BLASTX nr result

ID: Coptis21_contig00006827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006827
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271213.1| PREDICTED: TBC1 domain family member 13 [Vit...   620   e-175
ref|XP_002518065.1| conserved hypothetical protein [Ricinus comm...   616   e-174
ref|XP_004138936.1| PREDICTED: TBC1 domain family member 13-like...   599   e-169
ref|XP_002300164.1| predicted protein [Populus trichocarpa] gi|2...   596   e-168
ref|XP_003601640.1| TBC1 domain family member [Medicago truncatu...   588   e-165

>ref|XP_002271213.1| PREDICTED: TBC1 domain family member 13 [Vitis vinifera]
            gi|298205157|emb|CBI17216.3| unnamed protein product
            [Vitis vinifera]
          Length = 437

 Score =  620 bits (1600), Expect = e-175
 Identities = 303/349 (86%), Positives = 329/349 (94%)
 Frame = +3

Query: 3    LAELSRKVINLLELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWVAELARKRSQYKH 182
            LAELS+KVIN+ ELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHW +ELA+KRSQYKH
Sbjct: 90   LAELSKKVINVRELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWSSELAKKRSQYKH 149

Query: 183  FADELLVNPSEITRKLETSTRLETDESKLEDKGLLPRSEIPQGEHPLSLGKTSIWNQFFQ 362
            F +ELL+NPSEITR+L  ST  + DE K E  G+L RSEI  GEHPLSLGKTSIWNQFFQ
Sbjct: 150  FKEELLMNPSEITRRLGKSTSPD-DEPKSEGSGMLSRSEITHGEHPLSLGKTSIWNQFFQ 208

Query: 363  DTEIIEQIDRDVKRTHPDLHFFSGDSSFAKSNQEALRRILIIFAKLNPGIRYVQGMNEVL 542
            DTEIIEQIDRDVKRTHPD++FFSGD+  AK+NQ+ALR ILI+FAKLNPGIRYVQGMNE+L
Sbjct: 209  DTEIIEQIDRDVKRTHPDMNFFSGDTPSAKTNQDALRNILIVFAKLNPGIRYVQGMNEIL 268

Query: 543  APLFYVFRNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTITKMSQLL 722
            APLFYVF+NDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTIT++SQLL
Sbjct: 269  APLFYVFKNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTITRLSQLL 328

Query: 723  KEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLR 902
            KEHD ELWRHLE+TTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLR
Sbjct: 329  KEHDGELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLR 388

Query: 903  VCCAMLVLIRRRLLAGDFTSNLKLLQHYPSTNISHLLYVADKLRARSVG 1049
            +CCAML+L+RRRLLAGDFTSNLKLLQ+YPSTNISHLLYVA+KLRA+S G
Sbjct: 389  ICCAMLILVRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAQSTG 437


>ref|XP_002518065.1| conserved hypothetical protein [Ricinus communis]
            gi|223542661|gb|EEF44198.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 468

 Score =  616 bits (1589), Expect = e-174
 Identities = 299/346 (86%), Positives = 323/346 (93%)
 Frame = +3

Query: 3    LAELSRKVINLLELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWVAELARKRSQYKH 182
            L ELSRKV+N+ ELRR+ASQGIPDGAGIRSTVWKLLLGYLPTDR  W +ELA+KRSQY+H
Sbjct: 120  LTELSRKVVNIKELRRIASQGIPDGAGIRSTVWKLLLGYLPTDRSLWSSELAKKRSQYRH 179

Query: 183  FADELLVNPSEITRKLETSTRLETDESKLEDKGLLPRSEIPQGEHPLSLGKTSIWNQFFQ 362
            F +ELL+NPSEI R+LE ST  E DE K E++G+L RSEI  GEHPLSLGKTSIWNQFFQ
Sbjct: 180  FKEELLMNPSEIARRLEKSTGCENDEPKCENRGVLSRSEITHGEHPLSLGKTSIWNQFFQ 239

Query: 363  DTEIIEQIDRDVKRTHPDLHFFSGDSSFAKSNQEALRRILIIFAKLNPGIRYVQGMNEVL 542
            DTEIIEQIDRDVKRTHPD+HFF GDSSFAKSNQ+ALR ILI+FAKLNPGIRYVQGMNE+L
Sbjct: 240  DTEIIEQIDRDVKRTHPDMHFFCGDSSFAKSNQDALRNILIVFAKLNPGIRYVQGMNEIL 299

