BLASTX nr result

ID: Coptis21_contig00006833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006833
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    77   6e-15
ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [M...    77   5e-12
ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800...    73   7e-11
ref|XP_003545621.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    71   2e-10
ref|XP_003537016.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    71   2e-10

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 76.6 bits (187), Expect(2) = 6e-15
 Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 27/125 (21%)
 Frame = -3

Query: 721 VFSSCDELIKWTRDVGRTIGNIIVIKKSDFGILGELSS-IFFSCERSGSE---------- 575
           +  S + LI+W R+ G+  G +I+I+++D G        I F CERSG+           
Sbjct: 12  IHPSREALIEWVRETGKRNGMVIIIQRADIGATNRSRPRITFVCERSGAYRHTGXDKGEE 71

Query: 574 ----------------CPFLLRGIKMPKDDQWMVKVECGHHNHPLRRQLQGSFVSGRLSS 443
                           CPF LRGIK+P  D+W + V+CG HNHP  + ++G   +GRLS 
Sbjct: 72  GKKKRKRKATGTKKCGCPFSLRGIKLPLADEWTLVVKCGTHNHPGGQHVEGHSFAGRLSM 131

Query: 442 EQKNI 428
           E+  I
Sbjct: 132 EEIGI 136



 Score = 30.0 bits (66), Expect(2) = 6e-15
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -1

Query: 426 VIELSRAGIIVKKILKVLNERDASTESTIPTIFNTQAKLK 307
           +I+LS++ +  K+IL  L ERD    +TI  I+N + K K
Sbjct: 137 LIDLSKSQMKPKEILNTLKERDGLNCTTIKGIYNARHKHK 176


>ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [Medicago truncatula]
           gi|355493993|gb|AES75196.1| Galactose-1-phosphate
           uridylyltransferase [Medicago truncatula]
          Length = 679

 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 21/133 (15%)
 Frame = -3

Query: 721 VFSSCDELIKWTRDVGRTIGNIIVIKKSDFGIL----GELSSIFFSCERSGSE------- 575
           VF + + L+ W R +GR  G  ++I++SD G L    G  +++   CERSG         
Sbjct: 509 VFPTREYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGCERSGKYRQYKDAL 568

Query: 574 ----------CPFLLRGIKMPKDDQWMVKVECGHHNHPLRRQLQGSFVSGRLSSEQKNIC 425
                     CPF LRG  +   D W V V CG HNH +     GS  +GRLS E+K++ 
Sbjct: 569 ARKTGTKKCGCPFRLRGRPVRNGDGWKVNVVCGFHNHEVIETAIGSTYAGRLSGEEKSLV 628

Query: 424 DRTVKGWNHSEKD 386
           D   +  N+  KD
Sbjct: 629 DDLTRS-NYKPKD 640


>ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800409 [Glycine max]
          Length = 877

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 27/131 (20%)
 Frame = -3

Query: 721 VFSSCDELIKWTRDVGRTIGNIIVIKKSDFGILGELSS--------IFFSCERSGS---- 578
           VF S + ++ W RDV +  G +++I +S+       S+        +   C+RSG     
Sbjct: 35  VFPSREAMLNWARDVAKENGFVLIILRSETSTTCTRSTRCNQRKTFVIMGCDRSGKYRGP 94

Query: 577 ---------------ECPFLLRGIKMPKDDQWMVKVECGHHNHPLRRQLQGSFVSGRLSS 443
                          ECPF L+G  + K + W+VKV CG HNH L   L G   +GRLS+
Sbjct: 95  YKNELSRKVSGTRKCECPFKLKGKALKKAEGWIVKVMCGCHNHDLEETLVGHPYAGRLSA 154

Query: 442 EQKNICDRTVK 410
           E+K++ D   K
Sbjct: 155 EEKSLVDALTK 165


>ref|XP_003545621.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 388

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 20/124 (16%)
 Frame = -3

Query: 721 VFSSCDELIKWTRDVGRTIGNIIVIKKSDF--GILGELSSIFFSCERSGSE--------- 575
           VF++ ++++KW R V    G + VI +SD   G  G  S +   CERSG           
Sbjct: 21  VFATREDVLKWARTVAHENGFVAVIMRSDTYTGSRGRTSFVLIGCERSGKYNGRKKEFVR 80

Query: 574 ---------CPFLLRGIKMPKDDQWMVKVECGHHNHPLRRQLQGSFVSGRLSSEQKNICD 422
                    CPF +RG  +   + W VK+ CG HNH L + L G   +GRL+ ++KNI  
Sbjct: 81  RDTGTRKCGCPFKIRGKPVHGGEGWAVKLICGIHNHELAKTLVGHPYAGRLTDDEKNIIA 140

Query: 421 RTVK 410
              K
Sbjct: 141 NMTK 144


>ref|XP_003537016.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 426

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 20/118 (16%)
 Frame = -3

Query: 721 VFSSCDELIKWTRDVGRTIGNIIVIKKSDF--GILGELSSIFFSCERSGSE--------- 575
           VF++ +++++W R V    G + +I +SD   G  G  S +   CERSG           
Sbjct: 33  VFATREDVLQWARTVAHENGFVAIIMRSDTYTGSRGRTSFVLIGCERSGKYKCRKKEFVR 92

Query: 574 ---------CPFLLRGIKMPKDDQWMVKVECGHHNHPLRRQLQGSFVSGRLSSEQKNI 428
                    CPF +RG  +   + WMVK+ CG HNH L + L G   +GRL+ ++KNI
Sbjct: 93  RDTGTRKCGCPFKIRGKPVHGGEGWMVKLICGIHNHELAKTLVGHPYAGRLTEDEKNI 150


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