BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007311
         (1451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509739.1| replication factor C / DNA polymerase III ga...   599   e-169
ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-li...   599   e-169
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li...   596   e-168
ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-li...   596   e-168
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V...   593   e-167

>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223549638|gb|EEF51126.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 333

 Score =  599 bits (1545), Expect = e-169
 Identities = 294/320 (91%), Positives = 315/320 (98%)
 Frame = -1

Query: 1313 YEIPWVEKYRPTKVADVVGNEDALSRLQVIARDGNLPNLILTGPPGTGKTTSILALAHEL 1134
            Y++PWVEKYRP+K+ D+VGNEDA+SRLQVIARDGN+PNLIL+GPPGTGKTTSILALAHEL
Sbjct: 13   YDVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 72

Query: 1133 LGSNCKEAVLELNASNDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQA 954
            LG N KEAVLELNAS+DRGIDVVRNKIKMFAQKKVTLPPGRHK+VILDEADSMTSGAQQA
Sbjct: 73   LGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQA 132

Query: 953  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIQAEKVPY 774
            LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRL+IV+QAEKVPY
Sbjct: 133  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLIIVVQAEKVPY 192

Query: 773  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 594
            VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVR+++EG
Sbjct: 193  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRHVMEG 252

Query: 593  NFDDACAGLKQLYNLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 414
             +DDAC+GLKQLY+LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS
Sbjct: 253  KYDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 312

Query: 413  LLQLCGLLAKLSLVRETAKA 354
             LQLCGLLAKL+LVR+TA+A
Sbjct: 313  YLQLCGLLAKLALVRDTARA 332


>ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
          Length = 331

 Score =  599 bits (1544), Expect = e-169
 Identities = 296/321 (92%), Positives = 316/321 (98%), Gaps = 1/321 (0%)
 Frame = -1

Query: 1313 YEIPWVEKYRPTKVADVVGNEDALSRLQVIARDGNLPNLILTGPPGTGKTTSILALAHEL 1134
            Y++PWVEKYRP+KVAD+VGNEDA+SRLQVIARDGN+PNLIL+GPPGTGKTTSILALAHEL
Sbjct: 10   YDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 69

Query: 1133 LGS-NCKEAVLELNASNDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQ 957
            LG  NCKEAVLELNAS+DRGIDVVRNKIKMFAQKKVTL PGRHKIVILDEADSMT+GAQQ
Sbjct: 70   LGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILDEADSMTTGAQQ 129

Query: 956  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIQAEKVP 777
            ALRRTMEIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRLSDQEILGRLM+V+QAEKVP
Sbjct: 130  ALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVP 189

Query: 776  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 597
            YVPEGLEAIIFTADGDMRQALNNLQATYSGF+FVNQ NVFKVCDQPHPLHVKNMVRN++E
Sbjct: 190  YVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIE 249

Query: 596  GNFDDACAGLKQLYNLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 417
            GNFD+AC+GLKQLY+LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG
Sbjct: 250  GNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 309

Query: 416  SLLQLCGLLAKLSLVRETAKA 354
            S LQLCGLLAKLSLVRETAKA
Sbjct: 310  SYLQLCGLLAKLSLVRETAKA 330


>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
            gi|449494241|ref|XP_004159490.1| PREDICTED: replication
            factor C subunit 2-like [Cucumis sativus]
          Length = 331

 Score =  596 bits (1536), Expect = e-168
 Identities = 293/320 (91%), Positives = 312/320 (97%)
 Frame = -1

Query: 1313 YEIPWVEKYRPTKVADVVGNEDALSRLQVIARDGNLPNLILTGPPGTGKTTSILALAHEL 1134
            Y+IPWVEKYRP KV D+VGNEDA+SRLQVIARDGN+PNLIL+GPPGTGKTTSILALAHEL
Sbjct: 11   YDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 70

Query: 1133 LGSNCKEAVLELNASNDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQA 954
            LG N KE VLELNAS+DRGIDVVRNKIKMFAQKKVTLPPGRHK+VILDEADSMT+GAQQA
Sbjct: 71   LGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTTGAQQA 130