Query: 543  APLFYVFRNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTITKMSQLL 722
            APLFYVFRNDPDEE AA AEADTFFCFVELLSGFRD+FCQQLDNSVVGIRSTIT++SQLL
Sbjct: 300  APLFYVFRNDPDEEMAACAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTITRLSQLL 359

Query: 723  KEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLR 902
            KEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLR
Sbjct: 360  KEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLR 419

Query: 903  VCCAMLVLIRRRLLAGDFTSNLKLLQHYPSTNISHLLYVADKLRAR 1040
            +CC ML+LIRRRLLAGDFTSNLKLLQ+YP TNISHLLYVA+KLR +
Sbjct: 420  ICCTMLILIRRRLLAGDFTSNLKLLQNYPPTNISHLLYVANKLRVQ 465


>ref|XP_004138936.1| PREDICTED: TBC1 domain family member 13-like [Cucumis sativus]
            gi|449505611|ref|XP_004162521.1| PREDICTED: TBC1 domain
            family member 13-like [Cucumis sativus]
          Length = 446

 Score =  599 bits (1545), Expect = e-169
 Identities = 291/344 (84%), Positives = 319/344 (92%)
 Frame = +3

Query: 3    LAELSRKVINLLELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWVAELARKRSQYKH 182
            L ELS+K+INL ELR++ASQGIPDG GIRSTVWKLLLGYLP DRG W +ELA+KRSQYKH
Sbjct: 101  LVELSKKIINLRELRKIASQGIPDGPGIRSTVWKLLLGYLPPDRGLWTSELAKKRSQYKH 160

Query: 183  FADELLVNPSEITRKLETSTRLETDESKLEDKGLLPRSEIPQGEHPLSLGKTSIWNQFFQ 362
            F DELL+NPSEI+R+ E +   E DE+   +KG L RSEI Q EHPLSLGKTSIWNQ+FQ
Sbjct: 161  FKDELLMNPSEISRRSEKAKSYEHDET---NKGPLSRSEISQEEHPLSLGKTSIWNQYFQ 217

Query: 363  DTEIIEQIDRDVKRTHPDLHFFSGDSSFAKSNQEALRRILIIFAKLNPGIRYVQGMNEVL 542
            D+EIIEQIDRDVKRTHPD+HFFSGDSS AKSNQEALR ILI+FAKLNPGIRYVQGMNE+L
Sbjct: 218  DSEIIEQIDRDVKRTHPDMHFFSGDSSLAKSNQEALRNILIVFAKLNPGIRYVQGMNEIL 277

Query: 543  APLFYVFRNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTITKMSQLL 722
            APLFYVFR+DPDE+NAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIR+TITK+SQLL
Sbjct: 278  APLFYVFRSDPDEDNAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRATITKLSQLL 337

Query: 723  KEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLR 902
            KEHDEELWRHLE+TTKVNPQFYAFRWITLLLTQEFNFADSLHIWDT+LSDPEGP ETLLR
Sbjct: 338  KEHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTILSDPEGPLETLLR 397

Query: 903  VCCAMLVLIRRRLLAGDFTSNLKLLQHYPSTNISHLLYVADKLR 1034
            +CC+ML+LIRRRLLAGDFT+NLKLLQHYP  NISHLLYVA+KLR
Sbjct: 398  ICCSMLILIRRRLLAGDFTANLKLLQHYPPANISHLLYVANKLR 441


>ref|XP_002300164.1| predicted protein [Populus trichocarpa] gi|222847422|gb|EEE84969.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  596 bits (1537), Expect = e-168
 Identities = 290/344 (84%), Positives = 316/344 (91%)
 Frame = +3

Query: 3    LAELSRKVINLLELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWVAELARKRSQYKH 182
            L ELS+KVIN+ ELRR+ASQGIPDGAGIRSTVWKLLLGYL  DR  W +ELA+KRSQYKH
Sbjct: 13   LTELSKKVINMGELRRIASQGIPDGAGIRSTVWKLLLGYLAPDRSLWSSELAKKRSQYKH 72

