BLASTX nr result

ID: Coptis21_contig00007739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007739
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC77085.1| hypothetical protein OsI_15489 [Oryza sativa Indi...    56   3e-06
ref|NP_001052544.1| Os04g0357300 [Oryza sativa Japonica Group] g...    56   3e-06
emb|CAD40616.1| OSJNBb0066J23.21 [Oryza sativa Japonica Group] g...    56   3e-06
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon...    56   3e-06
ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g...    56   3e-06

>gb|EEC77085.1| hypothetical protein OsI_15489 [Oryza sativa Indica Group]
          Length = 1412

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/55 (52%), Positives = 37/55 (67%)
 Frame = +1

Query: 73   SNLHDLLNNVYPDLSEQYEADPNYLTERTILSARNDDVSTINATALDMFPGEEIV 237
            S+L  L+ +VYP L++   ADPNY+T R ILS RND V  IN   +D F GEE+V
Sbjct: 1273 SDLDKLMESVYPTLNDCL-ADPNYITSRAILSTRNDCVDNINLKMIDRFQGEEMV 1326


>ref|NP_001052544.1| Os04g0357300 [Oryza sativa Japonica Group]
           gi|113564115|dbj|BAF14458.1| Os04g0357300, partial
           [Oryza sativa Japonica Group]
          Length = 442

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/55 (52%), Positives = 37/55 (67%)
 Frame = +1

Query: 73  SNLHDLLNNVYPDLSEQYEADPNYLTERTILSARNDDVSTINATALDMFPGEEIV 237
           S+L  L+ +VYP L++   ADPNY+T R ILS RND V  IN   +D F GEE+V
Sbjct: 303 SDLDKLMESVYPTLNDCL-ADPNYITSRAILSTRNDCVDNINLKMIDRFQGEEMV 356


>emb|CAD40616.1| OSJNBb0066J23.21 [Oryza sativa Japonica Group]
            gi|38346440|emb|CAE04434.2| OSJNBa0018J19.1 [Oryza sativa
            Japonica Group] gi|116309570|emb|CAH66630.1|
            OSIGBa0105P02.4 [Oryza sativa Indica Group]
          Length = 1746

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/55 (52%), Positives = 37/55 (67%)
 Frame = +1

Query: 73   SNLHDLLNNVYPDLSEQYEADPNYLTERTILSARNDDVSTINATALDMFPGEEIV 237
            S+L  L+ +VYP L++   ADPNY+T R ILS RND V  IN   +D F GEE+V
Sbjct: 1607 SDLDKLMESVYPTLNDCL-ADPNYITSRAILSTRNDCVDNINLKMIDRFQGEEMV 1660


>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
          Length = 1443

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
 Frame = +1

Query: 43   VQLPPEI-----QNCSNLHDLLNNVYPDLSEQYEADPNYLTERTILSARNDDVSTINATA 207
            ++LP EI      N  +L++L++NV+P L     ADPNY+T R ILS RN+ V  IN   
Sbjct: 1188 IRLPDEICVPCTGNDDDLNNLIDNVFPMLDANL-ADPNYITSRAILSTRNEYVDQINMKM 1246

Query: 208  LDMFPGEEIVCLGADK 255
            +D F GEE++    D+
Sbjct: 1247 IDRFRGEEMLYHSFDR 1262


>ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group]
            gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa
            Japonica Group]
          Length = 1575

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
 Frame = +1

Query: 43   VQLPPEI-----QNCSNLHDLLNNVYPDLSEQYEADPNYLTERTILSARNDDVSTINATA 207
            ++LP EI      N  +L++L++NV+P L     ADPNY+T R ILS RN+ V  IN   
Sbjct: 1347 IRLPDEICVPCTGNDDDLNNLIDNVFPMLDANL-ADPNYITSRAILSTRNEYVDQINMKM 1405

Query: 208  LDMFPGEEIVCLGADK 255
            +D F GEE++    D+
Sbjct: 1406 IDRFRGEEMLYHSFDR 1421


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