BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006679
         (1969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514929.1| GTP binding protein, putative [Ricinus commu...   614   e-173
ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPa...   603   e-170
ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPa...   601   e-169
ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPa...   588   e-165
emb|CBI27627.3| unnamed protein product [Vitis vinifera]              582   e-163

>ref|XP_002514929.1| GTP binding protein, putative [Ricinus communis]
            gi|223545980|gb|EEF47483.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 500

 Score =  614 bits (1583), Expect = e-173
 Identities = 301/409 (73%), Positives = 357/409 (87%), Gaps = 10/409 (2%)
 Frame = -3

Query: 1583 NQAIGMVSSAQANYMRVVVEKAAPTENT-------SSSIVGVELLCVVRAVLKKIKRRVL 1425
            +QA+G V++AQAN+MRV+++   P+  T         S +GVELLCVVRAVLKKI+RRVL
Sbjct: 92   SQAVGTVAAAQANFMRVIIQSLPPSSGTFLKSPEEEDSRIGVELLCVVRAVLKKIRRRVL 151

Query: 1424 VGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPKVESFSLTRFL 1245
            VGDKV+V SIDWVD+RGMIENVF+RS+EILDPPVANVDHLLVLFS +QPK+E F+LTRFL
Sbjct: 152  VGDKVVVGSIDWVDRRGMIENVFQRSTEILDPPVANVDHLLVLFSMDQPKIEPFALTRFL 211

Query: 1244 VEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGLDSLAFILREQ 1065
            VEAESTGIP+TLALNKSELVDEET +AWK++LR WGY+PLFCSVES +GLDSLA+ILREQ
Sbjct: 212  VEAESTGIPLTLALNKSELVDEETLIAWKSRLRSWGYEPLFCSVESKLGLDSLAYILREQ 271

Query: 1064 TSVIVGPSGVGKSSLINALRGSKHG---PEEDNWLSHIEGSKWFEDQRVGEVSIRSGRGK 894
            T+VIVGPSGVGKSSLINALR         E DNW   + GSKWFE+QRVGEVS RSGRGK
Sbjct: 272  TTVIVGPSGVGKSSLINALRNKPRACDVAENDNWFDPMLGSKWFEEQRVGEVSTRSGRGK 331

Query: 893  HTTRHVSLLPLSGGGFLADTPGFNQPSLMRVTKKSLAQMFPEIRKMLSTSDPAKCSFSDC 714
            HTTR+VSLLPLS GG+LADTPGFNQPSL++VTK+SLA+ FPEI+KMLS+  PAKCSF+DC
Sbjct: 332  HTTRNVSLLPLSAGGYLADTPGFNQPSLLKVTKQSLAETFPEIQKMLSSGGPAKCSFNDC 391

Query: 713  LHLGEPGCVVKGDWERYAYYLQLLDEIKIREEFQLRTLGTKRESDVRYKVGDMGVKQAEP 534
            LHLGEPGC+V GDWERY++Y QLLDEI+IREEFQLRT GTK+E DVRYKVGDMGV+QAEP
Sbjct: 392  LHLGEPGCIVNGDWERYSFYFQLLDEIRIREEFQLRTYGTKKEGDVRYKVGDMGVQQAEP 451

Query: 533  RLELKKHRRQSRKRINQSVIEELNDLDDDEHFMDVEEEPFEAVRAIRHE 387
            RLE KKHRRQSRKRINQS+++EL++LDDD++ +D E +P   +RA+++E
Sbjct: 452  RLEPKKHRRQSRKRINQSLLDELDELDDDDNLLDEENDPI--LRALKNE 498


>ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Cucumis
            sativus] gi|449489232|ref|XP_004158254.1| PREDICTED:
            putative ribosome biogenesis GTPase RsgA-like [Cucumis
            sativus]
          Length = 504

 Score =  603 bits (1556), Expect = e-170
 Identities = 304/419 (72%), Positives = 355/419 (84%), Gaps = 20/419 (4%)
 Frame = -3

