BLASTX nr result
ID: Coptis21_contig00006795
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00006795
(1885 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi... 715 0.0
ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|1... 695 0.0
ref|XP_002527905.1| pentatricopeptide repeat-containing protein,... 694 0.0
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi... 669 0.0
emb|CBI23460.3| unnamed protein product [Vitis vinifera] 641 0.0
>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 715 bits (1846), Expect = 0.0
Identities = 353/489 (72%), Positives = 408/489 (83%)
Frame = -3
Query: 1826 MAAVHFGRTKNIANRSKKYLEEALHKRLFREGSSDKAIRTELNQFLDSNKRVYKWEVGMS 1647
MA RTKNIA RSKKYLEEAL+ RLF++GSS+ ++R +LN FL S+KRV+KWEVG +
Sbjct: 1 MAMPQLSRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDT 60
Query: 1646 VKKLRQRKRFAPALKLAESMAKRGMNMTVSDQAIHLDIIAKTRGIPAAESFFVGLPEASK 1467
VKKLR RKRF PALKL+E+MAKRGMNMT+SDQAI+LD+I KTRG+ AAE++F+ LPE SK
Sbjct: 61 VKKLRDRKRFYPALKLSETMAKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSK 120
Query: 1466 NHLCYGALLNCYCKELMTXXXXXXXXXXXXLRFDSTSMAYNSLMTLYTKAGQPENVPAII 1287
NHL YGALLNCYCKEL+T L+ +SM YNSLMTLYTK GQPE +P II
Sbjct: 121 NHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTII 180
Query: 1286 QEMKASNVMPDSYTYNVWMRALAAVSDISGVERVIEEMKRDGRVAGDWTTYSNLASIYVG 1107
QE+K+ ++MPDSYTYN+WMRALAAV+DISGVERVIEEMKRDGRVA DWTTYSNLASIYV
Sbjct: 181 QELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVD 240
Query: 1106 AGMFEKAERALKELENRNACRDLSAYQYLVTLYGRTGNLLEVHRVWRSLRLAFPKMANLS 927
AG+FEKAE+ALKELE RNACRDL+A+Q+L+TLYGR GNLLEV+RVWRSLRLAFPK AN+S
Sbjct: 241 AGVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVS 300
Query: 926 YLNMIQVLVNLKDVPGAEKCFREWESVRSTYDIRIANALIGAYAREGLLEKAETLKERAR 747
YLNMIQVLVNLKD+PGAEKCFREWES S YDIR+ANALIGAYA++GLLEKAE LKE AR
Sbjct: 301 YLNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHAR 360
Query: 746 RSGAKPNVKTWEIFMDYHLKKGNTSLAVDCVTNAISIGRGDGRKWVPPQNVVQTLMSHFE 567
R GAKPN KTWEIF+ YHLK AVDCV NAIS GRGDG+KWVP ++ M HFE
Sbjct: 361 RRGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFE 420
Query: 566 QARDVEGAESFLETLKKVEDVFGADVFESLIRTYAAAGKTSPSLRRRLKMENVDVSEATK 387
Q +DV+GAE FLE LK + G +VFESLIR YAAAG+TSP +RRRLKMENV+VS++ K
Sbjct: 421 QEKDVDGAEGFLEILKSTVEDLGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCK 480
Query: 386 KLLEVVCVD 360
KLLE V V+
Sbjct: 481 KLLEEVSVE 489
>ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|118487894|gb|ABK95769.1|
unknown [Populus trichocarpa] gi|222873242|gb|EEF10373.1|
predicted protein [Populus trichocarpa]
Length = 490
Score = 695 bits (1794), Expect = 0.0
