BLASTX nr result

ID: Coptis21_contig00006558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006558
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synth...    95   7e-18
ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
gb|ABK95302.1| unknown [Populus trichocarpa]                           92   6e-17
ref|XP_004167864.1| PREDICTED: proline--tRNA ligase-like, partia...    91   7e-17
ref|XP_004152099.1| PREDICTED: bifunctional glutamate/proline--t...    91   7e-17

>ref|XP_002281375.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase [Vitis vinifera]
           gi|297744088|emb|CBI37058.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/82 (56%), Positives = 57/82 (69%)
 Frame = -3

Query: 246 MDIPIGDLAEKVGDILENIQQSLFDAAKEKRDACIKVAKTWEEFTTALHEKKLILAPWCD 67
           +DIPI +L E+V D+L+NIQQ+LFD AK+KRDACIK  +TW+EF  AL +KK+ILAPWCD
Sbjct: 404 IDIPIVNLVEQVKDMLDNIQQNLFDVAKQKRDACIKTVRTWDEFIEALGQKKMILAPWCD 463

Query: 66  XXXXXXXXXXXXXXENGACKTL 1
                         E GA KTL
Sbjct: 464 EMEVEKDVKARTKGETGAAKTL 485


>ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|222861709|gb|EEE99251.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/82 (54%), Positives = 59/82 (71%)
 Frame = -3

Query: 246 MDIPIGDLAEKVGDILENIQQSLFDAAKEKRDACIKVAKTWEEFTTALHEKKLILAPWCD 67
           +DI   +LAEKV D+L++IQ+S+FDAAK+KRDACI+VAKTW+EF  AL ++K+ILAPWCD
Sbjct: 393 VDISCDNLAEKVKDMLDDIQKSMFDAAKQKRDACIQVAKTWDEFKEALSQRKMILAPWCD 452

Query: 66  XXXXXXXXXXXXXXENGACKTL 1
                         E GA K+L
Sbjct: 453 EEEVEKDVKDRTRGEMGAAKSL 474


>gb|ABK95302.1| unknown [Populus trichocarpa]
          Length = 498

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/82 (54%), Positives = 59/82 (71%)
 Frame = -3

Query: 246 MDIPIGDLAEKVGDILENIQQSLFDAAKEKRDACIKVAKTWEEFTTALHEKKLILAPWCD 67
           +DI   +LAEKV D+L++IQ+S+FDAAK+KRDACI+VAKTW+EF  AL ++K+ILAPWCD
Sbjct: 385 VDISCDNLAEKVKDMLDDIQKSMFDAAKQKRDACIQVAKTWDEFKEALSQRKMILAPWCD 444

Query: 66  XXXXXXXXXXXXXXENGACKTL 1
                         E GA K+L
Sbjct: 445 EEEVEKDVKDRTRGEMGAAKSL 466


>ref|XP_004167864.1| PREDICTED: proline--tRNA ligase-like, partial [Cucumis sativus]
          Length = 227

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/81 (58%), Positives = 54/81 (66%)
 Frame = -3

Query: 243 DIPIGDLAEKVGDILENIQQSLFDAAKEKRDACIKVAKTWEEFTTALHEKKLILAPWCDX 64
           DIP   L E+V ++LE+IQQSLFDAAK KRD CI+V  TWEEFT AL +KK+ILAPWCD 
Sbjct: 115 DIPRDSLVEQVKELLESIQQSLFDAAKVKRDTCIQVINTWEEFTEALGQKKMILAPWCDE 174

Query: 63  XXXXXXXXXXXXXENGACKTL 1
                        E GA KTL
Sbjct: 175 EEVEKDVKTRTKGEMGAAKTL 195


>ref|XP_004152099.1| PREDICTED: bifunctional glutamate/proline--tRNA ligase-like
           [Cucumis sativus]
          Length = 511

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/81 (58%), Positives = 54/81 (66%)
 Frame = -3

Query: 243 DIPIGDLAEKVGDILENIQQSLFDAAKEKRDACIKVAKTWEEFTTALHEKKLILAPWCDX 64
           DIP   L E+V ++LE+IQQSLFDAAK KRD CI+V  TWEEFT AL +KK+ILAPWCD 
Sbjct: 399 DIPRDSLVEQVKELLESIQQSLFDAAKVKRDTCIQVINTWEEFTEALGQKKMILAPWCDE 458

Query: 63  XXXXXXXXXXXXXENGACKTL 1
                        E GA KTL
Sbjct: 459 EEVEKDVKTRTKGEMGAAKTL 479


Top