BLASTX nr result

ID: Coptis21_contig00006978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006978
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79818.1|AC007396_19 T4O12.23 [Arabidopsis thaliana]              86   2e-15
ref|NP_177728.1| Thioredoxin superfamily protein [Arabidopsis th...    86   2e-15
ref|XP_002889053.1| hypothetical protein ARALYDRAFT_895477 [Arab...    86   2e-15
ref|XP_003634361.1| PREDICTED: uncharacterized protein LOC100854...    86   3e-15
emb|CBI18930.3| unnamed protein product [Vitis vinifera]               86   3e-15

>gb|AAF79818.1|AC007396_19 T4O12.23 [Arabidopsis thaliana]
          Length = 263

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 36/56 (64%), Positives = 45/56 (80%)
 Frame = -3

Query: 170 PAKLDGFVYNKNHRRMEDSIIIEAFFDPVCPDSRDAWPPLKQILQHYGSCISLIVH 3
           P + DGFVY   HR   D+I+IEA+FDPVCPDSRD+WPPLKQ L HYGS ++L++H
Sbjct: 24  PVRQDGFVYPPGHRFDPDTILIEAYFDPVCPDSRDSWPPLKQALHHYGSRVALLLH 79


>ref|NP_177728.1| Thioredoxin superfamily protein [Arabidopsis thaliana]
           gi|117168227|gb|ABK32196.1| At1g76020 [Arabidopsis
           thaliana] gi|332197664|gb|AEE35785.1| Thioredoxin
           superfamily protein [Arabidopsis thaliana]
          Length = 225

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 36/56 (64%), Positives = 45/56 (80%)
 Frame = -3

Query: 170 PAKLDGFVYNKNHRRMEDSIIIEAFFDPVCPDSRDAWPPLKQILQHYGSCISLIVH 3
           P + DGFVY   HR   D+I+IEA+FDPVCPDSRD+WPPLKQ L HYGS ++L++H
Sbjct: 24  PVRQDGFVYPPGHRFDPDTILIEAYFDPVCPDSRDSWPPLKQALHHYGSRVALLLH 79


>ref|XP_002889053.1| hypothetical protein ARALYDRAFT_895477 [Arabidopsis lyrata subsp.
           lyrata] gi|297334894|gb|EFH65312.1| hypothetical protein
           ARALYDRAFT_895477 [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 36/56 (64%), Positives = 45/56 (80%)
 Frame = -3

Query: 170 PAKLDGFVYNKNHRRMEDSIIIEAFFDPVCPDSRDAWPPLKQILQHYGSCISLIVH 3
           P K DGFVY   HR   D+I+IEA+FDPVCPDSRD+WPPLKQ L+HYGS ++ ++H
Sbjct: 25  PVKQDGFVYPPGHRFDPDTILIEAYFDPVCPDSRDSWPPLKQALRHYGSRVAFLLH 80


>ref|XP_003634361.1| PREDICTED: uncharacterized protein LOC100854733 [Vitis vinifera]
          Length = 234

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/60 (68%), Positives = 48/60 (80%)
 Frame = -3

Query: 182 SLSIPAKLDGFVYNKNHRRMEDSIIIEAFFDPVCPDSRDAWPPLKQILQHYGSCISLIVH 3
           ++SIPAK DGFVYN     + DSIIIEAFFDPVCPDSRDAWPPLK+ + +Y   +SLIVH
Sbjct: 30  AVSIPAKFDGFVYNYTGTGI-DSIIIEAFFDPVCPDSRDAWPPLKRAIAYYAPRVSLIVH 88


>emb|CBI18930.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/60 (68%), Positives = 48/60 (80%)
 Frame = -3

Query: 182 SLSIPAKLDGFVYNKNHRRMEDSIIIEAFFDPVCPDSRDAWPPLKQILQHYGSCISLIVH 3
           ++SIPAK DGFVYN     + DSIIIEAFFDPVCPDSRDAWPPLK+ + +Y   +SLIVH
Sbjct: 30  AVSIPAKFDGFVYNYTGTGI-DSIIIEAFFDPVCPDSRDAWPPLKRAIAYYAPRVSLIVH 88


Top