BLASTX nr result

ID: Coptis21_contig00006478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006478
         (1829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263596.2| PREDICTED: AT-rich interactive domain-contai...   506   e-140
ref|XP_004146183.1| PREDICTED: AT-rich interactive domain-contai...   493   e-137
ref|XP_004169997.1| PREDICTED: AT-rich interactive domain-contai...   491   e-136
ref|XP_003537701.1| PREDICTED: uncharacterized protein LOC100791...   483   e-134
emb|CBI37495.3| unnamed protein product [Vitis vinifera]              482   e-133

>ref|XP_002263596.2| PREDICTED: AT-rich interactive domain-containing protein 3-like
            [Vitis vinifera]
          Length = 578

 Score =  506 bits (1302), Expect = e-140
 Identities = 249/328 (75%), Positives = 279/328 (85%)
 Frame = +1

Query: 376  PRNIGTSNNQLVLAGPYTFDGDDTGTEEEQAAFIVELDNFFRERGLEFKHPKFYGEGLNC 555
            PR  G  N   +L     ++G+++GTEEEQ AF+ EL+NFFRER +EFK PKFYGEGLNC
Sbjct: 259  PRENGNLNQSFLLE-TNLYEGNESGTEEEQVAFMKELENFFRERSMEFKPPKFYGEGLNC 317

Query: 556  LKLWRAVTGLGGYDRVTACKLWRQVGESFKPPKTCTTVSWSFRIFYEKSLLDYERHKMRG 735
            LKLWRAVT LGGYD+VT+CKLWRQVGESFKPPKTCTTVSW+FR FYEK+LLDYERHK RG
Sbjct: 318  LKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTRG 377

Query: 736  GELHIPASPLSEPMSVDNHMIGHQGSGSGXXXXXXXXXXMQGWHSQRLLGNGEVGDPIIK 915
            GEL +P S L+EPM+V+N     Q SGSG          MQGWHSQRLLGNGEVGDPIIK
Sbjct: 378  GELSVPVSSLAEPMNVEN-----QASGSGRARRDAAARAMQGWHSQRLLGNGEVGDPIIK 432

Query: 916  DKHSMSMPKREKQLKSVGLLKRKKSSIMDRSVKAARTITKVSKPQIETEVVDLGPAADWV 1095
            DK S+S+ KREKQLK++GLLKRKK S ++ +VKAAR  TK +KPQ++T VVD+GP ADWV
Sbjct: 433  DKSSISLQKREKQLKNIGLLKRKKPSNLEHAVKAAR--TKAAKPQLDTAVVDIGPPADWV 490

Query: 1096 KINVRRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGDPEQPDNPWGVTPFKKVVSLP 1275
            KINVRRTKDCFEVYALVPGLLREEVRVQSDPAGRLVI+G+PE PDNPWGVTPFKKVVSLP
Sbjct: 491  KINVRRTKDCFEVYALVPGLLREEVRVQSDPAGRLVITGEPEHPDNPWGVTPFKKVVSLP 550

Query: 1276 SRIDPHQTSAVVTLHGQLFVRVPFEQSD 1359
            SRIDPHQTSAVVTLHGQLFVRVPFEQSD
Sbjct: 551  SRIDPHQTSAVVTLHGQLFVRVPFEQSD 578


>ref|XP_004146183.1| PREDICTED: AT-rich interactive domain-containing protein 3-like
            [Cucumis sativus]
          Length = 510

 Score =  493 bits (1268), Expect = e-137
 Identities = 241/319 (75%), Positives = 271/319 (84%)
 Frame = +1

Query: 397  NNQLVLAGPYTFDGDDTGTEEEQAAFIVELDNFFRERGLEFKHPKFYGEGLNCLKLWRAV 576
            N+  +L   +  +G ++GTEEEQ+AF+ EL+NFFRER LEFK PKFYGEGLNCLKLWRAV
Sbjct: 197  NHSFLLDENHIAEGSESGTEEEQSAFMKELENFFRERSLEFKPPKFYGEGLNCLKLWRAV 256

Query: 577  TGLGGYDRVTACKLWRQVGESFKPPKTCTTVSWSFRIFYEKSLLDYERHKMRGGELHIPA 756
            T LGGYD+VT+CKLWRQVGESFKPPKTCTTVSW+FR FYEK+LLDYERHK  GGEL +P 
Sbjct: 257  TRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTNGGELSVPI 316

