BLASTX nr result

ID: Coptis21_contig00006594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006594
         (1676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containin...   494   e-137
ref|XP_002515393.1| zinc finger protein, putative [Ricinus commu...   456   e-126
ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|2...   451   e-124
ref|XP_004138693.1| PREDICTED: zinc finger CCCH domain-containin...   445   e-122
ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containin...   444   e-122

>ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
            vinifera]
          Length = 496

 Score =  494 bits (1272), Expect = e-137
 Identities = 267/482 (55%), Positives = 320/482 (66%), Gaps = 2/482 (0%)
 Frame = +3

Query: 72   SLTAINEAIVLDPTNSELSAVHEELLLAIRDAEEGLLHLKRARLLKEADSIFSAQTSKST 251
            SL  + EA+V DPTNSEL +VHEEL+ AI+DAEEGL HLKRARLL+EADS  +    K T
Sbjct: 23   SLAVLKEALVSDPTNSELLSVHEELIWAIKDAEEGLFHLKRARLLREADS--ALHDHKYT 80

Query: 252  AEDVVAEPLDPENVEVEPLEE-GFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 428
            AEDV  EPLDP + E EPLEE  + VGSKCRFRYTDG WYNG I+GL+G  SA+++FL+P
Sbjct: 81   AEDVKVEPLDPSDAEAEPLEEQSYHVGSKCRFRYTDGRWYNGVILGLEGLDSAKISFLSP 140

Query: 429  TSENMLXXXXXXXXXXXXXXXXXXXXXXXXXXGIDVPLSSLKNYIPTLWKQISVGSNIWA 608
            TSENML                          G+DV LSSLK Y PT+W+Q  VGS+IWA
Sbjct: 141  TSENMLICKFFLQQRCRFGTNCRLSH------GVDVHLSSLKQYNPTIWEQSLVGSSIWA 194

Query: 609  ISDPNAGIWRKAELESWDDTLGLAQVVFQDDGSSRKVDGEGLSLSEYAQMSNXXXXXXXX 788
            +SD   GIW++AELESWD+ L + +VVF+DDGSS K+  E +SLSEYA+MS+        
Sbjct: 195  VSDAKYGIWKEAELESWDNELRVGKVVFRDDGSSEKLGTESISLSEYAEMSDGETDSSSE 254

Query: 789  XXXXXXXXXXXXXXGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMG 968
                          GLGF+E+ ALQRGIQT+TA+FAKWENHTRGIASKMMANMGYREGMG
Sbjct: 255  QSDSCDDEEEEGSQGLGFLESTALQRGIQTETAIFAKWENHTRGIASKMMANMGYREGMG 314

Query: 969  LGASGQGMVDPITVKVLKPKQSLDHAFDSHKSDGNXXXXXXXXXXXXXXXXXXXXXXXXX 1148
            LGASGQG+VDP++VKVL PKQSLDHA +SH+++ N                         
Sbjct: 315  LGASGQGIVDPLSVKVLPPKQSLDHALESHENEENKESRGKKRSRGGKRKRDKKFAAAAR 374

Query: 1149 XXXXXXXFNPDVFSFINNQLATQIVHQN-GSLNKRQSKDFGEAKNEDRKSLIAYDNEVRD 1325
                     PDVFS IN QLA      N GS  K+Q+K  GE K EDR++L+AYD+EVR+
Sbjct: 375  AKKDKEESRPDVFSLINTQLAMHGEALNGGSAKKQQNKSLGEGKKEDRRALVAYDDEVRE 434

Query: 1326 LRVQVEKLEEMVNRNRKEKVVYEAFSRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWL 1505
            LR++VEKLEEMVNRN+KEKVVYEA  RKL+ETRK                  +EKEKRWL
Sbjct: 435  LRIRVEKLEEMVNRNKKEKVVYEAAMRKLNETRKALAEAEAAHASASKAVVGREKEKRWL 494

Query: 1506 KF 1511
            KF
Sbjct: 495  KF 496


>ref|XP_002515393.1| zinc finger protein, putative [Ricinus communis]
            gi|223545337|gb|EEF46842.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 495

 Score =  456 bits (1173), Expect = e-126
 Identities = 250/481 (51%), Positives = 307/481 (63%), Gaps = 1/481 (0%)
 Frame = +3

Query: 72   SLTAINEAIVLDPTNSELSAVHEELLLAIRDAEEGLLHLKRARLLKEADSIFSAQTSKST 251
            SL A+N+A+  DP+N EL +V EEL+ AI+DAE+GLLHLKRARLL+E DS  +   SK T
Sbjct: 24   SLAALNDALASDPSNHELLSVQEELVQAIKDAEDGLLHLKRARLLREVDS--ALHDSKDT 81

