BLASTX nr result

ID: Coptis21_contig00006550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006550
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279093.2| PREDICTED: uncharacterized protein LOC100242...   162   3e-38
emb|CAN78632.1| hypothetical protein VITISV_000033 [Vitis vinifera]   162   3e-38
ref|XP_002312391.1| predicted protein [Populus trichocarpa] gi|2...   155   5e-36
ref|XP_002529123.1| DNA binding protein, putative [Ricinus commu...   153   2e-35
ref|XP_004167252.1| PREDICTED: uncharacterized protein LOC101229...   142   3e-32

>ref|XP_002279093.2| PREDICTED: uncharacterized protein LOC100242253 [Vitis vinifera]
          Length = 731

 Score =  162 bits (411), Expect = 3e-38
 Identities = 94/191 (49%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
 Frame = +2

Query: 17  KREVNYYLKRRDGKASDLAVIGKERSIRHMFYHFAHSDDDDXXXXXXXXXXXXXGFVPPH 196
           +REV+YYLKR+DG +SDLAVIGKE+S+RHM YH+A  +                   P  
Sbjct: 31  RREVHYYLKRKDG-SSDLAVIGKEKSLRHMSYHYAIRNRS------------LISIAPSS 77

Query: 197 N-VKLKSRREVLDWLSSVVSGIIISHLLQLAESN*IRYLLCQDSLPRGSFQHVSRFFENE 373
           + VKL+SRREV+DWL+S+V  + +    Q                P G  Q+       +
Sbjct: 78  SLVKLRSRREVIDWLNSLVQDLSLPKTPQ----------------PTGPSQN-----NKD 116

Query: 374 GFNATLKDSRIRNLGVQTKAFLWLGSSWTCRKRRKHYRSFCRNGITISVHDFVYVLAEEN 553
            +  +LKD +++ LG  TK FLWLGS WTCRKRR HY+SF RNGI ISVHDFVYVLAEE+
Sbjct: 117 AYIDSLKDIQLQRLGHFTKEFLWLGSPWTCRKRRNHYQSFRRNGIKISVHDFVYVLAEED 176

Query: 554 KRLVTYLEDLY 586
           KRLV YLED+Y
Sbjct: 177 KRLVAYLEDMY 187


>emb|CAN78632.1| hypothetical protein VITISV_000033 [Vitis vinifera]
          Length = 669

 Score =  162 bits (411), Expect = 3e-38
 Identities = 94/191 (49%), Positives = 119/191 (62%), Gaps = 1/191 (0%)
 Frame = +2

Query: 17  KREVNYYLKRRDGKASDLAVIGKERSIRHMFYHFAHSDDDDXXXXXXXXXXXXXGFVPPH 196
           +REV+YYLKR+DG +SDLAVIGKE+S+RHM YH+A  +                   P  
Sbjct: 31  RREVHYYLKRKDG-SSDLAVIGKEKSLRHMSYHYAIRNRS------------LISIAPSS 77

Query: 197 N-VKLKSRREVLDWLSSVVSGIIISHLLQLAESN*IRYLLCQDSLPRGSFQHVSRFFENE 373
           + VKL+SRREV+DWL+S+V  + +    Q                P G  Q+       +
Sbjct: 78  SLVKLRSRREVIDWLNSLVQDLSLPKTPQ----------------PTGPSQN-----NKD 116

Query: 374 GFNATLKDSRIRNLGVQTKAFLWLGSSWTCRKRRKHYRSFCRNGITISVHDFVYVLAEEN 553
            +  +LKD +++ LG  TK FLWLGS WTCRKRR HY+SF RNGI ISVHDFVYVLAEE+
Sbjct: 117 AYIDSLKDIQLQRLGHFTKEFLWLGSPWTCRKRRNHYQSFRRNGIKISVHDFVYVLAEED 176

Query: 554 KRLVTYLEDLY 586
           KRLV YLED+Y
Sbjct: 177 KRLVAYLEDMY 187


>ref|XP_002312391.1| predicted protein [Populus trichocarpa] gi|222852211|gb|EEE89758.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  155 bits (392), Expect = 5e-36
 Identities = 93/192 (48%), Positives = 113/192 (58%), Gaps = 2/192 (1%)
 Frame = +2

Query: 17  KREVNYYLKRRDGKASDLAVIGKERSIRHMFYHFAHSDDDDXXXXXXXXXXXXXGFVPPH 196
           +REV YYLK+ DG   DLA+IGKE+S+RHM Y+FA S                    PP 
Sbjct: 15  RREVKYYLKKNDG-GIDLAIIGKEKSLRHMSYYFAIS-----------IRSNFYSMTPP- 61

