BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007553
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284772.1| PREDICTED: ribulose-phosphate 3-epimerase, c...   460   e-127
gb|AAC24709.1| ribulose-phosphate 3-epimerase transit form [Expr...   454   e-125
sp|Q43157.1|RPE_SPIOL RecName: Full=Ribulose-phosphate 3-epimera...   454   e-125
sp|Q43843.1|RPE_SOLTU RecName: Full=Ribulose-phosphate 3-epimera...   451   e-124
ref|XP_003524706.1| PREDICTED: ribulose-phosphate 3-epimerase, c...   450   e-124

>ref|XP_002284772.1| PREDICTED: ribulose-phosphate 3-epimerase, chloroplastic-like [Vitis
            vinifera]
          Length = 282

 Score =  460 bits (1184), Expect = e-127
 Identities = 242/271 (89%), Positives = 251/271 (92%), Gaps = 3/271 (1%)
 Frame = -3

Query: 1109 INGFGSNTLKLQNLSLSPHLS---SRRKYNRMEVKASSRVDKFSKSDIIVSPSILSANFA 939
            INGFG N  KLQ  SL    S   SRRK++   VKAS+RVDKFSKSDIIVSPSILSANFA
Sbjct: 15   INGFGVN--KLQRSSLFQPTSFTFSRRKFSST-VKASARVDKFSKSDIIVSPSILSANFA 71

Query: 938  KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQR 759
            KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL+V ALRPVTDLPLDVHLMIVEP+QR
Sbjct: 72   KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVGALRPVTDLPLDVHLMIVEPEQR 131

Query: 758  VPDFIKAGADIVSVHCEQASTIHLHRTINQIKSLGAKAGVVLNPGTPLTTIEYVLDCVDL 579
            VPDFIKAGADIVSVHCEQ+STIHLHRTINQIKSLGAKAGVVLNP TPL+TIEYVLD VDL
Sbjct: 132  VPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPATPLSTIEYVLDVVDL 191

Query: 578  VLIMSVNPGFGGQSFIESQVKKISDLRRMCVEKGVNPWIEVDGGVGPKNAYKVIEAGANA 399
            VLIMSVNPGFGGQSFIESQVKKISDLRR+C EKGVNPWIEVDGGVGP NAYKVIEAGANA
Sbjct: 192  VLIMSVNPGFGGQSFIESQVKKISDLRRICAEKGVNPWIEVDGGVGPANAYKVIEAGANA 251

Query: 398  LVAGSAVFGAKDYAEAIKGIKTSKKPVAVAV 306
            LVAGSAVFGAKDYAEAIKGIKTSK+PVAVAV
Sbjct: 252  LVAGSAVFGAKDYAEAIKGIKTSKRPVAVAV 282


>gb|AAC24709.1| ribulose-phosphate 3-epimerase transit form [Expression vector
            pFL505]
          Length = 285

 Score =  454 bits (1168), Expect = e-125
 Identities = 238/271 (87%), Positives = 249/271 (91%), Gaps = 3/271 (1%)
 Frame = -3

Query: 1109 INGF--GSNTLKLQNLSLSPH-LSSRRKYNRMEVKASSRVDKFSKSDIIVSPSILSANFA 939
            INGF  G N  KLQ  + SP+ L+  R+  +  VKA+SRVDKFSKSDIIVSPSILSANFA
Sbjct: 15   INGFCGGLNIRKLQPSTSSPNSLTFTRRKVQTLVKATSRVDKFSKSDIIVSPSILSANFA 74

Query: 938  KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQR 759
            KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEP+QR
Sbjct: 75   KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQR 134

Query: 758  VPDFIKAGADIVSVHCEQASTIHLHRTINQIKSLGAKAGVVLNPGTPLTTIEYVLDCVDL 579
            VPDFIKAGADIVSVHCE ASTIHLHRT+NQIKSLGAKAGVVLNPGTPL+TIEYVLD VDL
Sbjct: 135  VPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNPGTPLSTIEYVLDVVDL 194

Query: 578  VLIMSVNPGFGGQSFIESQVKKISDLRRMCVEKGVNPWIEVDGGVGPKNAYKVIEAGANA 399
            VLIMSVNPGFGGQSFIESQVKKISDLR+MCVEKGVNPWIEVDGGV P NAYKVIEAGANA
Sbjct: 195  VLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVDGGVTPANAYKVIEAGANA 254

Query: 398  LVAGSAVFGAKDYAEAIKGIKTSKKPVAVAV 306
            LVAGSAVFGAKDYAEAIKGIK SK+P  VAV
Sbjct: 255  LVAGSAVFGAKDYAEAIKGIKASKRPEPVAV 285


>sp|Q43157.1|RPE_SPIOL RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic; AltName:
            Full=Pentose-5-phosphate 3-epimerase; Short=PPE; AltName:
            Full=R5P3E; Short=RPE; Flags: Precursor
            gi|1162980|gb|AAC41677.1| ribulose-5-phosphate
            3-epimerase [Spinacia oleracea] gi|3264788|gb|AAC24708.1|
            ribulose-phosphate 3-epimerase [Spinacia oleracea]
            gi|1587969|prf||2207382A D-ribulose-5-phosphate
            3-epimerase
          Length = 285

 Score =  454 bits (1168), Expect = e-125
 Identities = 238/271 (87%), Positives = 249/271 (91%), Gaps = 3/271 (1%)
 Frame = -3