Query: 1583 NQAIGMVSSAQANYMRVVV---------------EKAAPTENTSS--SIVGVELLCVVRA 1455
            +QAIG V++AQAN+MRV+V               E++   E+ SS  S++GVELLCVV+A
Sbjct: 88   SQAIGTVAAAQANFMRVIVQTLPSQFSQSPNDDLERSGSLEDDSSKSSMLGVELLCVVKA 147

Query: 1454 VLKKIKRRVLVGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPK 1275
            VLKKIKRRVLVGDKV+V SIDWVD+RGMIENVF+RSSEILDPPVANVDHLLVLFS +QP+
Sbjct: 148  VLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSMDQPR 207

Query: 1274 VESFSLTRFLVEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGL 1095
            +E F+LTRFLVEAESTGIP+TL LNK ELVDEET V+WK++LR WGY PLFCSV++G GL
Sbjct: 208  LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETLVSWKSRLRSWGYDPLFCSVQTGAGL 267

Query: 1094 DSLAFILREQTSVIVGPSGVGKSSLINALRGSKHGPEE---DNWLSHIEGSKWFEDQRVG 924
            DSLAFILR+QT+VIVGPSGVGKSSLINALR S    +    DNW   I GSKWFE+QRV 
Sbjct: 268  DSLAFILRDQTTVIVGPSGVGKSSLINALRNSNRATDASDTDNWFDPILGSKWFEEQRVA 327

Query: 923  EVSIRSGRGKHTTRHVSLLPLSGGGFLADTPGFNQPSLMRVTKKSLAQMFPEIRKMLSTS 744
            EVS RSGRGKHTTRHVSLLPLSGGG+LADTPGFNQPSLM++TK+SLAQ FPEI+KML  S
Sbjct: 328  EVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKMLHAS 387

Query: 743  DPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIREEFQLRTLGTKRESDVRYKV 564
            +PAKCSF+DCLHLGEPGCV+KGDWERY YY QLLDEI+IREEFQLRT GTKRE DVR KV
Sbjct: 388  EPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKV 447

Query: 563  GDMGVKQAEPRLELKKHRRQSRKRINQSVIEELNDLDDDEHFMDVEEEPFEAVRAIRHE 387
            G+MGVKQAEPRLELKKHRRQSRKR+NQS+++EL++L+D++      EE    +RA+++E
Sbjct: 448  GEMGVKQAEPRLELKKHRRQSRKRVNQSILDELDELEDEDDL----EETNPILRAMKNE 502


>ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like isoform 3
            [Vitis vinifera]
          Length = 491

 Score =  601 bits (1549), Expect = e-169
 Identities = 320/479 (66%), Positives = 363/479 (75%), Gaps = 19/479 (3%)
 Frame = -3

Query: 1805 MSISLTSIFRYRLSLSLPILHLKKTSS---TIITSARQDPNPYRKLQXXXXXXXXXXXXX 1635
            M I+ TSIFRY    SL +L     +S       +  Q+P   +                
Sbjct: 1    MPIASTSIFRYSNPSSLLLLRRGAAASFRHLSFVAKHQNPISRKPQNKNLLRAKQTVKHL 60

Query: 1634 XXXXXXXXXXXXXXXXTNQAIGMVSSAQANYMRVVVEKAAPTENTSSSI---------VG 1482
                              +A+GMV++AQAN+MRV+VE +   +               VG
Sbjct: 61   SSLSPTLPVNHRPLLSATEAVGMVAAAQANFMRVIVEDSRVEDGDGGGDGDGDGDAVRVG 120

Query: 1481 VELLCVVRAVLKKIKRRVLVGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLL 1302
            VELLCVVRAVLKKIKRRVLVGDKVLV SIDWVD+RG+IENVF R SEILDPPVANVDHLL
Sbjct: 121  VELLCVVRAVLKKIKRRVLVGDKVLVGSIDWVDRRGVIENVFSRKSEILDPPVANVDHLL 180