Query: 757  SPLSEPMSVDNHMIGHQGSGSGXXXXXXXXXXMQGWHSQRLLGNGEVGDPIIKDKHSMSM 936
            +  SEPMS++N     QGSGSG          MQGWHSQRLLGNGEV DPIIKDK+S+SM
Sbjct: 317  ASNSEPMSIEN-----QGSGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSLSM 371

Query: 937  PKREKQLKSVGLLKRKKSSIMDRSVKAARTITKVSKPQIETEVVDLGPAADWVKINVRRT 1116
             KREKQLKS+GLLKRKK S M+ S+K+AR  TK  KPQ++  VVD+G  ADWVK+NV++T
Sbjct: 372  QKREKQLKSIGLLKRKKPSYMEHSMKSAR--TKSPKPQLDVAVVDIGQPADWVKVNVQKT 429

Query: 1117 KDCFEVYALVPGLLREEVRVQSDPAGRLVISGDPEQPDNPWGVTPFKKVVSLPSRIDPHQ 1296
            KDC+EVYALVPGLLREEVRVQSDPAGRLVISGDPE PDNPWGVTPFKKVVSLPSRIDPHQ
Sbjct: 430  KDCYEVYALVPGLLREEVRVQSDPAGRLVISGDPEHPDNPWGVTPFKKVVSLPSRIDPHQ 489

Query: 1297 TSAVVTLHGQLFVRVPFEQ 1353
            TSAVVTLHGQLFVRVPFEQ
Sbjct: 490  TSAVVTLHGQLFVRVPFEQ 508


>ref|XP_004169997.1| PREDICTED: AT-rich interactive domain-containing protein 3-like
            [Cucumis sativus]
          Length = 510

 Score =  491 bits (1265), Expect = e-136
 Identities = 240/319 (75%), Positives = 271/319 (84%)
 Frame = +1

Query: 397  NNQLVLAGPYTFDGDDTGTEEEQAAFIVELDNFFRERGLEFKHPKFYGEGLNCLKLWRAV 576
            N+  +L   +  +G ++GTEEEQ+AF+ EL+NFFRER LEFK PKFYGEGLNCLKLWRAV
Sbjct: 197  NHSFLLDENHIAEGSESGTEEEQSAFMKELENFFRERSLEFKPPKFYGEGLNCLKLWRAV 256

Query: 577  TGLGGYDRVTACKLWRQVGESFKPPKTCTTVSWSFRIFYEKSLLDYERHKMRGGELHIPA 756
            T LGGYD+VT+CKLWRQVGESFKPPKTCTTVSW+FR FYEK+LLDYERHK  GGEL +P 
Sbjct: 257  TRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTNGGELSVPI 316

Query: 757  SPLSEPMSVDNHMIGHQGSGSGXXXXXXXXXXMQGWHSQRLLGNGEVGDPIIKDKHSMSM 936
            +  SEPM+++N     QGSGSG          MQGWHSQRLLGNGEV DPIIKDK+S+SM
Sbjct: 317  ASNSEPMNIEN-----QGSGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSLSM 371

Query: 937  PKREKQLKSVGLLKRKKSSIMDRSVKAARTITKVSKPQIETEVVDLGPAADWVKINVRRT 1116
             KREKQLKS+GLLKRKK S M+ S+K+AR  TK  KPQ++  VVD+G  ADWVK+NV++T
Sbjct: 372  QKREKQLKSIGLLKRKKPSYMEHSMKSAR--TKSPKPQLDVAVVDIGQPADWVKVNVQKT 429

Query: 1117 KDCFEVYALVPGLLREEVRVQSDPAGRLVISGDPEQPDNPWGVTPFKKVVSLPSRIDPHQ 1296
            KDC+EVYALVPGLLREEVRVQSDPAGRLVISGDPE PDNPWGVTPFKKVVSLPSRIDPHQ
Sbjct: 430  KDCYEVYALVPGLLREEVRVQSDPAGRLVISGDPEHPDNPWGVTPFKKVVSLPSRIDPHQ 489

Query: 1297 TSAVVTLHGQLFVRVPFEQ 1353
            TSAVVTLHGQLFVRVPFEQ
Sbjct: 490  TSAVVTLHGQLFVRVPFEQ 508


>ref|XP_003537701.1| PREDICTED: uncharacterized protein LOC100791081 [Glycine max]
          Length = 528

 Score =  483 bits (1243), Expect = e-134
 Identities = 236/332 (71%), Positives = 281/332 (84%), Gaps = 4/332 (1%)
 Frame = +1

