BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006858
         (1820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, put...   371   e-100
ref|XP_004134826.1| PREDICTED: heterogeneous nuclear ribonucleop...   361   4e-97
ref|XP_004158841.1| PREDICTED: heterogeneous nuclear ribonucleop...   359   1e-96
ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory pr...   357   6e-96
emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]   355   2e-95

>ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus communis]
            gi|223539109|gb|EEF40705.1| heterogeneous nuclear
            ribonucleoprotein, putative [Ricinus communis]
          Length = 264

 Score =  371 bits (952), Expect = e-100
 Identities = 189/258 (73%), Positives = 205/258 (79%), Gaps = 2/258 (0%)
 Frame = -2

Query: 1024 AMLGSGGFSDGYEVGSKRQRMIESHPYFAVTGGTSSYQPYSYGGGLNRA-FPVVRLRGLP 848
            AMLGSGG SDGYEVGSKR RM+ES+PYFAV+GG+S +QPY YGGG   A FPVVRLRGLP
Sbjct: 7    AMLGSGGVSDGYEVGSKRPRMMESNPYFAVSGGSSGFQPYGYGGGFQSAPFPVVRLRGLP 66

Query: 847  FNCTDIDIFKFFTGLDIVDVLLTNKNGRFTGEAFVVFPSSVQSEFALQRDHQSMGRRYVE 668
            FNCTDIDIFKFF GLDIVDVLL NKNGRFTGEAFVVF  ++Q EFALQRD Q+MGRRYVE
Sbjct: 67   FNCTDIDIFKFFAGLDIVDVLLVNKNGRFTGEAFVVFAGAMQVEFALQRDRQNMGRRYVE 126

Query: 667  VFRCNKQDYYRAVAAEVKYEGIYD-EYXXXXXXXXXXXSVDKDQLEYTEFLKLRGLPYSV 491
            VFRC +QDYY AVAAEV YEGIYD +Y             DKDQLEYTE LK+RGLP+S 
Sbjct: 127  VFRCKRQDYYNAVAAEVNYEGIYDTDYHGSPPPSKAKRFSDKDQLEYTEILKMRGLPFSA 186

Query: 490  TKSDIVEFFDEFELAEDSVHIACRLDGKATGEAYVEFGSVXXXXXXXXXXXMTIGSRYVE 311
             K +I+EFF EFEL ED +HIACR DGKATGEAYVEF S            MTIGSRYVE
Sbjct: 187  KKPEIIEFFKEFELVEDRIHIACRPDGKATGEAYVEFASADEAKRAMSKDKMTIGSRYVE 246

Query: 310  LFTSTPDEARRAKSRSRQ 257
            LF STPDEARRA+SRSRQ
Sbjct: 247  LFPSTPDEARRAESRSRQ 264


>ref|XP_004134826.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
            sativus]
          Length = 263

 Score =  361 bits (926), Expect = 4e-97
 Identities = 186/257 (72%), Positives = 201/257 (78%), Gaps = 1/257 (0%)
 Frame = -2

Query: 1024 AMLGSGGFSDGYEVGSKRQRMIESHPYFAVTGGTSSYQPYSYGG-GLNRAFPVVRLRGLP 848
            AMLGSGG SDGYEVGSKRQRM+E +PYFAV+  T+ +QPY YG      AFPVVRLRGLP
Sbjct: 7    AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 66

Query: 847  FNCTDIDIFKFFTGLDIVDVLLTNKNGRFTGEAFVVFPSSVQSEFALQRDHQSMGRRYVE 668
            FNCTDIDIFKFF GLDIVDVLL NKNGRF GEAFVVF  SVQ EFALQRD Q+MGRRYVE
Sbjct: 67   FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 126

Query: 667  VFRCNKQDYYRAVAAEVKYEGIYDEYXXXXXXXXXXXSVDKDQLEYTEFLKLRGLPYSVT 488
            VFRC +QDYY AVAAEV YEGIYD               DKDQ+EYTE LKLRGLP+SVT
Sbjct: 127  VFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVT 186

Query: 487  KSDIVEFFDEFELAEDSVHIACRLDGKATGEAYVEFGSVXXXXXXXXXXXMTIGSRYVEL 308
            KS+I+EFF EF+LAED +HIA R DGKATGEAYVEF S            MTIGSRYVEL
Sbjct: 187  KSNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVEL 246

Query: 307  FTSTPDEARRAKSRSRQ 257
            F STP+EARRA+SRSRQ
Sbjct: 247  FPSTPNEARRAESRSRQ 263


>ref|XP_004158841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
            sativus]
          Length = 256

 Score =  359 bits (922), Expect = 1e-96
 Identities = 185/256 (72%), Positives = 200/256 (78%), Gaps = 1/256 (0%)
 Frame = -2

Query: 1021 MLGSGGFSDGYEVGSKRQRMIESHPYFAVTGGTSSYQPYSYGG-GLNRAFPVVRLRGLPF 845
            MLGSGG SDGYEVGSKRQRM+E +PYFAV+  T+ +QPY YG      AFPVVRLRGLPF
Sbjct: 1    MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPF 60