Query: 1301 VLFSFEQPKVESFSLTRFLVEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLF 1122
            VLF+ EQPK+E +SLTRFLVEAESTGIP+TLALNKSELVDEET+VAWK++LR WGY P+F
Sbjct: 181  VLFAMEQPKLEVYSLTRFLVEAESTGIPITLALNKSELVDEETRVAWKSRLRSWGYGPVF 240

Query: 1121 CSVESGVGLDSLAFILREQTSVIVGPSGVGKSSLINALRGSKH-----GPEEDNWLSHIE 957
            CSVES  GLD+LAF LREQT+VIVGPSGVGKSSLINALR S H       EE+NW   I 
Sbjct: 241  CSVESKFGLDTLAFSLREQTTVIVGPSGVGKSSLINALR-SNHPLINVSSEENNWFDSIL 299

Query: 956  GSKWFEDQRVGEVSIRSGRGKHTTRHVSLLPLSGGGFLADTPGFNQPSLMRVTKKSLAQM 777
            GSK  E+QRVGEVS+RSGRGKHTTRHVSLLPLSGGG+LADTPGFNQPSL++VT +SLAQ 
Sbjct: 300  GSKLLEEQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLAQT 359

Query: 776  FPEIRKMLSTS--DPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIREEFQLRT 603
            FPEIRK+LS S  +P KCSF+DCLHLGEPGCVVKGDWERY YY QLLDEIKIREEFQLRT
Sbjct: 360  FPEIRKLLSGSANEPEKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIREEFQLRT 419

Query: 602  LGTKRESDVRYKVGDMGVKQAEPRLELKKHRRQSRKRINQSVIEELNDLDDDEHFMDVE 426
            LGTKRE DVRYK GDMGVKQAEPRLE KKHRRQSRKR+NQS+++EL+DLDDD+  +D E
Sbjct: 420  LGTKREGDVRYKTGDMGVKQAEPRLEPKKHRRQSRKRMNQSILDELDDLDDDDSLLDAE 478


>ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
            max]
          Length = 473

 Score =  588 bits (1516), Expect = e-165
 Identities = 296/400 (74%), Positives = 345/400 (86%), Gaps = 1/400 (0%)
 Frame = -3

Query: 1583 NQAIGMVSSAQANYMRVVVEKAAPTENTSSSIVGVELLCVVRAVLKKIKRRVLVGDKVLV 1404
            +QAIG+V+++QAN+MRV+V +    +  S S  GVE+LCVVRA+LKKIKRRV+VGDKVLV
Sbjct: 79   SQAIGVVAASQANFMRVIVPE---NDEPSGSFRGVEILCVVRALLKKIKRRVMVGDKVLV 135

Query: 1403 SSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPKVESFSLTRFLVEAESTG 1224
             SIDWVD+RGMIENVF R+SEILDPPVANVD LLVLFS EQPK E F+LTRFLVEAESTG
Sbjct: 136  GSIDWVDRRGMIENVFHRTSEILDPPVANVDQLLVLFSLEQPKPEPFTLTRFLVEAESTG 195

Query: 1223 IPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGLDSLAFILREQTSVIVGP 1044
            IP+TLALNK+ELVD E   +WKA+LR WGY+P+FCSVESG GLD L F LR+QT+VIVGP
Sbjct: 196  IPLTLALNKTELVDNEIISSWKARLRSWGYEPVFCSVESGHGLDLLGFKLRDQTTVIVGP 255

Query: 1043 SGVGKSSLINALRGS-KHGPEEDNWLSHIEGSKWFEDQRVGEVSIRSGRGKHTTRHVSLL 867
            SGVGKSSLINALR +  +  E +NW   + GSKW EDQRVGEVS RSGRGKHTTRHVSLL
Sbjct: 256  SGVGKSSLINALRSNPSNAAEGENWFEPVLGSKWLEDQRVGEVSTRSGRGKHTTRHVSLL 315