Query: 252  AEDVVAEPLDPENVEVEPLEE-GFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 428
              DV  EPLD + V  EPLEE   SVGSKCRFR+ DG WYNG+II L+GS +A++ FLTP
Sbjct: 82   GNDVKIEPLDSDEVGAEPLEEHSHSVGSKCRFRHNDGRWYNGKIIELEGSTNAKIAFLTP 141

Query: 429  TSENMLXXXXXXXXXXXXXXXXXXXXXXXXXXGIDVPLSSLKNYIPTLWKQISVGSNIWA 608
            TSENML                          G+DVPLSSL+ YIPT+W Q  VGS+IWA
Sbjct: 142  TSENMLTCKFFLQQRCRFGTNCRLSH------GVDVPLSSLRTYIPTMWDQSMVGSSIWA 195

Query: 609  ISDPNAGIWRKAELESWDDTLGLAQVVFQDDGSSRKVDGEGLSLSEYAQMSNXXXXXXXX 788
            +SD NAGIWR+AELESWDD L + +VVF+DDGSS +++ + ++LSE+A  S+        
Sbjct: 196  VSDSNAGIWREAELESWDDKLRVGKVVFRDDGSSAELESDSMNLSEHALKSDEEESHSSS 255

Query: 789  XXXXXXXXXXXXXXGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMG 968
                          GLGF+E++ LQRGIQT+TA+FA+WENHTRGIASKMMANMGYR+GMG
Sbjct: 256  EQSDSSDYEEESAQGLGFLESSTLQRGIQTETAIFARWENHTRGIASKMMANMGYRDGMG 315

Query: 969  LGASGQGMVDPITVKVLKPKQSLDHAFDSHKSDGNXXXXXXXXXXXXXXXXXXXXXXXXX 1148
            LGASGQGMVDPI+VKVL PKQSLDHA  S K +                           
Sbjct: 316  LGASGQGMVDPISVKVLPPKQSLDHALQSQKEEEIRENHGKKRSRGGKRKREKKLAALAK 375

Query: 1149 XXXXXXXFNPDVFSFINNQLATQIVHQNGSLNKRQSKDFGEAKNEDRKSLIAYDNEVRDL 1328
                    NPDVFS IN QLA      NG    +Q  +   +K  DR+ LIAYD+E+++L
Sbjct: 376  EAKEEEEMNPDVFSLINIQLAKHNEALNGGSKTKQHHN-KVSKKVDRRVLIAYDDEMKEL 434

Query: 1329 RVQVEKLEEMVNRNRKEKVVYEAFSRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLK 1508
            R++ EKLEEM +RN+KEKVVYEA  RKL+ETRK                  KEKEK+WLK
Sbjct: 435  RLRAEKLEEMASRNKKEKVVYEAAMRKLNETRKALAEAEAAHASASNAVVSKEKEKKWLK 494

Query: 1509 F 1511
            F
Sbjct: 495  F 495


>ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|222865778|gb|EEF02909.1|
            predicted protein [Populus trichocarpa]
          Length = 495

 Score =  451 bits (1159), Expect = e-124
 Identities = 251/481 (52%), Positives = 301/481 (62%), Gaps = 1/481 (0%)
 Frame = +3

Query: 72   SLTAINEAIVLDPTNSELSAVHEELLLAIRDAEEGLLHLKRARLLKEADSIFSAQTSKST 251
            SL A+N+A+  DP+N EL +V EELL  I+D EEGLLHLKRARLL+EADS+  A  S  T
Sbjct: 24   SLAALNDALASDPSNPELLSVQEELLQVIKDVEEGLLHLKRARLLREADSVLHA--SYHT 81

Query: 252  AEDVVAEPLDPENVEVEPLEEG-FSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 428
             EDV AEPLDP +VE EPLE+  +SVGSKCRFR+ DG WYNGQII L  S +A++ FLTP
Sbjct: 82   VEDVKAEPLDPVHVEPEPLEDQCYSVGSKCRFRHVDGRWYNGQIIELVCSDTAKIAFLTP 141

Query: 429  TSENMLXXXXXXXXXXXXXXXXXXXXXXXXXXGIDVPLSSLKNYIPTLWKQISVGSNIWA 608
             SENML                          G+DV LSSLKNY+PT+W Q  VGS+IWA
Sbjct: 142  ISENMLICKFFLQERCRFGTSCRLSH------GVDVSLSSLKNYVPTMWDQSLVGSSIWA 195

