BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007573
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30170.3| unnamed protein product [Vitis vinifera]              341   1e-91
ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vit...   341   1e-91
ref|XP_002323495.1| predicted protein [Populus trichocarpa] gi|2...   338   7e-91
ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like...   338   9e-91
ref|XP_004161259.1| PREDICTED: splicing factor 3A subunit 2-like...   336   3e-90

>emb|CBI30170.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  341 bits (874), Expect = 1e-91
 Identities = 170/229 (74%), Positives = 180/229 (78%)
 Frame = +2

Query: 50  MDRDWGSKPXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKXXXXX 229
           MDRDWGSKP        QNEAID           TIDLAKDPYFMRNHLGSYECK     
Sbjct: 1   MDRDWGSKPGTGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKL---- 56

Query: 230 XXXXXXXXXXXXXXXXXXXCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKESPALPQP 409
                              CLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKE+PA PQP
Sbjct: 57  -------------------CLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQP 97

Query: 410 HKRKVNLRKSVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRI 589
           HKRKV++RK+VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDL KPRHRFMSS+EQR+
Sbjct: 98  HKRKVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRV 157

Query: 590 ESCDKRYQYLLFAADPYEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTL 736
           +S DKRYQYLLFAA+PYEIIAFKVPS EIDKS+ K F+HWDPDSKMFTL
Sbjct: 158 QSFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTL 206


>ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vitis vinifera]
          Length = 357

 Score =  341 bits (874), Expect = 1e-91
 Identities = 170/229 (74%), Positives = 180/229 (78%)
 Frame = +2

Query: 50  MDRDWGSKPXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKXXXXX 229
           MDRDWGSKP        QNEAID           TIDLAKDPYFMRNHLGSYECK     
Sbjct: 1   MDRDWGSKPGTGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKL---- 56

Query: 230 XXXXXXXXXXXXXXXXXXXCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKESPALPQP 409
                              CLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKE+PA PQP
Sbjct: 57  -------------------CLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQP 97

Query: 410 HKRKVNLRKSVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRI 589
           HKRKV++RK+VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDL KPRHRFMSS+EQR+
Sbjct: 98  HKRKVSVRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRV 157

Query: 590 ESCDKRYQYLLFAADPYEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTL 736
           +S DKRYQYLLFAA+PYEIIAFKVPS EIDKS+ K F+HWDPDSKMFTL
Sbjct: 158 QSFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTL 206


>ref|XP_002323495.1| predicted protein [Populus trichocarpa] gi|222868125|gb|EEF05256.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  338 bits (867), Expect = 7e-91
 Identities = 169/229 (73%), Positives = 181/229 (79%)
 Frame = +2

Query: 50  MDRDWGSKPXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKXXXXX 229
           MDR+WGSKP        QNEAID           TIDLAKDPYFMRNHLGSYECK     
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKL---- 56

Query: 230 XXXXXXXXXXXXXXXXXXXCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKESPALPQP 409
                              CLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAK++PALPQP
Sbjct: 57  -------------------CLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPALPQP 97

Query: 410 HKRKVNLRKSVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRI 589
           +KRKVN+RK+VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIED TKPRHRFMSSYEQRI
Sbjct: 98  NKRKVNIRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSYEQRI 157

Query: 590 ESCDKRYQYLLFAADPYEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTL 736
           E+ DKR+QYLLF+A+PYEIIAFKVPS EIDKS+ K F+HWDPDSKMFTL
Sbjct: 158 EANDKRFQYLLFSAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTL 206


>ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like [Glycine max]
          Length = 350

 Score =  338 bits (866), Expect = 9e-91
 Identities = 168/229 (73%), Positives = 178/229 (77%)
 Frame = +2

Query: 50  MDRDWGSKPXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKXXXXX 229
           MDR+WGSKP        QNEAID           TIDLAKDPYFMRNHLGSYECK     
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKL---- 56

Query: 230 XXXXXXXXXXXXXXXXXXXCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKESPALPQP 409
                              CLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAK+SPA PQP
Sbjct: 57  -------------------CLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDSPAQPQP 97

Query: 410 HKRKVNLRKSVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRI 589
           HKRKV LRK+VKIGRPGYRVTKQ+DPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQR+
Sbjct: 98  HKRKVTLRKTVKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRV 157

Query: 590 ESCDKRYQYLLFAADPYEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTL 736
           +  DK YQYLLFAA+PYEI+AFKVPS EIDKS+ K F+HWDPDSKMFTL
Sbjct: 158 QPFDKSYQYLLFAAEPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTL 206


>ref|XP_004161259.1| PREDICTED: splicing factor 3A subunit 2-like [Cucumis sativus]
          Length = 341

 Score =  336 bits (861), Expect = 3e-90
 Identities = 168/229 (73%), Positives = 178/229 (77%)
 Frame = +2

Query: 50  MDRDWGSKPXXXXXXXXQNEAIDXXXXXXXXXXXTIDLAKDPYFMRNHLGSYECKXXXXX 229
           MDR+WGSKP        QNEAID           TIDLAKDPYFMRNHLGSYECK     
Sbjct: 1   MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKL---- 56

Query: 230 XXXXXXXXXXXXXXXXXXXCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKESPALPQP 409
                              CLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKE+PA PQP
Sbjct: 57  -------------------CLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQP 97

Query: 410 HKRKVNLRKSVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRI 589
           HKRKV++RK+VKIGRPGYRVTKQFD ETKQRSLLFQIEYPEIEDL KPRHRFMSSYEQR+
Sbjct: 98  HKRKVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRV 157

Query: 590 ESCDKRYQYLLFAADPYEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTL 736
           +  DKRYQYLLFAA+PYEIIAFKVPS EIDKS+ K F+HWDPDSKMFTL
Sbjct: 158 QPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTL 206