Query: 953  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIQAEKVPY 774
            LRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRFSRL+DQEILGRLM+VIQAEKVPY
Sbjct: 131  LRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQAEKVPY 190

Query: 773  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 594
            VPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQ+NVFKVCDQPHPLHVKN+VRN+LEG
Sbjct: 191  VPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEG 250

Query: 593  NFDDACAGLKQLYNLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 414
             FDDAC GL+QLY+LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS
Sbjct: 251  KFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 310

Query: 413  LLQLCGLLAKLSLVRETAKA 354
             LQLCGLLAKLS+VRETAKA
Sbjct: 311  YLQLCGLLAKLSMVRETAKA 330


>ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
          Length = 332

 Score =  596 bits (1536), Expect = e-168
 Identities = 295/321 (91%), Positives = 315/321 (98%), Gaps = 1/321 (0%)
 Frame = -1

Query: 1313 YEIPWVEKYRPTKVADVVGNEDALSRLQVIARDGNLPNLILTGPPGTGKTTSILALAHEL 1134
            Y++PWVEKYRP+KVAD+VGNEDA+SRLQVIARDGN+PNLIL+GPPGTGKTTSILALAHEL
Sbjct: 11   YDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 70

Query: 1133 LGS-NCKEAVLELNASNDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQ 957
            LG  NCKEAVLELNAS+DRGIDVVRNKIKMFAQKKVTL PGRHKIVILDEADSMT+GAQQ
Sbjct: 71   LGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILDEADSMTTGAQQ 130

Query: 956  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIQAEKVP 777
            ALRRTMEIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRLSDQEILGRLM+V+QAEKVP
Sbjct: 131  ALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVP 190

Query: 776  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 597
            YVPEGLEAIIFTADGDMRQALNNLQATYSGF+FVNQ NVFKVCDQPHPLHVKNMV N++E
Sbjct: 191  YVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVCNVIE 250

Query: 596  GNFDDACAGLKQLYNLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 417
            GNFD+AC+GLKQLY+LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG
Sbjct: 251  GNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310

Query: 416  SLLQLCGLLAKLSLVRETAKA 354
            S LQLCGLLAKLSLVRETAKA
Sbjct: 311  SYLQLCGLLAKLSLVRETAKA 331


>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
            gi|297742576|emb|CBI34725.3| unnamed protein product
            [Vitis vinifera]
          Length = 330

 Score =  593 bits (1528), Expect = e-167
 Identities = 292/320 (91%), Positives = 312/320 (97%)
 Frame = -1

Query: 1313 YEIPWVEKYRPTKVADVVGNEDALSRLQVIARDGNLPNLILTGPPGTGKTTSILALAHEL 1134
            Y++PWVEKYRPTKVAD+VGNED +SRLQVIARDGN+PNLIL+GPPGTGKTTS+LALAHEL
Sbjct: 10   YDMPWVEKYRPTKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKTTSVLALAHEL 69

Query: 1133 LGSNCKEAVLELNASNDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQA 954
            LG+N +EAVLELNAS+DRGIDVVRNKIKMFAQKKVTLP G HKIVILDEADSMT+GAQQA
Sbjct: 70   LGANYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGSHKIVILDEADSMTTGAQQA 129

Query: 953  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIQAEKVPY 774
            LRRTMEIYSNSTRFALACN SSKIIEPIQSRCA+VRFSRLSDQEILGRLM+V++AEKVP+
Sbjct: 130  LRRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVEAEKVPF 189

Query: 773  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 594
            VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRN+LEG
Sbjct: 190  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLEG 249

Query: 593  NFDDACAGLKQLYNLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 414
             FDDAC GLKQLY+LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS
Sbjct: 250  KFDDACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 309

Query: 413  LLQLCGLLAKLSLVRETAKA 354
             LQLCGLLAKL++VRETAKA
Sbjct: 310  YLQLCGLLAKLAVVRETAKA 329