Query: 866  PLSGGGFLADTPGFNQPSLMRVTKKSLAQMFPEIRKMLSTSDPAKCSFSDCLHLGEPGCV 687
            PLS GGFLADTPGFNQPSL++VTK+SLAQ FPEIRKMLS S+  KCSF++CLHLGEPGC+
Sbjct: 316  PLSEGGFLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSASEIEKCSFNNCLHLGEPGCI 375

Query: 686  VKGDWERYAYYLQLLDEIKIREEFQLRTLGTKRESDVRYKVGDMGVKQAEPRLELKKHRR 507
            VKGDWERY+YY QLLDEI+IREEFQLRT GTKRE DVR K+GDMGV+QAEPRLE KKHRR
Sbjct: 376  VKGDWERYSYYFQLLDEIRIREEFQLRTFGTKREGDVRLKMGDMGVQQAEPRLEPKKHRR 435

Query: 506  QSRKRINQSVIEELNDLDDDEHFMDVEEEPFEAVRAIRHE 387
            QSRKRINQS+++EL+  DDD++ +D E +P   +RA+R+E
Sbjct: 436  QSRKRINQSILDELD--DDDDNLLDEENDPI--LRALRNE 471


>emb|CBI27627.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  582 bits (1500), Expect = e-163
 Identities = 293/361 (81%), Positives = 322/361 (89%), Gaps = 7/361 (1%)
 Frame = -3

Query: 1487 VGVELLCVVRAVLKKIKRRVLVGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDH 1308
            VGVELLCVVRAVLKKIKRRVLVGDKVLV SIDWVD+RG+IENVF R SEILDPPVANVDH
Sbjct: 28   VGVELLCVVRAVLKKIKRRVLVGDKVLVGSIDWVDRRGVIENVFSRKSEILDPPVANVDH 87

Query: 1307 LLVLFSFEQPKVESFSLTRFLVEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQP 1128
            LLVLF+ EQPK+E +SLTRFLVEAESTGIP+TLALNKSELVDEET+VAWK++LR WGY P
Sbjct: 88   LLVLFAMEQPKLEVYSLTRFLVEAESTGIPITLALNKSELVDEETRVAWKSRLRSWGYGP 147

Query: 1127 LFCSVESGVGLDSLAFILREQTSVIVGPSGVGKSSLINALRGSKH-----GPEEDNWLSH 963
            +FCSVES  GLD+LAF LREQT+VIVGPSGVGKSSLINALR S H       EE+NW   
Sbjct: 148  VFCSVESKFGLDTLAFSLREQTTVIVGPSGVGKSSLINALR-SNHPLINVSSEENNWFDS 206

Query: 962  IEGSKWFEDQRVGEVSIRSGRGKHTTRHVSLLPLSGGGFLADTPGFNQPSLMRVTKKSLA 783
            I GSK  E+QRVGEVS+RSGRGKHTTRHVSLLPLSGGG+LADTPGFNQPSL++VT +SLA
Sbjct: 207  ILGSKLLEEQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLA 266

Query: 782  QMFPEIRKMLSTS--DPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIREEFQL 609
            Q FPEIRK+LS S  +P KCSF+DCLHLGEPGCVVKGDWERY YY QLLDEIKIREEFQL
Sbjct: 267  QTFPEIRKLLSGSANEPEKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIREEFQL 326

Query: 608  RTLGTKRESDVRYKVGDMGVKQAEPRLELKKHRRQSRKRINQSVIEELNDLDDDEHFMDV 429
            RTLGTKRE DVRYK GDMGVKQAEPRLE KKHRRQSRKR+NQS+++EL+DLDDD+  +D 
Sbjct: 327  RTLGTKREGDVRYKTGDMGVKQAEPRLEPKKHRRQSRKRMNQSILDELDDLDDDDSLLDA 386

Query: 428  E 426
            E
Sbjct: 387  E 387