Query: 183  FADELLVNPSEITRKLETSTRLETDESKLEDKGLLPRSEIPQGEHPLSLGKTSIWNQFFQ 362
            F ++LL+NPSEI R+LE +T L  D  K E + +L RSEI  GEHPLSLGK+S+WNQFFQ
Sbjct: 73   FKEDLLMNPSEIARRLEKTTVLNNDNGKSESRCVLSRSEITHGEHPLSLGKSSVWNQFFQ 132

Query: 363  DTEIIEQIDRDVKRTHPDLHFFSGDSSFAKSNQEALRRILIIFAKLNPGIRYVQGMNEVL 542
            D+EIIEQIDRDVKRTHPDLHFFSGDSS AKSNQEALR IL +FAKLNPGIRYVQGMNE+L
Sbjct: 133  DSEIIEQIDRDVKRTHPDLHFFSGDSSLAKSNQEALRNILTVFAKLNPGIRYVQGMNEIL 192

Query: 543  APLFYVFRNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTITKMSQLL 722
            APLFY+F+NDPDEE AA AEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTIT++SQLL
Sbjct: 193  APLFYIFKNDPDEEMAACAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTITRLSQLL 252

Query: 723  KEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLR 902
            KEHDEELWRHLE+TTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLR
Sbjct: 253  KEHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLR 312

Query: 903  VCCAMLVLIRRRLLAGDFTSNLKLLQHYPSTNISHLLYVADKLR 1034
            VCCAML+LIRRRLLAGDFTS LKLLQ+YP TNISH+LYVA+KLR
Sbjct: 313  VCCAMLILIRRRLLAGDFTSILKLLQNYPPTNISHMLYVANKLR 356


>ref|XP_003601640.1| TBC1 domain family member [Medicago truncatula]
            gi|355490688|gb|AES71891.1| TBC1 domain family member
            [Medicago truncatula]
          Length = 432

 Score =  588 bits (1516), Expect = e-165
 Identities = 282/348 (81%), Positives = 318/348 (91%)
 Frame = +3

Query: 3    LAELSRKVINLLELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWVAELARKRSQYKH 182
            LAELSRKVI++ ELR++ASQGIPD  G+RST+WKLLLGYLP DR  W +ELA+KRSQYK 
Sbjct: 85   LAELSRKVIDMRELRKIASQGIPDSPGLRSTIWKLLLGYLPPDRSLWSSELAKKRSQYKR 144

Query: 183  FADELLVNPSEITRKLETSTRLETDESKLEDKGLLPRSEIPQGEHPLSLGKTSIWNQFFQ 362
            F  ++L+NPSEITR++  S   + D+ K E +G+L RS+I  GEHPLSLGKTSIWNQFFQ
Sbjct: 145  FKQDILINPSEITRRMFNSASYDADDVKCETRGMLSRSQITHGEHPLSLGKTSIWNQFFQ 204

Query: 363  DTEIIEQIDRDVKRTHPDLHFFSGDSSFAKSNQEALRRILIIFAKLNPGIRYVQGMNEVL 542
            DT+IIEQIDRDVKRTHPD+HFF GDS  AKSNQEAL+ ILIIFAKLNPGIRYVQGMNEVL
Sbjct: 205  DTDIIEQIDRDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVL 264

Query: 543  APLFYVFRNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTITKMSQLL 722
            APLFYVF+NDPDEENAA +EADTFFCFVELLSGFRD+FCQQLDNS+VGIRSTIT++SQLL
Sbjct: 265  APLFYVFKNDPDEENAAFSEADTFFCFVELLSGFRDNFCQQLDNSIVGIRSTITRLSQLL 324

Query: 723  KEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLR 902
            KEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEF+FADSL IWDTL+SDP+GPQETLLR
Sbjct: 325  KEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFDFADSLRIWDTLVSDPDGPQETLLR 384

Query: 903  VCCAMLVLIRRRLLAGDFTSNLKLLQHYPSTNISHLLYVADKLRARSV 1046
            VCCAML+L+RRRLLAGDFTSNLKLLQ YPSTNISHLL+VA+KLR +S+
Sbjct: 385  VCCAMLILVRRRLLAGDFTSNLKLLQSYPSTNISHLLHVANKLRVQSI 432


Top