Identities = 341/484 (70%), Positives = 404/484 (83%)
Frame = -3
Query: 1811 FGRTKNIANRSKKYLEEALHKRLFREGSSDKAIRTELNQFLDSNKRVYKWEVGMSVKKLR 1632
+GRTK++ RSKKYLEEAL+ RLF+EGSS+ ++R +LNQFL S+KRV+KWEVG ++KKLR
Sbjct: 7 YGRTKSVTKRSKKYLEEALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGDTIKKLR 66
Query: 1631 QRKRFAPALKLAESMAKRGMNMTVSDQAIHLDIIAKTRGIPAAESFFVGLPEASKNHLCY 1452
R + PA+KL+E+M+ RGMN TVSDQAIHLD++AKTRGIPAAE++F+ LPE SKN Y
Sbjct: 67 SRNLYYPAVKLSETMSSRGMNKTVSDQAIHLDLVAKTRGIPAAENYFIDLPETSKNLRTY 126
Query: 1451 GALLNCYCKELMTXXXXXXXXXXXXLRFDSTSMAYNSLMTLYTKAGQPENVPAIIQEMKA 1272
GALLNCYCKELMT L +SM+YNSLMTLYTK GQPE +PAIIQEMKA
Sbjct: 127 GALLNCYCKELMTEEAEALIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAIIQEMKA 186
Query: 1271 SNVMPDSYTYNVWMRALAAVSDISGVERVIEEMKRDGRVAGDWTTYSNLASIYVGAGMFE 1092
NVMPDSYTYNVWMRALAAV+DISGVERVIEEMKRDGRVA +WTTYSNLASIYV AG F+
Sbjct: 187 DNVMPDSYTYNVWMRALAAVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYVDAGYFD 246
Query: 1091 KAERALKELENRNACRDLSAYQYLVTLYGRTGNLLEVHRVWRSLRLAFPKMANLSYLNMI 912
KAE+ALKELE NA +DL A+Q+L+TLYGRTG L+EV+R+WRSLRLAFPK AN+SYLNMI
Sbjct: 247 KAEKALKELEKINANKDLFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANISYLNMI 306
Query: 911 QVLVNLKDVPGAEKCFREWESVRSTYDIRIANALIGAYAREGLLEKAETLKERARRSGAK 732
QVLVNLKDVPGAEKCFREWES STYDIR+AN +I AYA+EGL++KAE LKERARR GAK
Sbjct: 307 QVLVNLKDVPGAEKCFREWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERARRRGAK 366
Query: 731 PNVKTWEIFMDYHLKKGNTSLAVDCVTNAISIGRGDGRKWVPPQNVVQTLMSHFEQARDV 552
PN KTWEIF DY+LK G+ L VDC+ NA+S GRG+G+KWVP +V +LM+HFEQ +DV
Sbjct: 367 PNSKTWEIFCDYYLKNGDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHFEQQKDV 426
Query: 551 EGAESFLETLKKVEDVFGADVFESLIRTYAAAGKTSPSLRRRLKMENVDVSEATKKLLEV 372
+GAE +E LKK D +VFESLIRTYAAAG+ S +RRRLKMENV+VS+ +KLLE
Sbjct: 427 DGAEDLIEILKKAVDDVAVEVFESLIRTYAAAGRKSQLMRRRLKMENVEVSDDCQKLLEA 486
Query: 371 VCVD 360
+CV+
Sbjct: 487 ICVE 490
>ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532680|gb|EEF34462.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 490
Score = 694 bits (1791), Expect = 0.0
Identities = 344/484 (71%), Positives = 402/484 (83%)
Frame = -3
Query: 1811 FGRTKNIANRSKKYLEEALHKRLFREGSSDKAIRTELNQFLDSNKRVYKWEVGMSVKKLR 1632
FGRTKN+A RSKKYLEEAL+ RLF+EGSS+ +R +LNQFL S+KRVYKWEVG ++KKLR
Sbjct: 7 FGRTKNVAKRSKKYLEEALYFRLFKEGSSEVKVREQLNQFLKSSKRVYKWEVGDTLKKLR 66
Query: 1631 QRKRFAPALKLAESMAKRGMNMTVSDQAIHLDIIAKTRGIPAAESFFVGLPEASKNHLCY 1452
R + PALKL+E+M+KRGMN TVSDQAIHLD++AKTRGIPAAE FF+ LPE SKNHL Y
Sbjct: 67 SRGLYYPALKLSEAMSKRGMNKTVSDQAIHLDLVAKTRGIPAAEIFFIDLPETSKNHLTY 126
Query: 1451 GALLNCYCKELMTXXXXXXXXXXXXLRFDSTSMAYNSLMTLYTKAGQPENVPAIIQEMKA 1272
