BLASTX nr result

ID: Coptis21_contig00006940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006940
         (1247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299239.1| predicted protein [Populus trichocarpa] gi|2...   116   1e-23
gb|AFK43113.1| unknown [Lotus japonicus]                              114   5e-23
ref|NP_001239870.1| uncharacterized protein LOC100791084 [Glycin...   114   7e-23
ref|XP_002532148.1| catalytic, putative [Ricinus communis] gi|22...   112   2e-22
dbj|BAC99750.1| unknown protein [Oryza sativa Japonica Group] gi...   111   4e-22

>ref|XP_002299239.1| predicted protein [Populus trichocarpa] gi|222846497|gb|EEE84044.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score =  116 bits (291), Expect = 1e-23
 Identities = 56/76 (73%), Positives = 67/76 (88%)
 Frame = +3

Query: 99  RLTGLQKQVLALYGGFLRAARVKAPEERKKIEVIVSEEFRRNAKEVDRKNFIYIEYLLRR 278
           RL+G+QKQVL LY GFLRAAR K+PE+R++IE  VS EFRRN+K+VDRKNFIYIEYLLRR
Sbjct: 10  RLSGMQKQVLTLYRGFLRAARSKSPEDRRQIESFVSAEFRRNSKQVDRKNFIYIEYLLRR 69

Query: 279 GAKQLEQLKSPNTISM 326
           G KQLEQL SP+T+ +
Sbjct: 70  GKKQLEQLNSPDTVGL 85


>gb|AFK43113.1| unknown [Lotus japonicus]
          Length = 91

 Score =  114 bits (285), Expect = 5e-23
 Identities = 54/78 (69%), Positives = 69/78 (88%)
 Frame = +3

Query: 93  MKRLTGLQKQVLALYGGFLRAARVKAPEERKKIEVIVSEEFRRNAKEVDRKNFIYIEYLL 272
           ++RL+G+QKQVL+LY GFLRAAR K+ EER+ +E IVS+EFRRN+KEVDRKNF+YIEYLL
Sbjct: 3   VQRLSGMQKQVLSLYRGFLRAARSKSEEERRNMESIVSQEFRRNSKEVDRKNFLYIEYLL 62

Query: 273 RRGAKQLEQLKSPNTISM 326
           RRG +QL+QLK+P T  +
Sbjct: 63  RRGTRQLDQLKNPGTTGL 80


>ref|NP_001239870.1| uncharacterized protein LOC100791084 [Glycine max]
           gi|255637377|gb|ACU19017.1| unknown [Glycine max]
          Length = 97

 Score =  114 bits (284), Expect = 7e-23
 Identities = 55/78 (70%), Positives = 69/78 (88%)
 Frame = +3

Query: 93  MKRLTGLQKQVLALYGGFLRAARVKAPEERKKIEVIVSEEFRRNAKEVDRKNFIYIEYLL 272
           ++RL+G+QKQVL+LY GFLRAAR K+ EER KIE I+S+EFRRNA++VDRKNF+YIEYLL
Sbjct: 6   VQRLSGMQKQVLSLYRGFLRAARSKSEEERCKIESIISQEFRRNAEDVDRKNFLYIEYLL 65

Query: 273 RRGAKQLEQLKSPNTISM 326
           RRG KQL+QLK+P T  +
Sbjct: 66  RRGNKQLDQLKNPGTTGL 83


>ref|XP_002532148.1| catalytic, putative [Ricinus communis] gi|223528158|gb|EEF30222.1|
           catalytic, putative [Ricinus communis]
          Length = 93

 Score =  112 bits (281), Expect = 2e-22
 Identities = 52/76 (68%), Positives = 68/76 (89%)
 Frame = +3

Query: 99  RLTGLQKQVLALYGGFLRAARVKAPEERKKIEVIVSEEFRRNAKEVDRKNFIYIEYLLRR 278
           +L+G+QKQVL+LY  FLRAAR+K+PE+R++IE +VS EFRRN+KEVDRKNF+YIEYL+RR
Sbjct: 8   KLSGMQKQVLSLYRSFLRAARLKSPEDRRQIESLVSAEFRRNSKEVDRKNFLYIEYLIRR 67

Query: 279 GAKQLEQLKSPNTISM 326
           G KQL+QLKSP  + +
Sbjct: 68  GRKQLDQLKSPGILGL 83


>dbj|BAC99750.1| unknown protein [Oryza sativa Japonica Group]
           gi|37806067|dbj|BAC99518.1| unknown protein [Oryza
           sativa Japonica Group]
          Length = 96

 Score =  111 bits (277), Expect = 4e-22
 Identities = 52/78 (66%), Positives = 65/78 (83%)
 Frame = +3

Query: 99  RLTGLQKQVLALYGGFLRAARVKAPEERKKIEVIVSEEFRRNAKEVDRKNFIYIEYLLRR 278
           +L+G+Q+QVLALY GFLR AR+K+PEER +IE +VS EFR NA+ +DRKNF+YIEYLLRR
Sbjct: 6   KLSGIQRQVLALYRGFLRTARLKSPEERHRIESVVSAEFRENARNIDRKNFVYIEYLLRR 65

Query: 279 GAKQLEQLKSPNTISMFT 332
           G KQLEQLK P+   + T
Sbjct: 66  GKKQLEQLKDPDITGLST 83


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