BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006787
         (1578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   162   2e-37
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   157   6e-36
ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein...   156   1e-35
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   156   1e-35
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...   151   5e-34

>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  162 bits (411), Expect = 2e-37
 Identities = 99/239 (41%), Positives = 140/239 (58%), Gaps = 4/239 (1%)
 Frame = +3

Query: 261 TRNWLDLPKDVMLAIFMKLTAYEILYTAQSVCSSWRKLGKEPQLFRSIAIRHLWGCFRSN 440
           +RNWL+LP DV   I  KL   EIL  AQ VCSSWRK+ ++P ++R I +R+    +  +
Sbjct: 14  SRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMD 73

Query: 441 NGALRFTKEVVDRSCRQLTDFSYDGDNSEMILLYVAHRTNMLKYLQINCCRFISDGALIK 620
                  ++ V RSC QL  F+ +   ++ +LLY+    N L  L++  C  ISD  L++
Sbjct: 74  YNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNRISDEGLVE 133

Query: 621 AAGSFPLLEELVLIKYSFSRETIKKVGRCCPKLKCLTL--AFNEKESCDV-AFAIAESMP 791
           A    PLLE+L L   SF  ET++ +G+ CP LK L L   F  +  CD  A AIAE+MP
Sbjct: 134 AVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVECDKGALAIAENMP 193

Query: 792 QLRRLSLPDNYLANDGLEAILEGCLYLEYLDLRYS-RWIVDPKVLNKCVDRIRDVWLPN 965
            LR L +  N L N GLEAIL+GC  LE LDLR+     +  ++  KC ++I+D+ LP+
Sbjct: 194 NLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKCSEKIKDLRLPH 252


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  157 bits (398), Expect = 6e-36
 Identities = 99/252 (39%), Positives = 142/252 (56%), Gaps = 8/252 (3%)
 Frame = +3

Query: 231 MKRKRQVTCGTRNWLDLPKDVMLAIFMKLTAYEILYTAQSVCSSWRKLGKEPQLFRSIAI 410
           M   ++     RNWLDLP+DV+  IF KL A EIL  AQ VCS WR + KEP L+R+I +
Sbjct: 1   MSSSKEAAAEERNWLDLPRDVLCTIFQKLGATEILTRAQGVCSVWRAISKEPLLWRTIDM 60

Query: 411 RHLWGCFRSNNGALRFTKEVVDRSCRQLTDFSYDGDNSEMILLYVAHRTNMLKYLQINCC 590
           R+L G    +   L      +D S   L   + +   ++ +L ++ H T+ L+ L++ CC
Sbjct: 61  RNL-GDIGLDFHLLAMCHRAIDYSSGHLLHINVEYFGTDDLLHHITHSTSNLRSLRLACC 119

Query: 591 RFISDGALIKAAGSFPLLEELVLIKYSFSRETIKKVGRCCPKLKCLTLAFNEK------- 749
             ISD  L + A   P LEEL +   + +++ ++ +G+CCP LK  TL FN +       
Sbjct: 120 YQISDEGLCEIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLK--TLKFNMEGYRRPHI 177

Query: 750 ESCDVAFAIAESMPQLRRLSLPDNYLANDGLEAILEGCLYLEYLDLRYSRWIVDPKVLNK 929
           E  + AFAIAE+MP L  L L  N L N+GL AIL+GC  LE LDLR    +     L K
Sbjct: 178 ECDEEAFAIAETMPGLHHLQLFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLGK 237

Query: 930 -CVDRIRDVWLP 962
            C ++I+++ LP
Sbjct: 238 RCAEQIKELRLP 249


>ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus] gi|449490717|ref|XP_004158686.1| PREDICTED:
           putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 318

 Score =  156 bits (395), Expect = 1e-35
 Identities = 103/240 (42%), Positives = 137/240 (57%), Gaps = 7/240 (2%)
 Frame = +3

Query: 267 NWLDLPKDVMLAIFMKLTAYEILYTAQSVCSSWRKLGKEPQLFRSIAIRHLWGCFRSNNG 446
           NWL+LP +VM  I  K+ A EI    Q VCSSWRKL  +P ++R+I +R + G F   N 
Sbjct: 5   NWLELPSEVMSMILQKVGAIEIFQNVQYVCSSWRKLCMDPLMWRTIDMR-ISGNFPRRNY 63

Query: 447 ALRFT-KEVVDRSCRQLTDFSYDGDNSEMILLYVAHRTNMLKYLQINCCRFISDGALIKA 623
            LR   +  VD S   L D S +   ++ +LLY+A R+N LK L I  C  ISD  LIKA
Sbjct: 64  YLRAACRYGVDLSRGHLIDISIESFATDSLLLYIARRSNELKRLWIADCFCISDMGLIKA 123