GALLNCYC +LMT L +SM+YNSLMTLYTK GQPE +P IIQEMK+
Sbjct: 127 GALLNCYCNQLMTEEAEALMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGIIQEMKS 186
Query: 1271 SNVMPDSYTYNVWMRALAAVSDISGVERVIEEMKRDGRVAGDWTTYSNLASIYVGAGMFE 1092
++MPDSYTYNVWMRALAAV+DISG ERVIEEMKRDGRVA DWTTYSNLASIYV A +FE
Sbjct: 187 DSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYVDAQLFE 246
Query: 1091 KAERALKELENRNACRDLSAYQYLVTLYGRTGNLLEVHRVWRSLRLAFPKMANLSYLNMI 912
KAE+ LKELE RN RD SA+Q+L+TLYGR GNL E++R+WRSLRLAFPK +N+SYLNMI
Sbjct: 247 KAEKTLKELEKRNVHRDHSAFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNISYLNMI 306
Query: 911 QVLVNLKDVPGAEKCFREWESVRSTYDIRIANALIGAYAREGLLEKAETLKERARRSGAK 732
QVLVNLKD+PGAEKCFREWES S YDIR+AN LI AYA++GLLEKAE LKERA GAK
Sbjct: 307 QVLVNLKDLPGAEKCFREWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERAIGRGAK 366
Query: 731 PNVKTWEIFMDYHLKKGNTSLAVDCVTNAISIGRGDGRKWVPPQNVVQTLMSHFEQARDV 552
PN KTWEIF DY+ + G+ L+V+C+ NAIS GRGDG+KW+P VV + M+HFEQ +DV
Sbjct: 367 PNAKTWEIFSDYYFENGDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHFEQQKDV 426
Query: 551 EGAESFLETLKKVEDVFGADVFESLIRTYAAAGKTSPSLRRRLKMENVDVSEATKKLLEV 372
+GAE F+E LKK D A+VFESLIRTYAAAG+TS LRRRLKMENV+VSEA +KLLE+
Sbjct: 427 DGAEGFIEILKKATDDVEANVFESLIRTYAAAGRTSQVLRRRLKMENVEVSEAGQKLLEM 486
Query: 371 VCVD 360
+CV+
Sbjct: 487 ICVE 490
>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
[Glycine max]
Length = 490
Score = 669 bits (1725), Expect = 0.0
Identities = 334/484 (69%), Positives = 393/484 (81%)
Frame = -3
Query: 1811 FGRTKNIANRSKKYLEEALHKRLFREGSSDKAIRTELNQFLDSNKRVYKWEVGMSVKKLR 1632
+GR+K++ RSKKYLEEAL+ +LF++GSS +R LN F+ S KRVYKWEVG ++KKLR
Sbjct: 7 YGRSKSVVKRSKKYLEEALYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGDTLKKLR 66
Query: 1631 QRKRFAPALKLAESMAKRGMNMTVSDQAIHLDIIAKTRGIPAAESFFVGLPEASKNHLCY 1452
RK + PALKL+E+MAKR M TVSD AIHLD++AK RGI AAE++FV LPE SKNHLCY
Sbjct: 67 DRKLYQPALKLSETMAKRNMIKTVSDHAIHLDLLAKARGITAAENYFVSLPEPSKNHLCY 126
Query: 1451 GALLNCYCKELMTXXXXXXXXXXXXLRFDSTSMAYNSLMTLYTKAGQPENVPAIIQEMKA 1272
GALLNCYCKELMT L +SM YNSLMTLYTK GQPE +P++IQEMKA
Sbjct: 127 GALLNCYCKELMTEKSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSLIQEMKA 186
Query: 1271 SNVMPDSYTYNVWMRALAAVSDISGVERVIEEMKRDGRVAGDWTTYSNLASIYVGAGMFE 1092
SNVM DSYTYNVWMRALAAV+DISGVERV +EMKR G+V GDWTTYSNLASI+V AG+F+
Sbjct: 187 SNVMLDSYTYNVWMRALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFVDAGLFD 246
Query: 1091 KAERALKELENRNACRDLSAYQYLVTLYGRTGNLLEVHRVWRSLRLAFPKMANLSYLNMI 912
KAE ALKELE RNA +DL+AYQ+L+TLYGRTGNL EV+RVWRSLRLAFPK AN+SYLNMI
Sbjct: 247 KAEVALKELEKRNAFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANISYLNMI 306