Query: 844  NCTDIDIFKFFTGLDIVDVLLTNKNGRFTGEAFVVFPSSVQSEFALQRDHQSMGRRYVEV 665
            NCTDIDIFKFF GLDIVDVLL NKNGRF GEAFVVF  SVQ EFALQRD Q+MGRRYVEV
Sbjct: 61   NCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEV 120

Query: 664  FRCNKQDYYRAVAAEVKYEGIYDEYXXXXXXXXXXXSVDKDQLEYTEFLKLRGLPYSVTK 485
            FRC +QDYY AVAAEV YEGIYD               DKDQ+EYTE LKLRGLP+SVTK
Sbjct: 121  FRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTK 180

Query: 484  SDIVEFFDEFELAEDSVHIACRLDGKATGEAYVEFGSVXXXXXXXXXXXMTIGSRYVELF 305
            S+I+EFF EF+LAED +HIA R DGKATGEAYVEF S            MTIGSRYVELF
Sbjct: 181  SNIIEFFGEFDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRYVELF 240

Query: 304  TSTPDEARRAKSRSRQ 257
             STP+EARRA+SRSRQ
Sbjct: 241  PSTPNEARRAESRSRQ 256


>ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory protein 2-like [Vitis
            vinifera]
          Length = 264

 Score =  357 bits (916), Expect = 6e-96
 Identities = 181/258 (70%), Positives = 203/258 (78%), Gaps = 2/258 (0%)
 Frame = -2

Query: 1024 AMLGSGGFSDGYEVGSKRQRMIESHPYFAVTGGTSSYQPYSYGGGLNR-AFPVVRLRGLP 848
            AMLGSGG SDGYE+GSKRQRM+ES+PYFAV+   S +QPY YG G     FPVVRLRGLP
Sbjct: 7    AMLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPTFPVVRLRGLP 66

Query: 847  FNCTDIDIFKFFTGLDIVDVLLTNKNGRFTGEAFVVFPSSVQSEFALQRDHQSMGRRYVE 668
            FNCTDIDIFKFF GLDIVDVLL NK+GRF+GEA+VVF  S+Q++FALQRD Q+MGRRYVE
Sbjct: 67   FNCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVE 126

Query: 667  VFRCNKQDYYRAVAAEVKYEGIYD-EYXXXXXXXXXXXSVDKDQLEYTEFLKLRGLPYSV 491
            VFRC KQDYY AVA+EV YEGIYD ++             DKDQ+E+TE LKLRGLP+SV
Sbjct: 127  VFRCKKQDYYHAVASEVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPFSV 186

Query: 490  TKSDIVEFFDEFELAEDSVHIACRLDGKATGEAYVEFGSVXXXXXXXXXXXMTIGSRYVE 311
             KS I+EFF +FEL +D VHIACR DGKATGEAYVEF S            MTIGSRYVE
Sbjct: 187  KKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYVE 246

Query: 310  LFTSTPDEARRAKSRSRQ 257
            LF STPDEARRA+SRSRQ
Sbjct: 247  LFPSTPDEARRAESRSRQ 264


>emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
          Length = 257

 Score =  355 bits (912), Expect = 2e-95
 Identities = 180/257 (70%), Positives = 202/257 (78%), Gaps = 2/257 (0%)
 Frame = -2

Query: 1021 MLGSGGFSDGYEVGSKRQRMIESHPYFAVTGGTSSYQPYSYGGGLNR-AFPVVRLRGLPF 845
            MLGSGG SDGYE+GSKRQRM+ES+PYFAV+   S +QPY YG G     FPVVRLRGLPF
Sbjct: 1    MLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPTFPVVRLRGLPF 60

Query: 844  NCTDIDIFKFFTGLDIVDVLLTNKNGRFTGEAFVVFPSSVQSEFALQRDHQSMGRRYVEV 665
            NCTDIDIFKFF GLDIVDVLL NK+GRF+GEA+VVF  S+Q++FALQRD Q+MGRRYVEV
Sbjct: 61   NCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVEV 120

Query: 664  FRCNKQDYYRAVAAEVKYEGIYD-EYXXXXXXXXXXXSVDKDQLEYTEFLKLRGLPYSVT 488
            FRC KQDYY AVA+EV YEGIYD ++             DKDQ+E+TE LKLRGLP+SV 
Sbjct: 121  FRCKKQDYYHAVASEVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPFSVK 180

Query: 487  KSDIVEFFDEFELAEDSVHIACRLDGKATGEAYVEFGSVXXXXXXXXXXXMTIGSRYVEL 308
            KS I+EFF +FEL +D VHIACR DGKATGEAYVEF S            MTIGSRYVEL
Sbjct: 181  KSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYVEL 240

Query: 307  FTSTPDEARRAKSRSRQ 257
            F STPDEARRA+SRSRQ
Sbjct: 241  FPSTPDEARRAESRSRQ 257