Query: 609  ISDPNAGIWRKAELESWDDTLGLAQVVFQDDGSSRKVDGEGLSLSEYAQMSNXXXXXXXX 788
            +SD N GIWRKAELESWD+   + QVVF D GSS K+  E +++SEYA MS+        
Sbjct: 196  LSDSNVGIWRKAELESWDNEHRVGQVVFHDGGSSAKLGSEAMTISEYALMSDEEETDSSS 255

Query: 789  XXXXXXXXXXXXXXGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMG 968
                          GLGF+E+  LQRGIQT TA+FA WENHTRGIASKMMANMGYREGMG
Sbjct: 256  EGSDSSDYDEESAEGLGFLESTNLQRGIQTGTAIFATWENHTRGIASKMMANMGYREGMG 315

Query: 969  LGASGQGMVDPITVKVLKPKQSLDHAFDSHKSDGNXXXXXXXXXXXXXXXXXXXXXXXXX 1148
            LGASGQGM+DPI VKVL PKQSLDHA +S K +G                          
Sbjct: 316  LGASGQGMLDPIPVKVLPPKQSLDHALESQK-EGIKDNHGKKRSRGGKRKREKKFAAAAR 374

Query: 1149 XXXXXXXFNPDVFSFINNQLATQIVHQNGSLNKRQSKDFGEAKNEDRKSLIAYDNEVRDL 1328
                     PDVF+ INNQLA      N    K+Q     E K  +R+ L+AYD+E+++L
Sbjct: 375  AAKAEEETRPDVFTLINNQLAGHNEALNSESAKKQKSKGSEEKKVNRQDLLAYDDEIKEL 434

Query: 1329 RVQVEKLEEMVNRNRKEKVVYEAFSRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLK 1508
            R++VEKLE+M NRN+KEKVVYE+  RKL+ETR                   +EKEK+WLK
Sbjct: 435  RIRVEKLEDMANRNKKEKVVYESAMRKLNETRIALAKAEASKASASNAITGREKEKKWLK 494

Query: 1509 F 1511
            F
Sbjct: 495  F 495


>ref|XP_004138693.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
            [Cucumis sativus]
          Length = 497

 Score =  445 bits (1144), Expect = e-122
 Identities = 244/483 (50%), Positives = 311/483 (64%), Gaps = 3/483 (0%)
 Frame = +3

Query: 72   SLTAINEAIVLDPTNSELSAVHEELLLAIRDAEEGLLHLKRARLLKEADSIFSAQTSKST 251
            SL A+ +A+  DP+NSEL  VHEEL+ AI+DAEEGLLHLKR+RLL+EAD++     S + 
Sbjct: 23   SLAALQDALASDPSNSELLEVHEELVQAIKDAEEGLLHLKRSRLLREADTVLRGHDSNA- 81

Query: 252  AEDVVAEPLDPENVEVEPLEE-GFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 428
            AEDV  EPLD  +++ EPLE+  F VGSKCRFRYTDG WY+G+I+GLDGS SA+++FLTP
Sbjct: 82   AEDVKVEPLDATDIKPEPLEDHSFFVGSKCRFRYTDGRWYDGEIVGLDGSNSAKISFLTP 141

Query: 429  TSENMLXXXXXXXXXXXXXXXXXXXXXXXXXXGIDVPLSSLKNYIPTLWKQISVGSNIWA 608
            T+ENML                          G+D+PL+SL++Y+PT+W Q   GS+I A
Sbjct: 142  TTENMLMCKFFLQQRCRFGTNCRLSH------GVDIPLTSLRSYVPTIWNQSMAGSSILA 195

Query: 609  ISDPNAGIWRKAELESWDDTLGLAQVVFQDDGSSRKVDGEGLSLSEYAQMSNXXXXXXXX 788
            +S  N  IWR AELESWDD L +AQVVF+ DG S+K+  E ++LSEYA +++        
Sbjct: 196  LSSRN-DIWRHAELESWDDALQVAQVVFKGDGYSQKLGPEDIALSEYALINDEEESDSSL 254

Query: 789  XXXXXXXXXXXXXXGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMG 968
                          GLGF+E++  Q+GIQT+T +FAKWENHTRGIASKMMANMGYREGMG
Sbjct: 255  EQSDSSDYEEDDLQGLGFLESSTQQKGIQTETTIFAKWENHTRGIASKMMANMGYREGMG 314