Query: 197 NVKLKSRREVLDWLSSVVSGIIISHLLQLAESN*IRYLLCQDSLPRGSFQHVS--RFFEN 370
            VKLKSRREV+DWL+S+VS               +++L       R  F+      FF  
Sbjct: 62  -VKLKSRREVIDWLNSIVS---------------VQFLFA-SLAARSLFEPCDFILFFSE 104

Query: 371 EGFNATLKDSRIRNLGVQTKAFLWLGSSWTCRKRRKHYRSFCRNGITISVHDFVYVLAEE 550
           +       D++ + LG     FLWLGS WTCRKR+KHY SFCRNG+ ISVHDFVYVLAEE
Sbjct: 105 D-------DNQSQKLGHYYSEFLWLGSPWTCRKRKKHYESFCRNGVKISVHDFVYVLAEE 157

Query: 551 NKRLVTYLEDLY 586
           +KRLV YLEDLY
Sbjct: 158 SKRLVAYLEDLY 169


>ref|XP_002529123.1| DNA binding protein, putative [Ricinus communis]
           gi|223531402|gb|EEF33236.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 685

 Score =  153 bits (386), Expect = 2e-35
 Identities = 90/194 (46%), Positives = 117/194 (60%), Gaps = 4/194 (2%)
 Frame = +2

Query: 17  KREVNYYLKRRDGKASDLAVIGKERSIRHMFYHFAHSDDDDXXXXXXXXXXXXXGFVPPH 196
           +REV+YYLKR+DG   DLAVIGKERS+RHM YH+A +  ++                   
Sbjct: 25  RREVHYYLKRKDG-GLDLAVIGKERSLRHMSYHYAAAIINNSPSTGLW------------ 71

Query: 197 NVKLKSRREVLDWLSSVVSGIIISHLLQLAESN*IRYLLCQDSLPRGSFQHVSRFFENEG 376
             KLKSRREV+DWL+S+VS                      DS P   F H+S + +N  
Sbjct: 72  --KLKSRREVVDWLNSIVS----------------------DSTPLELF-HLSGYLDNID 106

Query: 377 FNA----TLKDSRIRNLGVQTKAFLWLGSSWTCRKRRKHYRSFCRNGITISVHDFVYVLA 544
            +       K +++R LG  TK F WLG SWTCR+RRKHY+SF RNG+ ISV+DFV+VLA
Sbjct: 107 ASELDIDNFKGTQLRKLGQYTKEFSWLGPSWTCRRRRKHYQSFSRNGVEISVYDFVFVLA 166

Query: 545 EENKRLVTYLEDLY 586
           EE+K+LV +LED+Y
Sbjct: 167 EEDKQLVAHLEDMY 180


>ref|XP_004167252.1| PREDICTED: uncharacterized protein LOC101229627 [Cucumis sativus]
          Length = 692

 Score =  142 bits (359), Expect = 3e-32
 Identities = 87/190 (45%), Positives = 111/190 (58%)
 Frame = +2

Query: 17  KREVNYYLKRRDGKASDLAVIGKERSIRHMFYHFAHSDDDDXXXXXXXXXXXXXGFVPPH 196
           +REV+YYLK  DG ASDLAV+GKE+S+RHM YH+A  +                G     
Sbjct: 40  RREVHYYLKSGDG-ASDLAVVGKEKSLRHMSYHYALQN----------RFLNSLGLFTSL 88

Query: 197 NVKLKSRREVLDWLSSVVSGIIISHLLQLAESN*IRYLLCQDSLPRGSFQHVSRFFENEG 376
             KLKSRREV++WLSSVVS    S       S+ +  +  +D+ P  S            
Sbjct: 89  T-KLKSRREVVEWLSSVVSD---SQRKTSQPSDRMMDIEGEDACPSNS------------ 132

Query: 377 FNATLKDSRIRNLGVQTKAFLWLGSSWTCRKRRKHYRSFCRNGITISVHDFVYVLAEENK 556
              + KD +   LG  T+ F W+G  WTC+++R+HY SF RNG+ ISVHDFVYVLAEE K
Sbjct: 133 --GSKKDVQYIKLGQYTRDFSWVGCPWTCKRKRRHYPSFSRNGVKISVHDFVYVLAEEGK 190

Query: 557 RLVTYLEDLY 586
           RLV YLED+Y
Sbjct: 191 RLVAYLEDMY 200


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