BLASTX nr result

ID: Coptis21_contig00006680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006680
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36913.1| unknown [Medicago truncatula]                          192   2e-47
emb|CBI30106.3| unnamed protein product [Vitis vinifera]              187   6e-46
ref|XP_002273990.1| PREDICTED: two-component response regulator ...   187   6e-46
ref|XP_002304794.1| type-a response regulator [Populus trichocar...   185   4e-45
emb|CBI40157.3| unnamed protein product [Vitis vinifera]              184   5e-45

>gb|AFK36913.1| unknown [Medicago truncatula]
          Length = 239

 Score =  192 bits (488), Expect = 2e-47
 Identities = 99/142 (69%), Positives = 113/142 (79%)
 Frame = +1

Query: 49  MGMATETQYHVLAVDDNFIDRKLVERLFKISSFHVTTVDSGSKALEFLGLVDNDHVNKSS 228
           MGMA E+Q+HVLAVDD+ IDRKL+ERL K SS+ VTTVDSGSKALEFLGL +ND  N ++
Sbjct: 1   MGMAAESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNT 60

Query: 229 CPPSVPSALHQEMEVNLVITDYCMPGMTGYDXXXXXXXXXXXXDIPVVIMSSENVPSRIS 408
             PSV    HQE+EVNLVITDYCMPGMTGYD            +IPVVIMSSENVPSRI+
Sbjct: 61  --PSVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRIN 118

Query: 409 RCLEEGAEEFLLKPVQLADVKR 474
           RCLEEGAEEF LKPV+L+D+ R
Sbjct: 119 RCLEEGAEEFFLKPVRLSDLNR 140


>emb|CBI30106.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score =  187 bits (476), Expect = 6e-46
 Identities = 97/142 (68%), Positives = 111/142 (78%)
 Frame = +1

Query: 49  MGMATETQYHVLAVDDNFIDRKLVERLFKISSFHVTTVDSGSKALEFLGLVDNDHVNKSS 228
           MGM+TE+Q+HVLAVDD+ IDRKL+E+L K SS+ VTTVDSGSKALEFLGL +ND    S 
Sbjct: 1   MGMSTESQFHVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSV 60

Query: 229 CPPSVPSALHQEMEVNLVITDYCMPGMTGYDXXXXXXXXXXXXDIPVVIMSSENVPSRIS 408
            P S     HQE+EVNL+ITDYCMPGMTGYD            +IPVVIMSSENVPSRI+
Sbjct: 61  SPNS-----HQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRIT 115

Query: 409 RCLEEGAEEFLLKPVQLADVKR 474
           RCLEEGAEEF LKPVQ++DV R
Sbjct: 116 RCLEEGAEEFFLKPVQISDVNR 137


>ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
          Length = 218

 Score =  187 bits (476), Expect = 6e-46
 Identities = 97/142 (68%), Positives = 111/142 (78%)
 Frame = +1

Query: 49  MGMATETQYHVLAVDDNFIDRKLVERLFKISSFHVTTVDSGSKALEFLGLVDNDHVNKSS 228
           MGM+TE+Q+HVLAVDD+ IDRKL+E+L K SS+ VTTVDSGSKALEFLGL +ND    S 
Sbjct: 1   MGMSTESQFHVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSV 60

Query: 229 CPPSVPSALHQEMEVNLVITDYCMPGMTGYDXXXXXXXXXXXXDIPVVIMSSENVPSRIS 408
            P S     HQE+EVNL+ITDYCMPGMTGYD            +IPVVIMSSENVPSRI+
Sbjct: 61  SPNS-----HQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRIT 115

Query: 409 RCLEEGAEEFLLKPVQLADVKR 474
           RCLEEGAEEF LKPVQ++DV R
Sbjct: 116 RCLEEGAEEFFLKPVQISDVNR 137


>ref|XP_002304794.1| type-a response regulator [Populus trichocarpa]
           gi|224075848|ref|XP_002304795.1| hypothetical protein
           POPTRDRAFT_693167 [Populus trichocarpa]
           gi|222842226|gb|EEE79773.1| type-a response regulator
           [Populus trichocarpa] gi|222842227|gb|EEE79774.1|
           hypothetical protein POPTRDRAFT_693167 [Populus
           trichocarpa]
          Length = 193

 Score =  185 bits (469), Expect = 4e-45
 Identities = 93/144 (64%), Positives = 108/144 (75%)
 Frame = +1

Query: 43  TIMGMATETQYHVLAVDDNFIDRKLVERLFKISSFHVTTVDSGSKALEFLGLVDNDHVNK 222
           T+  +ATETQ+HVLAVDD+ IDRKL+ERL K SS+ VT VDSGSKALEFLGL  +D    
Sbjct: 3   TLATLATETQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQRD 62

Query: 223 SSCPPSVPSALHQEMEVNLVITDYCMPGMTGYDXXXXXXXXXXXXDIPVVIMSSENVPSR 402
           S+     P   HQ +E+N++ITDYCMPGMTGYD            DIPVVIMSSENVPSR
Sbjct: 63  SNPSSVSPDHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSR 122

Query: 403 ISRCLEEGAEEFLLKPVQLADVKR 474
           I+RCLEEGAEEF LKPVQL+DV +
Sbjct: 123 INRCLEEGAEEFFLKPVQLSDVNK 146


>emb|CBI40157.3| unnamed protein product [Vitis vinifera]
          Length = 170

 Score =  184 bits (468), Expect = 5e-45
 Identities = 98/143 (68%), Positives = 112/143 (78%), Gaps = 1/143 (0%)
 Frame = +1

Query: 49  MGMATETQYHVLAVDDNFIDRKLVERLFKISSFHVTTVDSGSKALEFLGLVDNDHVNKSS 228
           MGMATE Q+HVLAVDD+ IDRKL+E+L K SS+ VT VDSGSKALEFLGL + +  N S 
Sbjct: 1   MGMATEAQFHVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQEAEQRNLS- 59

Query: 229 CPPSV-PSALHQEMEVNLVITDYCMPGMTGYDXXXXXXXXXXXXDIPVVIMSSENVPSRI 405
            PPS+ PS   QEMEVNL+ITDYCMPGMTGYD            DIPVVIMSSEN+PSRI
Sbjct: 60  -PPSLCPS---QEMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRI 115

Query: 406 SRCLEEGAEEFLLKPVQLADVKR 474
           +RCLEEGAE+F LKPVQL+DV +
Sbjct: 116 NRCLEEGAEDFFLKPVQLSDVNK 138


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