  IKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYL 691

Query: 2241 FDEVKRMDASTASAFYNALTDVLWHFGQRQGAQLVVLEGNRRHVWENAWCVSCLDLHLMS 2420
            FDEVK+MD+STASAFYNALTD+LWHFGQ++GAQLVVLEG RR VWE  W  SCLDLHLMS
Sbjct: 692  FDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMS 751

Query: 2421 SGAAQAMVHAWLLNIRSIVFEGHELPE-LSILTGWGKHSKVAGDGTLRRVVQALLIRIGA 2597
            SGAA+AMVHAWLL I S+VFEGH+LP+ LSILTGWGKHSKV GDG LRR ++ALL  +GA
Sbjct: 752  SGAARAMVHAWLLGIHSVVFEGHQLPKLLSILTGWGKHSKVVGDGALRRAIEALLTSMGA 811

Query: 2598 PFHVAKSNIGRFISTGSVVAAWLRESGTLKVLILHDDRTHPETLRLNQHTDMQ 2756
            PF VAK NIGR++STGSVVAAWL+ESGTLK+L+LHDDRTHP++  ++  + +Q
Sbjct: 812  PFRVAKCNIGRYVSTGSVVAAWLKESGTLKLLVLHDDRTHPDSENMDLISKLQ 864


>ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297327012|gb|EFH57432.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 917

 Score = 1030 bits (2662), Expect = 0.0
 Identities = 546/883 (61%), Positives = 645/883 (73%), Gaps = 8/883 (0%)
 Frame = +3

Query: 132  TTTAKPNQNHHTPYLHHQNHFTTSHPH----PPHKFTLNXXXXXXXXXXXTNRNIVKPNV 299
            TTT    Q    P  +H+ +  +S P     PP                     +    +
Sbjct: 73   TTTNNHRQTRQNPNYNHRPYGVSSSPRGSAPPPSSVA----------------TVAPAQL 116

Query: 300  SQNPNFQSLSHLPTSKSQLGVDFRGRKSTRFSSKTHFRGPKTSSG---SPAAEEALQQAL 470
            SQ PNF   S L T KS L  DF GR+STRF SK HF  PKT+     S AAE+ALQ A+
Sbjct: 117  SQTPNF---SPLQTPKSDLSSDFSGRRSTRFVSKMHFGRPKTTMATRHSSAAEDALQNAI 173

Query: 471  RFSRDDDGSLDSVLRSYESKFCGSDDYGFLLREFGNRGECSKAVRCFEFAIQREQKRNEQ 650
             FS DD+    S++ S+ESK CGSDD  +++RE GNRGEC KAV  +EFA++RE+++NEQ
Sbjct: 174  DFSGDDE-MFHSLMLSFESKLCGSDDCTYIIRELGNRGECDKAVGFYEFAVKRERRKNEQ 232

Query: 651  GKLASSMISVLGRLGRVDLAKRVFETANRDGYGNTVYAFSALISAYGRSGCCEKALMVFD 830
            GKLAS+MIS LGR G+V +AKR+FETA   GYGNTVYAFSALISAYGRSG  E+A+ VF+
Sbjct: 233  GKLASAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFN 292

Query: 831  SMKKSGLKPNLVXXXXXXXXXXXXXXXXXXXLKPNLVTYNAVIDAFAKGGVDFSKAVEIF 1010
            SMK+ GL+PNLV                         TYNAVIDA  KGG++F +  + F
Sbjct: 293  SMKEYGLRPNLV-------------------------TYNAVIDACGKGGMEFKQVAKFF 327

Query: 1011 DEMVANGVQPDRITFNSLLAVCSRGGLWEQAKNLFGEMVNRGIDQDIFTYNTLLDAVCKG 1190
            DEM  N VQPDRITFNSLLAVCSRGGLWE A+NLF EM NR I+QD+F+YNTLLDA+CKG
Sbjct: 328  DEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKG 387

Query: 1191 GQMDLAFEIMSEMTVKNVLPNVVTYSTMIDGCAKAGKLEEALNLFDEMKHLGIRLDRVSY 1370
            GQMDLAFEI+++M  K ++PNVV+YST+IDG AKAG+ +EALNLF EM++L I LDRVSY
Sbjct: 388  GQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSY 447

Query: 1371 NTLLAIYASLGRFQEAMGICKMMERANIKKDVVTYNALLRNYGKQGIYDEVKKLFRGMKE 1550
            NTLL+IY  +GR +EA+ I + M    IKKDVVTYNALL  YGKQG YDEVKK+F  MK 
Sbjct: 448  NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKR 507

Query: 1551 ENLTPNLLTYSTLIDVYSKGGLYQEAMEIFRELKQAGLEADVVLYSALIDALCKNGLVES 1730
            E++ PNLLTYSTLID YSKGGLY+EAME+FRE K AGL ADVVLYSALIDALCKNGLV S
Sbjct: 508  EHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGS 567

Query: 1731 AVSLLDEMTREGKPPNVVTYNSIIDAFGRSAITKVQEGAASETDELMNESSVCMVLQNAN 1910
            AVSL+DEMT+EG  PNVVTYNSIIDAFGRSA           + +  N  S+       +
Sbjct: 568  AVSLIDEMTKEGISPNVVTYNSIIDAFGRSA-------TMERSADYSNGGSLPFSSSALS 620

Query: 1911 EGKESNDDRVMQLFEQLAAEKAHPSKEEAKGESQELLCILGLFHKMHELNIKPNVVTFSA 2090
            E  E+  +RV+QLF QL +E  +   ++ K   QEL CIL +F KMH+L IKPNVVTFSA
Sbjct: 621  ELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSA 680

Query: 2091 ILNACSRCNSFEDASVLLEELRLFDNQVYGVAHGLLMGSRENVWIQAQTLFDEVKRMDAS 2270
            ILNACSRCNSFEDAS+LLEELRLFDN+VYGV HGLLMG RENVW+QAQ+LFD+V  MD S
Sbjct: 681  ILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMDGS 740

Query: 2271 TASAFYNALTDVLWHFGQRQGAQLVVLEGNRRHVWENAWCVSCLDLHLMSSGAAQAMVHA 2450
            TASAFYNALTD+LWHFGQ++GA+LV LEG  R VWEN W  SCLDLHLMSSGAA+AMVHA
Sbjct: 741  TASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCLDLHLMSSGAARAMVHA 800

Query: 2451 WLLNIRSIVFEGHELPE-LSILTGWGKHSKVAGDGTLRRVVQALLIRIGAPFHVAKSNIG 2627
            WLLNIRSIV+EGHELP+ LSILTGWGKHSKV GDG L+R V+ LL  + APFH++K N+G
Sbjct: 801  WLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALKRAVEVLLRGMDAPFHLSKCNMG 860

Query: 2628 RFISTGSVVAAWLRESGTLKVLILHDDRTHPETLRLNQHTDMQ 2756
            RF S+GSVVA WLRES TLK+LILHD  +        + TD Q
Sbjct: 861  RFTSSGSVVATWLRESATLKLLILHDHISTTRATTTMKSTDQQ 903