BLASTX nr result

ID: Coptis21_contig00006920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006920
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280089.1| PREDICTED: GA-binding protein subunit beta-2...   204   8e-51
ref|XP_002530899.1| ankyrin repeat-containing protein, putative ...   200   9e-50
ref|XP_002313998.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49
ref|XP_003602050.1| Ankyrin repeat domain-containing protein [Me...   197   1e-48
gb|ABK93753.1| unknown [Populus trichocarpa]                          196   1e-48

>ref|XP_002280089.1| PREDICTED: GA-binding protein subunit beta-2 [Vitis vinifera]
           gi|296083850|emb|CBI24238.3| unnamed protein product
           [Vitis vinifera]
          Length = 150

 Score =  204 bits (518), Expect = 8e-51
 Identities = 101/133 (75%), Positives = 118/133 (88%)
 Frame = -2

Query: 399 EGSPVQPPSGEDVDALLEAARYDDIDDLTSLASSGVPLDSKDSEGRTALHMAAANGHLNV 220
           E +  +  S E+V+ALLEAARYDDIDD+  +AS+GV LDSKDS+GRTALHMAAANGHL+V
Sbjct: 4   EEASAETASQENVEALLEAARYDDIDDVKIIASAGVSLDSKDSQGRTALHMAAANGHLDV 63

Query: 219 VEFLIQNGVDLNAYNVEKNTALHWACLNGHIEVVKNLIMAGADLSILNSHERSPVDEAVS 40
           VEFLI +GVDLNA NVEKNT LHWACLNGHIEVVKNLI+AGA+++ LNSHER+P+DEAVS
Sbjct: 64  VEFLISSGVDLNASNVEKNTPLHWACLNGHIEVVKNLILAGANVTALNSHERTPMDEAVS 123

Query: 39  HGKMEVIDAINEA 1
            GKM+VIDAIN A
Sbjct: 124 RGKMDVIDAINAA 136


>ref|XP_002530899.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223529521|gb|EEF31475.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 156

 Score =  200 bits (509), Expect = 9e-50
 Identities = 103/138 (74%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
 Frame = -2

Query: 411 MGVEEGSPVQ-PPSGEDVDALLEAARYDDIDDLTSLASSGVPLDSKDSEGRTALHMAAAN 235
           MG  E    Q   + E VDALLEAARYDDIDD+ SLASSG+ LDSKDS GRTALHMAAAN
Sbjct: 1   MGTAENQSEQLEATSESVDALLEAARYDDIDDIKSLASSGISLDSKDSFGRTALHMAAAN 60

Query: 234 GHLNVVEFLIQNGVDLNAYNVEKNTALHWACLNGHIEVVKNLIMAGADLSILNSHERSPV 55
           GHL++VE+LI  GVDLNA N EKNTALHWACLNGHIEVVK LI+AGA LS+LN HER+PV
Sbjct: 61  GHLDIVEYLISQGVDLNASNEEKNTALHWACLNGHIEVVKKLILAGASLSLLNCHERTPV 120

Query: 54  DEAVSHGKMEVIDAINEA 1
           DEAV+  KM+VIDAIN A
Sbjct: 121 DEAVTREKMDVIDAINAA 138


>ref|XP_002313998.1| predicted protein [Populus trichocarpa] gi|222850406|gb|EEE87953.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  199 bits (506), Expect = 2e-49
 Identities = 98/123 (79%), Positives = 110/123 (89%)
 Frame = -2

Query: 369 EDVDALLEAARYDDIDDLTSLASSGVPLDSKDSEGRTALHMAAANGHLNVVEFLIQNGVD 190
           E VDALLEAARYDD +D+TSLASSGV LDSKDS+GRTALHMAAANGHL++VE+LI  GVD
Sbjct: 19  EIVDALLEAARYDDFEDITSLASSGVSLDSKDSQGRTALHMAAANGHLDIVEYLINQGVD 78

Query: 189 LNAYNVEKNTALHWACLNGHIEVVKNLIMAGADLSILNSHERSPVDEAVSHGKMEVIDAI 10
           LNA N EKNT LHWACLNGHIEVVK LI+AGA L ILNSHER+P+DEAV+ GK++VIDAI
Sbjct: 79  LNASNEEKNTPLHWACLNGHIEVVKKLILAGASLGILNSHERTPMDEAVTRGKLDVIDAI 138

Query: 9   NEA 1
           N A
Sbjct: 139 NAA 141


>ref|XP_003602050.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
           gi|357520347|ref|XP_003630462.1| Ankyrin repeat
           domain-containing protein [Medicago truncatula]
           gi|355491098|gb|AES72301.1| Ankyrin repeat
           domain-containing protein [Medicago truncatula]
           gi|355524484|gb|AET04938.1| Ankyrin repeat
           domain-containing protein [Medicago truncatula]
          Length = 154

 Score =  197 bits (500), Expect = 1e-48
 Identities = 94/138 (68%), Positives = 120/138 (86%), Gaps = 3/138 (2%)
 Frame = -2

Query: 405 VEEGSPVQPPSG---EDVDALLEAARYDDIDDLTSLASSGVPLDSKDSEGRTALHMAAAN 235
           VE+   +Q P+    E+++ALLEAARYDD+DD+ SL S+GVPL+SKD +GRTALHMAAAN
Sbjct: 4   VEDNINLQDPTETMTENIEALLEAARYDDMDDVVSLTSNGVPLNSKDDQGRTALHMAAAN 63

Query: 234 GHLNVVEFLIQNGVDLNAYNVEKNTALHWACLNGHIEVVKNLIMAGADLSILNSHERSPV 55
           GH+N+VE+LI  G DLN+ NVEKNT LHWACLNGH+EVVK LI+AGA++S+LNS+ER+P+
Sbjct: 64  GHVNIVEYLISKGADLNSENVEKNTPLHWACLNGHVEVVKKLIIAGANVSVLNSYERTPM 123

Query: 54  DEAVSHGKMEVIDAINEA 1
           DEAV+ GK+EV+DAINEA
Sbjct: 124 DEAVTRGKLEVMDAINEA 141


>gb|ABK93753.1| unknown [Populus trichocarpa]
          Length = 153

 Score =  196 bits (499), Expect = 1e-48
 Identities = 97/123 (78%), Positives = 109/123 (88%)
 Frame = -2

Query: 369 EDVDALLEAARYDDIDDLTSLASSGVPLDSKDSEGRTALHMAAANGHLNVVEFLIQNGVD 190
           E VDALLEAARYDD +D+TSLASSGV LDSKDS+GRTALHMAAANGHL++VE+LI  GVD
Sbjct: 19  EIVDALLEAARYDDFEDITSLASSGVSLDSKDSQGRTALHMAAANGHLDIVEYLINQGVD 78

Query: 189 LNAYNVEKNTALHWACLNGHIEVVKNLIMAGADLSILNSHERSPVDEAVSHGKMEVIDAI 10
           LNA N EKNT LHWACLNGHIEVVK LI+AGA L ILNSHER+P+DEAV+ GK++VI AI
Sbjct: 79  LNASNEEKNTPLHWACLNGHIEVVKKLILAGASLGILNSHERTPMDEAVTRGKLDVIGAI 138

Query: 9   NEA 1
           N A
Sbjct: 139 NAA 141


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