BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006552
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]         400   e-109
dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica ...   238   1e-60
ref|XP_002282369.1| PREDICTED: transcription factor bHLH95 [Viti...    65   1e-08
ref|XP_001768919.1| predicted protein [Physcomitrella patens sub...    65   2e-08
ref|XP_001783622.1| predicted protein [Physcomitrella patens sub...    65   2e-08

>dbj|BAJ40865.1| bHLH transcriptional factor [Coptis japonica]
          Length = 228

 Score =  400 bits (1027), Expect = e-109
 Identities = 206/211 (97%), Positives = 208/211 (98%)
 Frame = +1

Query: 1   SSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEIVNYIPLASA 180
           SSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEI+ YIPLASA
Sbjct: 18  SSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEIIKYIPLASA 77

Query: 181 RLKSLQNRKESTPLSARPKLASPSIQVSERKSSGSSNSTDCDIRVAPEPSASVAIRVRGD 360
           RLKSLQNRKESTPLS RPKLASPSIQVS+RKSSGSSNSTDCDIRVAPEPSASVAIRVRGD
Sbjct: 78  RLKSLQNRKESTPLSTRPKLASPSIQVSDRKSSGSSNSTDCDIRVAPEPSASVAIRVRGD 137

Query: 361 RVNVSLTDTKGTAQTLLLSAIFDELDAHNLELVRSTHCRDGSKVLHHSESKISDGLERSP 540
           RVNVSLTDTKGTAQTLLLSAIFDELDAHNLELVRSTHCRDGSKVLHHSESKISDGLERSP
Sbjct: 138 RVNVSLTDTKGTAQTLLLSAIFDELDAHNLELVRSTHCRDGSKVLHHSESKISDGLERSP 197

Query: 541 GLLKTRLQELAGRLHKLRKSSSHKRTIDQLD 633
           GLLKTRLQELAGRLHKLRKSSSHKRT DQLD
Sbjct: 198 GLLKTRLQELAGRLHKLRKSSSHKRTFDQLD 228


>dbj|BAJ41095.1| transcriptional factor CjbHLH1 [Coptis japonica var. dissecta]
          Length = 206

 Score =  238 bits (606), Expect = 1e-60
 Identities = 123/130 (94%), Positives = 126/130 (96%)
 Frame = +1

Query: 1   SSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEIVNYIPLASA 180
           SSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEI+ YIPLASA
Sbjct: 43  SSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEIIKYIPLASA 102

Query: 181 RLKSLQNRKESTPLSARPKLASPSIQVSERKSSGSSNSTDCDIRVAPEPSASVAIRVRGD 360
           RLKSLQNRKESTPLS RPKLASPSIQVS+RKSSGSSNST CDIRVAPEPSASVAIRVRGD
Sbjct: 103 RLKSLQNRKESTPLSTRPKLASPSIQVSDRKSSGSSNSTXCDIRVAPEPSASVAIRVRGD 162

Query: 361 RVNVSLTDTK 390
           RV VSLTDT+
Sbjct: 163 RVXVSLTDTR 172


>ref|XP_002282369.1| PREDICTED: transcription factor bHLH95 [Vitis vinifera]
           gi|147766738|emb|CAN74162.1| hypothetical protein
           VITISV_026442 [Vitis vinifera]
           gi|297741258|emb|CBI32389.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
 Frame = +1

Query: 28  ERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEIVNYIPLASARLKSLQNRK 207
           E H   ERERRK MR +F SLHALLP     + ++S+I+DE VNYI      L+ LQ +K
Sbjct: 93  EIHIWTERERRKKMRNMFSSLHALLPQ-LPPKADKSTIVDEAVNYIKTLQHTLQKLQKQK 151

Query: 208 ESTPLSARPKLASPSIQVSERKSSGS------------------SNSTDCDIRVAPEP-- 327
                 A      PSI  S++ +  S                  SNS++  + VA  P  
Sbjct: 152 LERLQGATTVNYEPSIITSQKLAFDSREAFLADQGSSSNLAITPSNSSN-SLSVARVPAV 210

Query: 328 -----SASVAIRVRGDRVNVSLTDTKGTAQTLLLSAIFDELDAHNLELVRSTHCRDGSKV 492
                S +V + V G+   +S+   K      LL+ I   L+ H LE++ +    D ++ 
Sbjct: 211 FQSWTSPNVTLNVCGNEAQISVCSPKKPG---LLTTICYVLEKHKLEVISAHVSSDYNRS 267

Query: 493 LHHSESKISDGLERSP 540
           ++  ++  +  L++ P
Sbjct: 268 MYMIQTNANGALDQFP 283


>ref|XP_001768919.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679831|gb|EDQ66273.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 532

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 16/206 (7%)
 Frame = +1

Query: 1   SSGAPIDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEIVNYIPLASA 180
           S   P+  RE H  +ERERRK M  LF  L  LLPH  T + ++S+++ EI+ YI     
Sbjct: 256 SGKRPVSQRENHIWSERERRKGMNCLFTRLRNLLPH-PTSKTDKSTVIGEIIKYIQSLQV 314

Query: 181 RLKSLQNRKESTPLSARPKLASPSIQVSERKS------SGSSNSTDCDIRVAPEP----- 327
           +L+ L  +++    +    LA P + VS          S    S+   I   P P     
Sbjct: 315 KLEMLTKKRQQVMAAV---LARPGMFVSNNSGLTLVDHSNFDPSSMTAITALPPPGKESC 371

Query: 328 -----SASVAIRVRGDRVNVSLTDTKGTAQTLLLSAIFDELDAHNLELVRSTHCRDGSKV 492
                  +V + V G  +NV +T +    +  LL  +   +  H L+++ +T     + V
Sbjct: 372 LQSYLGTNVGLHVCG--LNVFITTSSPRGRQGLLQQLLVTIHKHQLDVINATISTSSTSV 429

Query: 493 LHHSESKISDGLERSPGLLKTRLQEL 570
            H    + S   E     L + LQ +
Sbjct: 430 FHCLHCQASQNAEVLNNDLHSALQSI 455


>ref|XP_001783622.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162664882|gb|EDQ51586.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 867

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 14/197 (7%)
 Frame = +1

Query: 16   IDARERHKLAERERRKSMRELFLSLHALLPHGNTVRKEQSSILDEIVNYIPLASARLKSL 195
            +  RE H  +ER+RR+SM +L+ ++ ALLPH  +V+ ++++++ +I+NYI    A L+ L
Sbjct: 660  VSQRESHIWSERQRRRSMNQLYTTIRALLPH-QSVKTDKATVVMDIINYIRAMQADLEVL 718

Query: 196  QNRKESTPLSARPKLASPSIQVSERKSSGSSNSTDCDIRVA----PEPSA---------- 333
              R++   L+A      PS   S    +   +++D  +  A    P P +          
Sbjct: 719  SRRRDQL-LAALNLRRQPSQVFSAHGLTCVDHTSDASVLTAVTTLPPPGSVSCLTSFLGN 777

Query: 334  SVAIRVRGDRVNVSLTDTKGTAQTLLLSAIFDELDAHNLELVRSTHCRDGSKVLHHSESK 513
            +VAI + G  V V++T     ++  LL+ I   L  +NL+++ +T     +   +    +
Sbjct: 778  NVAIHICGQHVFVTITSAP-QSRPGLLAQIISTLTNYNLDVLSATVNSRDNTTAYALSVE 836

Query: 514  ISDGLERSPGLLKTRLQ 564
             S  +E     L T+LQ
Sbjct: 837  TSQSVESLGDDLHTQLQ 853