BLASTX nr result

ID: Coptis21_contig00006444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006444
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283490.1| PREDICTED: profilin-1 isoform 1 [Vitis vinif...   252   8e-65
gb|AFK38257.1| unknown [Lotus japonicus] gi|388513519|gb|AFK4482...   252   1e-64
ref|XP_002299743.1| predicted protein [Populus trichocarpa] gi|1...   251   2e-64
gb|AAP15200.1| profilin-like protein [Humulus scandens]               249   9e-64
ref|NP_001234138.1| profilin [Solanum lycopersicum] gi|17224229|...   249   9e-64

>ref|XP_002283490.1| PREDICTED: profilin-1 isoform 1 [Vitis vinifera]
           gi|147859095|emb|CAN80411.1| hypothetical protein
           VITISV_018934 [Vitis vinifera]
           gi|297743173|emb|CBI36040.3| unnamed protein product
           [Vitis vinifera]
          Length = 131

 Score =  252 bits (644), Expect = 8e-65
 Identities = 117/131 (89%), Positives = 124/131 (94%)
 Frame = +3

Query: 192 MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSANFPQFKPEEITGIMTDFEEPGSL 371
           MSWQTYVDDHLMC+I+GNHLTSAAIIGHDGSVWAQS  FPQFKPEEITGIM DF EPG L
Sbjct: 1   MSWQTYVDDHLMCDIDGNHLTSAAIIGHDGSVWAQSETFPQFKPEEITGIMNDFNEPGFL 60

Query: 372 APTGLYLGGTKYMVIQGEAGAVIRGKKGSGGVTIKKTSQALVFGVYDEPLTPGQCNMIVE 551
           APTGLYLGGTKYMVIQGE GAVIRGKKGSGGVTIKKT QAL+FG+Y+EPLTPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGSGGVTIKKTGQALIFGIYEEPLTPGQCNMIVE 120

Query: 552 RLGDYLIDQGL 584
           R+GDYL+DQGL
Sbjct: 121 RMGDYLVDQGL 131


>gb|AFK38257.1| unknown [Lotus japonicus] gi|388513519|gb|AFK44821.1| unknown
           [Lotus japonicus]
          Length = 131

 Score =  252 bits (643), Expect = 1e-64
 Identities = 117/131 (89%), Positives = 125/131 (95%)
 Frame = +3

Query: 192 MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSANFPQFKPEEITGIMTDFEEPGSL 371
           MSWQTYVDDHL+CEIEGNHL+SAAI+G DGSVWAQSANFPQFKPEEITGIM DF EPGSL
Sbjct: 1   MSWQTYVDDHLLCEIEGNHLSSAAILGQDGSVWAQSANFPQFKPEEITGIMNDFAEPGSL 60

Query: 372 APTGLYLGGTKYMVIQGEAGAVIRGKKGSGGVTIKKTSQALVFGVYDEPLTPGQCNMIVE 551
           APTGLYLGGTKYMVIQGE GAVIRGKKG GGVT+KKT+QAL+ G+YDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 552 RLGDYLIDQGL 584
           RLGDYLIDQGL
Sbjct: 121 RLGDYLIDQGL 131


>ref|XP_002299743.1| predicted protein [Populus trichocarpa] gi|118488316|gb|ABK95977.1|
           unknown [Populus trichocarpa]
           gi|222847001|gb|EEE84548.1| predicted protein [Populus
           trichocarpa]
          Length = 131

 Score =  251 bits (640), Expect = 2e-64
 Identities = 119/131 (90%), Positives = 125/131 (95%)
 Frame = +3

Query: 192 MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSANFPQFKPEEITGIMTDFEEPGSL 371
           MSWQTYVDDHLMCEIEGNHLT+AAIIGHDGSVWAQSA FPQFKPEEI+ IM DF+EPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTAAAIIGHDGSVWAQSATFPQFKPEEISAIMKDFDEPGSL 60

Query: 372 APTGLYLGGTKYMVIQGEAGAVIRGKKGSGGVTIKKTSQALVFGVYDEPLTPGQCNMIVE 551
           APTGL+LGGTKYMVIQGE GAVIRGKKGSGGVT+KKTSQALV G+YDEPLTPGQCNMIVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGSGGVTVKKTSQALVIGLYDEPLTPGQCNMIVE 120

Query: 552 RLGDYLIDQGL 584
           RLGDYLIDQ L
Sbjct: 121 RLGDYLIDQDL 131


>gb|AAP15200.1| profilin-like protein [Humulus scandens]
          Length = 131

 Score =  249 bits (635), Expect = 9e-64
 Identities = 116/131 (88%), Positives = 124/131 (94%)
 Frame = +3

Query: 192 MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSANFPQFKPEEITGIMTDFEEPGSL 371
           MSWQ YVDDHLMCEI+GNHL++AAIIGHDGSVWAQSA FPQ KPEE+TGIM DF EPG+L
Sbjct: 1   MSWQAYVDDHLMCEIDGNHLSAAAIIGHDGSVWAQSAAFPQLKPEEVTGIMNDFNEPGTL 60

Query: 372 APTGLYLGGTKYMVIQGEAGAVIRGKKGSGGVTIKKTSQALVFGVYDEPLTPGQCNMIVE 551
           APTGLYLGGTKYMVIQGE GAVIRGKKG+GGVTIKKTSQAL+ GVYDEP+TPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGAGGVTIKKTSQALIIGVYDEPMTPGQCNMIVE 120

Query: 552 RLGDYLIDQGL 584
           RLGDYLIDQGL
Sbjct: 121 RLGDYLIDQGL 131


>ref|NP_001234138.1| profilin [Solanum lycopersicum] gi|17224229|gb|AAL29690.1| profilin
           [Solanum lycopersicum]
          Length = 131

 Score =  249 bits (635), Expect = 9e-64
 Identities = 114/131 (87%), Positives = 126/131 (96%)
 Frame = +3

Query: 192 MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSANFPQFKPEEITGIMTDFEEPGSL 371
           MSWQTYVDDHLMC+IEGNHLTSAAIIG DGSVWAQSANFPQFKPEEIT IM DF EPG+L
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSANFPQFKPEEITAIMNDFAEPGTL 60

Query: 372 APTGLYLGGTKYMVIQGEAGAVIRGKKGSGGVTIKKTSQALVFGVYDEPLTPGQCNMIVE 551
           APTGL+LGGTKYMVIQGEAGAVIRGKKG+GG+T+KKT+QAL+ G+YDEP+TPGQCNMIVE
Sbjct: 61  APTGLHLGGTKYMVIQGEAGAVIRGKKGAGGITVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 552 RLGDYLIDQGL 584
           RLGDY+I+QGL
Sbjct: 121 RLGDYIIEQGL 131


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