BLASTX nr result

ID: Coptis21_contig00007585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007585
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164165.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-T1-4-...   119   3e-25
ref|XP_004140152.1| PREDICTED: cyclin-T1-4-like [Cucumis sativus]     119   3e-25
emb|CBI26220.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]           116   2e-24
emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera]   116   2e-24

>ref|XP_004164165.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-T1-4-like [Cucumis sativus]
          Length = 378

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/72 (77%), Positives = 63/72 (87%)
 Frame = -2

Query: 216 HASHDRFMVATAALFLAAKSEETARPLNDVLRASCEICHKQGLNFFPSLLPVDWFEQYRE 37
           HA HDRF++AT+ALFLAAKSEET RPLN+VLRASCEI HKQ  N    +LPVDWFEQYRE
Sbjct: 210 HACHDRFLIATSALFLAAKSEETPRPLNNVLRASCEILHKQDFNVLSYMLPVDWFEQYRE 269

Query: 36  RVTDAEQMILTT 1
           RVT+AEQ+ILTT
Sbjct: 270 RVTEAEQLILTT 281


>ref|XP_004140152.1| PREDICTED: cyclin-T1-4-like [Cucumis sativus]
          Length = 378

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/72 (77%), Positives = 63/72 (87%)
 Frame = -2

Query: 216 HASHDRFMVATAALFLAAKSEETARPLNDVLRASCEICHKQGLNFFPSLLPVDWFEQYRE 37
           HA HDRF++AT+ALFLAAKSEET RPLN+VLRASCEI HKQ  N    +LPVDWFEQYRE
Sbjct: 210 HACHDRFLIATSALFLAAKSEETPRPLNNVLRASCEILHKQDFNVLSYMLPVDWFEQYRE 269

Query: 36  RVTDAEQMILTT 1
           RVT+AEQ+ILTT
Sbjct: 270 RVTEAEQLILTT 281


>emb|CBI26220.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/72 (77%), Positives = 62/72 (86%)
 Frame = -2

Query: 216 HASHDRFMVATAALFLAAKSEETARPLNDVLRASCEICHKQGLNFFPSLLPVDWFEQYRE 37
           HA HDRF++ATA+LFLAAKSEET RPLN+V+RASCEI HK  L F   LLPVDWFEQYRE
Sbjct: 195 HACHDRFLIATASLFLAAKSEETQRPLNNVVRASCEILHKLDLTFLSYLLPVDWFEQYRE 254

Query: 36  RVTDAEQMILTT 1
           RV +AEQMILTT
Sbjct: 255 RVIEAEQMILTT 266


>ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]
          Length = 363

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/72 (77%), Positives = 62/72 (86%)
 Frame = -2

Query: 216 HASHDRFMVATAALFLAAKSEETARPLNDVLRASCEICHKQGLNFFPSLLPVDWFEQYRE 37
           HA HDRF++ATA+LFLAAKSEET RPLN+V+RASCEI HK  L F   LLPVDWFEQYRE
Sbjct: 195 HACHDRFLIATASLFLAAKSEETQRPLNNVVRASCEILHKLDLTFLSYLLPVDWFEQYRE 254

Query: 36  RVTDAEQMILTT 1
           RV +AEQMILTT
Sbjct: 255 RVIEAEQMILTT 266


>emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera]
          Length = 443

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/72 (77%), Positives = 62/72 (86%)
 Frame = -2

Query: 216 HASHDRFMVATAALFLAAKSEETARPLNDVLRASCEICHKQGLNFFPSLLPVDWFEQYRE 37
           HA HDRF++ATA+LFLAAKSEET RPLN+V+RASCEI HK  L F   LLPVDWFEQYRE
Sbjct: 195 HACHDRFLIATASLFLAAKSEETQRPLNNVVRASCEILHKLDLTFLSYLLPVDWFEQYRE 254

Query: 36  RVTDAEQMILTT 1
           RV +AEQMILTT
Sbjct: 255 RVIEAEQMILTT 266


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