BLASTX nr result
ID: Coptis21_contig00007739
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00007739 (303 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EEC77085.1| hypothetical protein OsI_15489 [Oryza sativa Indi... 56 3e-06 ref|NP_001052544.1| Os04g0357300 [Oryza sativa Japonica Group] g... 56 3e-06 emb|CAD40616.1| OSJNBb0066J23.21 [Oryza sativa Japonica Group] g... 56 3e-06 gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon... 56 3e-06 ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g... 56 3e-06 >gb|EEC77085.1| hypothetical protein OsI_15489 [Oryza sativa Indica Group] Length = 1412 Score = 56.2 bits (134), Expect = 3e-06 Identities = 29/55 (52%), Positives = 37/55 (67%) Frame = +1 Query: 73 SNLHDLLNNVYPDLSEQYEADPNYLTERTILSARNDDVSTINATALDMFPGEEIV 237 S+L L+ +VYP L++ ADPNY+T R ILS RND V IN +D F GEE+V Sbjct: 1273 SDLDKLMESVYPTLNDCL-ADPNYITSRAILSTRNDCVDNINLKMIDRFQGEEMV 1326 >ref|NP_001052544.1| Os04g0357300 [Oryza sativa Japonica Group] gi|113564115|dbj|BAF14458.1| Os04g0357300, partial [Oryza sativa Japonica Group] Length = 442 Score = 56.2 bits (134), Expect = 3e-06 Identities = 29/55 (52%), Positives = 37/55 (67%) Frame = +1 Query: 73 SNLHDLLNNVYPDLSEQYEADPNYLTERTILSARNDDVSTINATALDMFPGEEIV 237 S+L L+ +VYP L++ ADPNY+T R ILS RND V IN +D F GEE+V Sbjct: 303 SDLDKLMESVYPTLNDCL-ADPNYITSRAILSTRNDCVDNINLKMIDRFQGEEMV 356 >emb|CAD40616.1| OSJNBb0066J23.21 [Oryza sativa Japonica Group] gi|38346440|emb|CAE04434.2| OSJNBa0018J19.1 [Oryza sativa Japonica Group] gi|116309570|emb|CAH66630.1| OSIGBa0105P02.4 [Oryza sativa Indica Group] Length = 1746 Score = 56.2 bits (134), Expect = 3e-06 Identities = 29/55 (52%), Positives = 37/55 (67%) Frame = +1 Query: 73 SNLHDLLNNVYPDLSEQYEADPNYLTERTILSARNDDVSTINATALDMFPGEEIV 237 S+L L+ +VYP L++ ADPNY+T R ILS RND V IN +D F GEE+V Sbjct: 1607 SDLDKLMESVYPTLNDCL-ADPNYITSRAILSTRNDCVDNINLKMIDRFQGEEMV 1660 >gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group] Length = 1443 Score = 55.8 bits (133), Expect = 3e-06 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 5/76 (6%) Frame = +1 Query: 43 VQLPPEI-----QNCSNLHDLLNNVYPDLSEQYEADPNYLTERTILSARNDDVSTINATA 207 ++LP EI N +L++L++NV+P L ADPNY+T R ILS RN+ V IN Sbjct: 1188 IRLPDEICVPCTGNDDDLNNLIDNVFPMLDANL-ADPNYITSRAILSTRNEYVDQINMKM 1246 Query: 208 LDMFPGEEIVCLGADK 255 +D F GEE++ D+ Sbjct: 1247 IDRFRGEEMLYHSFDR 1262 >ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa Japonica Group] Length = 1575 Score = 55.8 bits (133), Expect = 3e-06 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 5/76 (6%) Frame = +1 Query: 43 VQLPPEI-----QNCSNLHDLLNNVYPDLSEQYEADPNYLTERTILSARNDDVSTINATA 207 ++LP EI N +L++L++NV+P L ADPNY+T R ILS RN+ V IN Sbjct: 1347 IRLPDEICVPCTGNDDDLNNLIDNVFPMLDANL-ADPNYITSRAILSTRNEYVDQINMKM 1405 Query: 208 LDMFPGEEIVCLGADK 255 +D F GEE++ D+ Sbjct: 1406 IDRFRGEEMLYHSFDR 1421