BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006989
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q42699.1|METE_CATRO RecName: Full=5-methyltetrahydropteroyltr...   154   7e-36
ref|XP_002313635.1| vitamin-b12 independent methionine synthase,...   151   6e-35
pdb|1U1H|A Chain A, A. Thaliana Cobalamine Independent Methionin...   150   8e-35
ref|XP_002871787.1| cobalamin-independent methionine synthase [A...   150   8e-35
ref|NP_197294.1| 5-methyltetrahydropteroyltriglutamate--homocyst...   150   8e-35

>sp|Q42699.1|METE_CATRO RecName: Full=5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase; AltName: Full=Cobalamin-independent
           methionine synthase isozyme; AltName:
           Full=Vitamin-B12-independent methionine synthase isozyme
           gi|886471|emb|CAA58474.1| methionine synthase
           [Catharanthus roseus]
          Length = 765

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/84 (89%), Positives = 80/84 (95%)
 Frame = -3

Query: 253 TYFADVPAEAYKTITSLKVVTGFGFDLVRGAKTLDLIKGGFPSGKYLFAGLVDGRNIWAN 74
           TYFAD+PAE YK +T+LK VTGFGFDLVRGAKTLDLIKGGFPSGKYLFAG+VDGRNIWAN
Sbjct: 242 TYFADIPAETYKILTALKGVTGFGFDLVRGAKTLDLIKGGFPSGKYLFAGVVDGRNIWAN 301

Query: 73  DLTASLSTLQALEGIVGKDKLVVS 2
           DL ASLSTLQ+LEGIVGKDKLVVS
Sbjct: 302 DLAASLSTLQSLEGIVGKDKLVVS 325


>ref|XP_002313635.1| vitamin-b12 independent methionine synthase,
           5-methyltetrahydropteroyltriglutamate-homocysteine
           [Populus trichocarpa] gi|222850043|gb|EEE87590.1|
           vitamin-b12 independent methionine synthase,
           5-methyltetrahydropteroyltriglutamate-homocysteine
           [Populus trichocarpa]
          Length = 765

 Score =  151 bits (381), Expect = 6e-35
 Identities = 74/84 (88%), Positives = 77/84 (91%)
 Frame = -3

Query: 253 TYFADVPAEAYKTITSLKVVTGFGFDLVRGAKTLDLIKGGFPSGKYLFAGLVDGRNIWAN 74
           TYFADVP EAYKT+ SLK VTGFGFDLVRG KTLDLIKGGFPSGKYLFAG+VDGRNIWAN
Sbjct: 242 TYFADVPVEAYKTLISLKCVTGFGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWAN 301

Query: 73  DLTASLSTLQALEGIVGKDKLVVS 2
           DL +SLS L ALEGIVGKDKLVVS
Sbjct: 302 DLASSLSVLHALEGIVGKDKLVVS 325


>pdb|1U1H|A Chain A, A. Thaliana Cobalamine Independent Methionine Synthase
           gi|55670113|pdb|1U1J|A Chain A, A. Thaliana Cobalamine
           Independent Methionine Synthase gi|55670130|pdb|1U1U|A
           Chain A, A. Thaliana Cobalamine Independent Methionine
           Synthase gi|55670137|pdb|1U22|A Chain A, A. Thaliana
           Cobalamine Independent Methionine Synthase
          Length = 765

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/84 (86%), Positives = 77/84 (91%)
 Frame = -3

Query: 253 TYFADVPAEAYKTITSLKVVTGFGFDLVRGAKTLDLIKGGFPSGKYLFAGLVDGRNIWAN 74
           TYFAD+PAEAYKT+TSLK VT FGFDLVRG KTLDL+K GFP GKYLFAG+VDGRNIWAN
Sbjct: 242 TYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWAN 301

Query: 73  DLTASLSTLQALEGIVGKDKLVVS 2
           D  ASLSTLQALEGIVGKDKLVVS
Sbjct: 302 DFAASLSTLQALEGIVGKDKLVVS 325


>ref|XP_002871787.1| cobalamin-independent methionine synthase [Arabidopsis lyrata
           subsp. lyrata] gi|297317624|gb|EFH48046.1|
           cobalamin-independent methionine synthase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 765

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/84 (86%), Positives = 77/84 (91%)
 Frame = -3

Query: 253 TYFADVPAEAYKTITSLKVVTGFGFDLVRGAKTLDLIKGGFPSGKYLFAGLVDGRNIWAN 74
           TYFAD+PAEAYKT+TSLK VT FGFDLVRG KTLDL+K GFP GKYLFAG+VDGRNIWAN
Sbjct: 242 TYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWAN 301

Query: 73  DLTASLSTLQALEGIVGKDKLVVS 2
           D  ASLSTLQALEGIVGKDKLVVS
Sbjct: 302 DFAASLSTLQALEGIVGKDKLVVS 325


>ref|NP_197294.1| 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Arabidopsis thaliana]
           gi|145334507|ref|NP_001078599.1|
           5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Arabidopsis thaliana]
           gi|8134566|sp|O50008.1|METE_ARATH RecName:
           Full=5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase; AltName: Full=Cobalamin-independent
           methionine synthase isozyme; AltName:
           Full=Vitamin-B12-independent methionine synthase isozyme
           gi|13877643|gb|AAK43899.1|AF370522_1
           cobalamin-independent methionine synthase [Arabidopsis
           thaliana] gi|2738248|gb|AAC50037.1|
           cobalamin-independent methionine synthase [Arabidopsis
           thaliana] gi|10177894|dbj|BAB11226.1|
           cobalamin-independent methionine synthase [Arabidopsis
           thaliana] gi|15081618|gb|AAK82464.1| AT5g17920/MPI7_60
           [Arabidopsis thaliana] gi|15810169|gb|AAL06986.1|
           AT5g17920/MPI7_60 [Arabidopsis thaliana]
           gi|15982785|gb|AAL09740.1| AT5g17920/MPI7_60
           [Arabidopsis thaliana] gi|17978930|gb|AAL47432.1|
           AT5g17920/MPI7_60 [Arabidopsis thaliana]
           gi|17979547|gb|AAL50108.1| AT5g17920/MPI7_60
           [Arabidopsis thaliana] gi|20147149|gb|AAM10291.1|
           AT5g17920/MPI7_60 [Arabidopsis thaliana]
           gi|332005103|gb|AED92486.1|
           5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Arabidopsis thaliana]
           gi|332005104|gb|AED92487.1|
           5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Arabidopsis thaliana]
          Length = 765

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/84 (86%), Positives = 77/84 (91%)
 Frame = -3

Query: 253 TYFADVPAEAYKTITSLKVVTGFGFDLVRGAKTLDLIKGGFPSGKYLFAGLVDGRNIWAN 74
           TYFAD+PAEAYKT+TSLK VT FGFDLVRG KTLDL+K GFP GKYLFAG+VDGRNIWAN
Sbjct: 242 TYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWAN 301

Query: 73  DLTASLSTLQALEGIVGKDKLVVS 2
           D  ASLSTLQALEGIVGKDKLVVS
Sbjct: 302 DFAASLSTLQALEGIVGKDKLVVS 325