Query: 624 AGSFPLLEELVLIKYSFSRETIKKVGRCCPKLKCLTL----AFNEKESCD-VAFAIAESM 788
           A   PLLE+L +    F   T+  VGRCCP LK L L       +   CD  A AIA++M
Sbjct: 124 ASKLPLLEQLEIFLCCFDSRTLGTVGRCCPLLKSLKLNQQFCTGKGMECDREALAIAKTM 183

Query: 789 PQLRRLSLPDNYLANDGLEAILEGCLYLEYLDLRYS-RWIVDPKVLNKCVDRIRDVWLPN 965
           P+LR L +  N L + GL+AIL GC  LE LDLR+      + ++ N C + I+ + LP+
Sbjct: 184 PKLRHLQIFGNALTDKGLQAILNGCPDLESLDLRHCFNLKFEGELGNMCAENIKILHLPH 243


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  156 bits (395), Expect = 1e-35
 Identities = 103/243 (42%), Positives = 140/243 (57%), Gaps = 10/243 (4%)
 Frame = +3

Query: 264 RNWLDLPKDVMLAIFMKLTAYEILYTAQSVCSSWRKLGKEPQLFRSIAIRHLWGCFRSNN 443
           RNWLDLP+DV+  IF KL A EIL  AQ VCS WR + KEP L+R+I +R+  G   +N 
Sbjct: 18  RNWLDLPRDVVCTIFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMRNS-GDIETNF 76

Query: 444 GALRFTKEVVDRSCRQLTDFSYDGDNSEMILLYVAHRTNMLKYLQINCCRFISDGALIKA 623
             L      +D S   L   + +   ++ +L ++ H T+ L+ L++ CC  ISD  L + 
Sbjct: 77  VFLAMCHRAIDYSSGHLLHINIEYFATDDLLRHITHSTSNLRSLRLACCYQISDEGLCEI 136

Query: 624 AGSFPLLEELVLIKYSF--SRETIKKVGRCCPKLKCLTLAFNEK-------ESCDVAFAI 776
           A   P LEEL +   SF  +R+ ++ VGRCC  LK  TL FN K       E  + AFAI
Sbjct: 137 AKELPQLEELDISISSFNPTRDPLEAVGRCCRHLK--TLKFNMKGYRRPHIECDEEAFAI 194

Query: 777 AESMPQLRRLSLPDNYLANDGLEAILEGCLYLEYLDLRYSRWIVDPKVLNK-CVDRIRDV 953
           AE+MP L  L L  N L N+GL AIL+GC +LE LDLR    +     L K C ++I+++
Sbjct: 195 AETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQIKEL 254

Query: 954 WLP 962
            LP
Sbjct: 255 RLP 257


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score =  151 bits (381), Expect = 5e-34
 Identities = 85/221 (38%), Positives = 130/221 (58%), Gaps = 7/221 (3%)
 Frame = +3

Query: 249 VTCGTRNWLDLPKDVMLAIFMKLTAYEILYTAQSVCSSWRKLGKEPQLFRSIAIRHLWGC 428
           +  G RNWLDLP DV+L IF KL   ++L+ A +VC++WRK+ K+P L+ +I + ++   
Sbjct: 18  IDSGERNWLDLPSDVVLTIFRKLHTIDLLHRAHNVCTTWRKISKDPFLYHTIDMPNIGTD 77

Query: 429 FRSNNGALRFTKEVVDRSCRQLTDFSYDGDNSEMILLYVAHRTNMLKYLQINCCRFISDG 608
             S+       +  VD S  Q TD + +   ++ +L ++A   N L+ L++  C  ++D 
Sbjct: 78  LSSDFYLEILCQRAVDYSSGQATDINIEYFGTDDLLRHIADSANHLQRLRLLGCYNVTDE 137

Query: 609 ALIKAAGSFPLLEELVLIKYSFSRETIKKVGRCCPKLKCLTLAFN-------EKESCDVA 767
            L + AG    LEEL +  +S S + ++ +GRCCP+LK  T  FN         E  D A
Sbjct: 138 GLCEVAGKLSHLEELDITIHSLSNDPLEAIGRCCPQLK--TFKFNIEGFRRPRMEFDDEA 195

Query: 768 FAIAESMPQLRRLSLPDNYLANDGLEAILEGCLYLEYLDLR 890
           F+IA++MP LR L L  N ++ DGL AIL+GC +LE LD+R
Sbjct: 196 FSIAKTMPGLRHLMLVGNKMSKDGLRAILDGCPHLESLDIR 236