Query: 911 QVLVNLKDVPGAEKCFREWESVRSTYDIRIANALIGAYAREGLLEKAETLKERARRSGAK 732
QVLVNLKD+PGAEKCFREWE TYDIR+AN LI AY + +LEKAE LKERARR GAK
Sbjct: 307 QVLVNLKDLPGAEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERARRRGAK 366
Query: 731 PNVKTWEIFMDYHLKKGNTSLAVDCVTNAISIGRGDGRKWVPPQNVVQTLMSHFEQARDV 552
PN KT EIFMDY+L KG+ LAVD + AIS+GRG+G KWVP ++ +M HFEQ +DV
Sbjct: 367 PNAKTLEIFMDYYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHFEQEKDV 426
Query: 551 EGAESFLETLKKVEDVFGADVFESLIRTYAAAGKTSPSLRRRLKMENVDVSEATKKLLEV 372
+GAE FLE LKK + G +VFESLIRTYAAAG+ S +++RRLKMENV+VSE T+KLLE
Sbjct: 427 DGAEEFLEILKKSVESPGVEVFESLIRTYAAAGRISSAMQRRLKMENVEVSEGTQKLLEA 486
Query: 371 VCVD 360
+ V+
Sbjct: 487 ISVE 490
>emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 641 bits (1654), Expect = 0.0
Identities = 329/489 (67%), Positives = 378/489 (77%)
Frame = -3
Query: 1826 MAAVHFGRTKNIANRSKKYLEEALHKRLFREGSSDKAIRTELNQFLDSNKRVYKWEVGMS 1647
MA RTKNIA RSKKYLEEAL+ RLF++GSS+ ++R +LN FL S+KRV+KWEVG +
Sbjct: 1 MAMPQLSRTKNIAKRSKKYLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDT 60
Query: 1646 VKKLRQRKRFAPALKLAESMAKRGMNMTVSDQAIHLDIIAKTRGIPAAESFFVGLPEASK 1467
VKKLR RKRF PALKL+E+MAKRGMNMT+SDQAI+LD+I KTRG+ AAE++F+ LPE SK
Sbjct: 61 VKKLRDRKRFYPALKLSETMAKRGMNMTISDQAIYLDLITKTRGVAAAENYFIDLPETSK 120
Query: 1466 NHLCYGALLNCYCKELMTXXXXXXXXXXXXLRFDSTSMAYNSLMTLYTKAGQPENVPAII 1287
NHL YGALLNCYCKEL+T L+ +SM YNSLMTLYTK GQPE +P II
Sbjct: 121 NHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTII 180
Query: 1286 QEMKASNVMPDSYTYNVWMRALAAVSDISGVERVIEEMKRDGRVAGDWTTYSNLASIYVG 1107
QE+K+ ++MPDSYTYN+WMRALAAV+DISGVERVIEEMKRDGRVA DWTTYSNLASIYV
Sbjct: 181 QELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVD 240
Query: 1106 AGMFEKAERALKELENRNACRDLSAYQYLVTLYGRTGNLLEVHRVWRSLRLAFPKMANLS 927
AG+FEKAE+ALKELE RNACRDL+A+Q+L+TLYGR GNLLEV+RVWRSLRLAFPK AN+S
Sbjct: 241 AGVFEKAEKALKELEKRNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVS 300
Query: 926 YLNMIQVLVNLKDVPGAEKCFREWESVRSTYDIRIANALIGAYAREGLLEKAETLKERAR 747
YLNMIQVLVNLKD+PGAEKCFREWES S YDIR+ANALIGAYA++GLLEKAE LKE AR
Sbjct: 301 YLNMIQVLVNLKDLPGAEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHAR 360
Query: 746 RSGAKPNVKTWEIFMDYHLKKGNTSLAVDCVTNAISIGRGDGRKWVPPQNVVQTLMSHFE 567
R GAKPN KTWEIF+ YHLK AVDCV NAIS
Sbjct: 361 RRGAKPNAKTWEIFLAYHLKNREMKQAVDCVANAIST----------------------- 397
Query: 566 QARDVEGAESFLETLKKVEDVFGADVFESLIRTYAAAGKTSPSLRRRLKMENVDVSEATK 387
G +VFESLIR YAAAG+TSP +RRRLKMENV+VS++ K
Sbjct: 398 ----------------------GVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCK 435
Query: 386 KLLEVVCVD 360
KLLE V V+
Sbjct: 436 KLLEEVSVE 444