Query: 1109 INGF--GSNTLKLQNLSLSPH-LSSRRKYNRMEVKASSRVDKFSKSDIIVSPSILSANFA 939
            INGF  G N  KLQ  + SP+ L+  R+  +  VKA+SRVDKFSKSDIIVSPSILSANFA
Sbjct: 15   INGFCGGLNIRKLQPSTSSPNSLTFTRRKVQTLVKATSRVDKFSKSDIIVSPSILSANFA 74

Query: 938  KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQR 759
            KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEP+QR
Sbjct: 75   KLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQR 134

Query: 758  VPDFIKAGADIVSVHCEQASTIHLHRTINQIKSLGAKAGVVLNPGTPLTTIEYVLDCVDL 579
            VPDFIKAGADIVSVHCE ASTIHLHRT+NQIKSLGAKAGVVLNPGTPL+TIEYVLD VDL
Sbjct: 135  VPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNPGTPLSTIEYVLDVVDL 194

Query: 578  VLIMSVNPGFGGQSFIESQVKKISDLRRMCVEKGVNPWIEVDGGVGPKNAYKVIEAGANA 399
            VLIMSVNPGFGGQSFIESQVKKISDLR+MCVEKGVNPWIEVDGGV P NAYKVIEAGANA
Sbjct: 195  VLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVDGGVTPANAYKVIEAGANA 254

Query: 398  LVAGSAVFGAKDYAEAIKGIKTSKKPVAVAV 306
            LVAGSAVFGAKDYAEAIKGIK SK+P  VAV
Sbjct: 255  LVAGSAVFGAKDYAEAIKGIKASKRPEPVAV 285


>sp|Q43843.1|RPE_SOLTU RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic; AltName:
            Full=Pentose-5-phosphate 3-epimerase; Short=PPE; AltName:
            Full=R5P3E; Short=RPE; Flags: Precursor
            gi|902739|emb|CAA90426.1| pentose-5-phosphate-3-epimerase
            [Solanum tuberosum]
          Length = 280

 Score =  451 bits (1160), Expect = e-124
 Identities = 232/270 (85%), Positives = 248/270 (91%), Gaps = 2/270 (0%)
 Frame = -3

Query: 1109 INGFGSNTLKLQNLSLSP--HLSSRRKYNRMEVKASSRVDKFSKSDIIVSPSILSANFAK 936
            I+GFG +  KLQ +S S    L+  R+  +  V ASSRVDKFSKSDIIVSPSILSANF+K
Sbjct: 12   ISGFGGSQ-KLQKISFSNPNSLTFTRRRIQTVVNASSRVDKFSKSDIIVSPSILSANFSK 70

Query: 935  LGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQRV 756
            LGEQVKA+E AGCDWIHVDVMDGRFVPNITIGPLVVD+LRP+TDLPLDVHLMIVEPDQRV
Sbjct: 71   LGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQRV 130

Query: 755  PDFIKAGADIVSVHCEQASTIHLHRTINQIKSLGAKAGVVLNPGTPLTTIEYVLDCVDLV 576
            PDFIKAGADIVSVHCEQ+STIHLHRTINQIKSLGAKAGVVLNPGTPLT IEYVLD VDLV
Sbjct: 131  PDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLV 190

Query: 575  LIMSVNPGFGGQSFIESQVKKISDLRRMCVEKGVNPWIEVDGGVGPKNAYKVIEAGANAL 396
            LIMSVNPGFGGQSFIESQVKKISDLR++C E+G+NPWIEVDGGVGPKNAYKVIEAGANAL
Sbjct: 191  LIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANAL 250

Query: 395  VAGSAVFGAKDYAEAIKGIKTSKKPVAVAV 306
            VAGSAVFGA DYAEAIKGIKTSK+P AVAV
Sbjct: 251  VAGSAVFGAPDYAEAIKGIKTSKRPEAVAV 280


>ref|XP_003524706.1| PREDICTED: ribulose-phosphate 3-epimerase, chloroplastic-like
            [Glycine max]
          Length = 280

 Score =  450 bits (1157), Expect = e-124
 Identities = 233/268 (86%), Positives = 244/268 (91%)
 Frame = -3

Query: 1109 INGFGSNTLKLQNLSLSPHLSSRRKYNRMEVKASSRVDKFSKSDIIVSPSILSANFAKLG 930
            INGF    L   +LS    L+  RK     VKA+SRVDKFSKSDIIVSPSILSANFAKLG
Sbjct: 16   INGF---CLHKTSLSHPRSLTFSRKKISTTVKATSRVDKFSKSDIIVSPSILSANFAKLG 72

Query: 929  EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQRVPD 750
            EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEP+QRVPD
Sbjct: 73   EQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPD 132

Query: 749  FIKAGADIVSVHCEQASTIHLHRTINQIKSLGAKAGVVLNPGTPLTTIEYVLDCVDLVLI 570
            FIKAGADIVSVHCEQ+STIHLHRT+NQ+KSLGAKAGVVLNP TPL+ IEYVLD VDLVLI
Sbjct: 133  FIKAGADIVSVHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPATPLSAIEYVLDVVDLVLI 192

Query: 569  MSVNPGFGGQSFIESQVKKISDLRRMCVEKGVNPWIEVDGGVGPKNAYKVIEAGANALVA 390
            MSVNPGFGGQSFIESQVKKISDLRR+C EKGVNPWIEVDGGVGP NAYKVIEAGANALVA
Sbjct: 193  MSVNPGFGGQSFIESQVKKISDLRRVCAEKGVNPWIEVDGGVGPANAYKVIEAGANALVA 252

Query: 389  GSAVFGAKDYAEAIKGIKTSKKPVAVAV 306
            GSAVFGAKDYAEAI+GIKTSK+P AVAV
Sbjct: 253  GSAVFGAKDYAEAIRGIKTSKRPEAVAV 280