Query: 376  PRNIGTSNNQ--LVLAGPYTFDGDDTGTEEEQAAFIVELDNFFRERGLEFKHPKFYGEGL 549
            P + G SN++  L L   +++DG+++GTEEEQ+AF+ EL+NFFRER +EFK PKFYGEGL
Sbjct: 204  PADNGNSNSKHMLFLDADHSYDGNESGTEEEQSAFMKELENFFRERSMEFKPPKFYGEGL 263

Query: 550  NCLKLWRAVTGLGGYDRVTACKLWRQVGESFKPPKTCTTVSWSFRIFYEKSLLDYERHKM 729
            NCLKLWRAVT LGGYD+VT+CKLWRQVGESFKPPKTCTTVSW+FR FYEK+LLDYERHK+
Sbjct: 264  NCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKI 323

Query: 730  RGGELHIPASPLSEPMSVDNHMIGHQGSGSGXXXXXXXXXXMQGWHSQRLLGNGEVGDPI 909
            +GGEL++P +   EP++++N     Q S SG          MQGWHSQRLLGNGEV DPI
Sbjct: 324  QGGELNVPVASHPEPINIEN-----QASASGRARRDAAARAMQGWHSQRLLGNGEVSDPI 378

Query: 910  IKDKHSMSMPKREKQLKSVGLLKRKK--SSIMDRSVKAARTITKVSKPQIETEVVDLGPA 1083
            IKD++S+S+ KREKQLKS+ + KRKK  S  MD +VKAAR  +K SKPQ++T V+D+GP 
Sbjct: 379  IKDRNSVSVQKREKQLKSINIHKRKKPSSPYMDNAVKAAR--SKPSKPQLDTTVIDIGPP 436

Query: 1084 ADWVKINVRRTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGDPEQPDNPWGVTPFKKV 1263
            ADWVK+NV++TKDCFEVYALVPGLLREEVRVQSDPAGRLVISG+PE P+NPWGVTPFKKV
Sbjct: 437  ADWVKVNVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKV 496

Query: 1264 VSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSD 1359
            VSLPSRIDPHQTSAVVTLHGQLFVRVPFE ++
Sbjct: 497  VSLPSRIDPHQTSAVVTLHGQLFVRVPFEHAE 528


>emb|CBI37495.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score =  482 bits (1240), Expect = e-133
 Identities = 235/293 (80%), Positives = 258/293 (88%)
 Frame = +1

Query: 481  ELDNFFRERGLEFKHPKFYGEGLNCLKLWRAVTGLGGYDRVTACKLWRQVGESFKPPKTC 660
            EL+NFFRER +EFK PKFYGEGLNCLKLWRAVT LGGYD+VT+CKLWRQVGESFKPPKTC
Sbjct: 3    ELENFFRERSMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTSCKLWRQVGESFKPPKTC 62

Query: 661  TTVSWSFRIFYEKSLLDYERHKMRGGELHIPASPLSEPMSVDNHMIGHQGSGSGXXXXXX 840
            TTVSW+FR FYEK+LLDYERHK RGGEL +P S L+EPM+V+N     Q SGSG      
Sbjct: 63   TTVSWTFRGFYEKALLDYERHKTRGGELSVPVSSLAEPMNVEN-----QASGSGRARRDA 117

Query: 841  XXXXMQGWHSQRLLGNGEVGDPIIKDKHSMSMPKREKQLKSVGLLKRKKSSIMDRSVKAA 1020
                MQGWHSQRLLGNGEVGDPIIKDK S+S+ KREKQLK++GLLKRKK S ++ +VKAA
Sbjct: 118  AARAMQGWHSQRLLGNGEVGDPIIKDKSSISLQKREKQLKNIGLLKRKKPSNLEHAVKAA 177

Query: 1021 RTITKVSKPQIETEVVDLGPAADWVKINVRRTKDCFEVYALVPGLLREEVRVQSDPAGRL 1200
            RT  K +KPQ++T VVD+GP ADWVKINVRRTKDCFEVYALVPGLLREEVRVQSDPAGRL
Sbjct: 178  RT--KAAKPQLDTAVVDIGPPADWVKINVRRTKDCFEVYALVPGLLREEVRVQSDPAGRL 235

Query: 1201 VISGDPEQPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSD 1359
            VI+G+PE PDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSD
Sbjct: 236  VITGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSD 288


Top