BLASTX nr result

ID: Coptis21_contig00007534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007534
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273286.2| PREDICTED: 40S ribosomal protein S10-like [V...   181   1e-43
emb|CBI22651.3| unnamed protein product [Vitis vinifera]              181   1e-43
gb|ABB55361.1| 40S ribosomal protein S10-like [Solanum tuberosum...   180   2e-43
ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [V...   177   2e-42
emb|CBI34383.3| unnamed protein product [Vitis vinifera]              177   2e-42

>ref|XP_002273286.2| PREDICTED: 40S ribosomal protein S10-like [Vitis vinifera]
          Length = 187

 Score =  181 bits (460), Expect = 1e-43
 Identities = 93/143 (65%), Positives = 98/143 (68%)
 Frame = -3

Query: 727 KYLFQEGVCFAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG 548
           KYLFQEGVC+AKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG
Sbjct: 20  KYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG 79

Query: 547 IEFLRTYLNLPSEIVPATLKKSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368
           IEFLRTYLNLPSEIVPATLKKS+K                                    
Sbjct: 80  IEFLRTYLNLPSEIVPATLKKSVKPPGRPMGGPPGDRPRGPPRFDGDRPRFGDRDGYRGG 139

Query: 367 XXXXXXXXXGEKGGAPAEFQPSF 299
                    G+KGGAPA+FQPSF
Sbjct: 140 PRGPPGEFGGDKGGAPADFQPSF 162


>emb|CBI22651.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  181 bits (460), Expect = 1e-43
 Identities = 93/143 (65%), Positives = 98/143 (68%)
 Frame = -3

Query: 727 KYLFQEGVCFAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG 548
           KYLFQEGVC+AKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG
Sbjct: 48  KYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG 107

Query: 547 IEFLRTYLNLPSEIVPATLKKSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368
           IEFLRTYLNLPSEIVPATLKKS+K                                    
Sbjct: 108 IEFLRTYLNLPSEIVPATLKKSVKPPGRPMGGPPGDRPRGPPRFDGDRPRFGDRDGYRGG 167

Query: 367 XXXXXXXXXGEKGGAPAEFQPSF 299
                    G+KGGAPA+FQPSF
Sbjct: 168 PRGPPGEFGGDKGGAPADFQPSF 190


>gb|ABB55361.1| 40S ribosomal protein S10-like [Solanum tuberosum]
           gi|82400160|gb|ABB72819.1| 40S ribosomal protein
           S10-like protein [Solanum tuberosum]
          Length = 180

 Score =  180 bits (457), Expect = 2e-43
 Identities = 93/143 (65%), Positives = 97/143 (67%)
 Frame = -3

Query: 727 KYLFQEGVCFAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG 548
           KYLFQEGVCFAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG
Sbjct: 13  KYLFQEGVCFAKKDYNLAKHPNIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG 72

Query: 547 IEFLRTYLNLPSEIVPATLKKSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368
           IEFLRTYLNLPSEIVPATLKKS K                                    
Sbjct: 73  IEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDRPRFGDRDGYRAG 132

Query: 367 XXXXXXXXXGEKGGAPAEFQPSF 299
                    GEKGGAPA++QP+F
Sbjct: 133 PRGPPGEFGGEKGGAPADYQPAF 155


>ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [Vitis vinifera]
          Length = 180

 Score =  177 bits (450), Expect = 2e-42
 Identities = 93/143 (65%), Positives = 98/143 (68%)
 Frame = -3

Query: 727 KYLFQEGVCFAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG 548
           KYLFQEGVC+AKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG
Sbjct: 13  KYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG 72

Query: 547 IEFLRTYLNLPSEIVPATLKKSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368
           IEFLRTYLNLPSEIVPATLKKS+K                                    
Sbjct: 73  IEFLRTYLNLPSEIVPATLKKSVK--PAGRPMGPPGDRPRGPPRFEGDRPRFGDRDGYRG 130

Query: 367 XXXXXXXXXGEKGGAPAEFQPSF 299
                    G+KGGAPA++QPSF
Sbjct: 131 GPRGPPGEFGDKGGAPADYQPSF 153


>emb|CBI34383.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score =  177 bits (450), Expect = 2e-42
 Identities = 93/143 (65%), Positives = 98/143 (68%)
 Frame = -3

Query: 727 KYLFQEGVCFAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG 548
           KYLFQEGVC+AKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG
Sbjct: 43  KYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDG 102

Query: 547 IEFLRTYLNLPSEIVPATLKKSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368
           IEFLRTYLNLPSEIVPATLKKS+K                                    
Sbjct: 103 IEFLRTYLNLPSEIVPATLKKSVK--PAGRPMGPPGDRPRGPPRFEGDRPRFGDRDGYRG 160

Query: 367 XXXXXXXXXGEKGGAPAEFQPSF 299
                    G+KGGAPA++QPSF
Sbjct: 161 GPRGPPGEFGDKGGAPADYQPSF 183


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