Query: 969  LGASGQGMVDPITVKVLKPKQSLDHAFDSHKSDG-NXXXXXXXXXXXXXXXXXXXXXXXX 1145
            LGASGQGM++PI VKVL  KQSLDHA +S K +  N                        
Sbjct: 315  LGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTNDENNGKKRSRGGKRKREKKFAAAS 374

Query: 1146 XXXXXXXXFNPDVFSFINNQLATQIVHQN-GSLNKRQSKDFGEAKNEDRKSLIAYDNEVR 1322
                      PDVF+ IN+ LA      N GS+ K++ K   + K  DR+++IAYD+EV+
Sbjct: 375  RAAKEEEESRPDVFNLINHHLAMHNRALNDGSVKKQKDKGSADWKKVDRRTIIAYDDEVK 434

Query: 1323 DLRVQVEKLEEMVNRNRKEKVVYEAFSRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRW 1502
            DLR+++EKLEEMVNRN+KEKVVYEA  RKL+ETRK                  +EKEKRW
Sbjct: 435  DLRIRIEKLEEMVNRNKKEKVVYEAALRKLNETRKALAEAEAAHASASNAVNSREKEKRW 494

Query: 1503 LKF 1511
            LKF
Sbjct: 495  LKF 497


>ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
            [Glycine max]
          Length = 495

 Score =  444 bits (1142), Expect = e-122
 Identities = 250/483 (51%), Positives = 308/483 (63%), Gaps = 3/483 (0%)
 Frame = +3

Query: 72   SLTAINEAIVLDPTNSELSAVHEELLLAIRDAEEGLLHLKRARLLKEADSIFSAQTSKST 251
            SL+AI++A++ DPT+ EL AVHEEL+ AI+DAEEGLLHLKRARLL+EADS+    T+  T
Sbjct: 23   SLSAIDQALLSDPTDPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLH-NTNIFT 81

Query: 252  AEDVVAEPLDPENVEVEPLEEG-FSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 428
             E V  +PLDP  VE EPLE+  +SVGSKCRFR+ DG WYNGQ++ LD S  A+V+FLTP
Sbjct: 82   EEKV--DPLDPTYVEPEPLEDKCYSVGSKCRFRHKDGRWYNGQVVQLDNS-VAKVSFLTP 138

Query: 429  TSENMLXXXXXXXXXXXXXXXXXXXXXXXXXXGIDVPLSSLKNYIPTLWKQISVGSNIWA 608
            TSENML                          G+DV LS+LK Y+PT+WKQ  VGS+IWA
Sbjct: 139  TSENMLMCKFFLQQRCRFGSNCRLSH------GLDVQLSALKKYVPTIWKQSLVGSSIWA 192

Query: 609  ISDPNAGIWRKAELESWDDTLGLAQVVFQDDGSSRKVDGEGLSLSEYAQMSNXXXXXXXX 788
            +S  NAG WR+AEL+SWD+  G+ QVVF+DDGSS K+  E ++LSE+A+MS+        
Sbjct: 193  VSTANAGTWREAELKSWDEKAGVGQVVFRDDGSSVKLGAEEMALSEHAEMSDIESDSSLD 252

Query: 789  XXXXXXXXXXXXXXGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMG 968
                          G+GF+E+  LQRGIQT+TA FA WENHTRGIASKMMANMGYREGMG
Sbjct: 253  QSDSSDYEEEEESQGIGFLESTNLQRGIQTETATFATWENHTRGIASKMMANMGYREGMG 312

Query: 969  LGASGQGMVDPITVKVLKPKQSLDHAFDSHKSDGNXXXXXXXXXXXXXXXXXXXXXXXXX 1148
            LG +GQGM+DPI VKVL PKQSLDHA +SHK + N                         
Sbjct: 313  LGVTGQGMLDPIAVKVLPPKQSLDHALESHKREENKEKQGKKKQSRGGKRKREKKFAEAN 372

Query: 1149 XXXXXXXFN-PDVFSFINNQLAT-QIVHQNGSLNKRQSKDFGEAKNEDRKSLIAYDNEVR 1322
                    +  DVF+ INN LA        G + K+QSK   E K  DR++L+AY+ EV+
Sbjct: 373  RAAKEEEESASDVFALINNHLAMHNEAFGGGLMKKQQSKGSEEGKKVDRRALVAYEEEVK 432

Query: 1323 DLRVQVEKLEEMVNRNRKEKVVYEAFSRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRW 1502
            DL+++VEKLE +VN NRKEK VYE   RKL+ETRK                  KEKEKRW
Sbjct: 433  DLKIRVEKLEHIVNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRW 492

Query: 1503 LKF 1511
            LKF
Sbjct: 493  LKF 495


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