BLASTX nr result

ID: Coptis21_contig00006398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006398
         (1945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635049.1| PREDICTED: cysteine desulfurase 1, mitochond...   753   0.0  
ref|XP_004143418.1| PREDICTED: cysteine desulfurase 1, mitochond...   749   0.0  
ref|XP_003611517.1| Cysteine desulfurase [Medicago truncatula] g...   749   0.0  
ref|XP_002276621.1| PREDICTED: cysteine desulfurase 1, mitochond...   746   0.0  
ref|XP_002310363.1| predicted protein [Populus trichocarpa] gi|2...   746   0.0  

>ref|XP_003635049.1| PREDICTED: cysteine desulfurase 1, mitochondrial-like [Vitis
            vinifera]
          Length = 454

 Score =  753 bits (1945), Expect = 0.0
 Identities = 377/453 (83%), Positives = 418/453 (92%), Gaps = 3/453 (0%)
 Frame = +3

Query: 84   SSKLLITKLNQ-LRTLTPLIS-KPFSTSAAAIATE-VEEEGGISMKGVKISGRPLYLDMQ 254
            +S+L  ++L Q L+T +P+   +  ST+ AA A E  E+  GISMKGVKISGRPLYLDMQ
Sbjct: 2    ASRLHSSRLFQTLKTTSPICRLRHLSTATAAAAKESYEDADGISMKGVKISGRPLYLDMQ 61

Query: 255  ATSPVDPRVLDCMLPYNISLYGNPHSRTHLYGWESDSAVEIARNQVASLVKASPKEIVFT 434
            ATSPVDPRVLD MLPY +S +GNPHSRTHLYGWESD AVE AR QVA+L+ ASPKEIVFT
Sbjct: 62   ATSPVDPRVLDAMLPYYLSSFGNPHSRTHLYGWESDLAVEKARAQVAALINASPKEIVFT 121

Query: 435  SGATESNNISVKGVMHFYREKKKHVITTQTEHKCVLDSCRHLQQEGFDVSYLPVGKDGIL 614
            SGATESNNISVKGVMHFY+EKK+HVITTQTEHKCVLDSCRHLQQEGF+V+YLPVG DGI+
Sbjct: 122  SGATESNNISVKGVMHFYKEKKRHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVGSDGIV 181

Query: 615  DLDLFRKSIRPDTGLVSVMMVNNEIGVIQPMEEIGKICKEFGIPFHTDAAQALGKVPIDV 794
            D+D  R +IRPDTGLVSVM VNNEIGVIQP+EEIG IC+E G+PFHTDAAQALGK+P+DV
Sbjct: 182  DIDQMRSAIRPDTGLVSVMTVNNEIGVIQPIEEIGNICRELGVPFHTDAAQALGKIPVDV 241

Query: 795  DKMNISLMSLSGHKIYGPKGVGALYMKRRPRIRVEPQMNGGGQERGIRSGTVPTPLVVGM 974
            +KMN+SLMSLSGHKIYGPKGVGALYM+RRPRIRVEPQMNGGGQERGIRSGTVPTPLVVGM
Sbjct: 242  EKMNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPQMNGGGQERGIRSGTVPTPLVVGM 301

Query: 975  GAACELAMKEMEYDEKRIKGLHERLLNGIRSKIDGVVVNGSTERRYAGNLNISFAYVEGE 1154
            GAACELAMKEMEYD+KRI  L ERLLNGI++K+DGVVVNGS E+RYAGNLN+SFAYVEGE
Sbjct: 302  GAACELAMKEMEYDDKRISDLQERLLNGIKAKLDGVVVNGSKEKRYAGNLNLSFAYVEGE 361

Query: 1155 SLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTEAEVDRAVE 1334
            SLLMGLKEVAVSSGSACTSASLEPSYVLRALGV+EDMAHTSIRFGIGRFTTEAE+DRAVE
Sbjct: 362  SLLMGLKEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEIDRAVE 421

Query: 1335 LTVKQVEKLRDMSPLYEMVKEGIDIKNIQWSQH 1433
            LTV+QVEKLR+MSPLYEMVKEGIDIK+IQW+QH
Sbjct: 422  LTVQQVEKLREMSPLYEMVKEGIDIKSIQWAQH 454


>ref|XP_004143418.1| PREDICTED: cysteine desulfurase 1, mitochondrial-like isoform 1
            [Cucumis sativus] gi|449451339|ref|XP_004143419.1|
            PREDICTED: cysteine desulfurase 1, mitochondrial-like
            isoform 2 [Cucumis sativus]
            gi|449525720|ref|XP_004169864.1| PREDICTED: LOW QUALITY
            PROTEIN: cysteine desulfurase 1, mitochondrial-like
            [Cucumis sativus]
          Length = 458

 Score =  749 bits (1934), Expect = 0.0
 Identities = 376/459 (81%), Positives = 415/459 (90%), Gaps = 9/459 (1%)
 Frame = +3

Query: 84   SSKLLITKLNQLRTLTPLIS-----KPFSTSAAAIATEV----EEEGGISMKGVKISGRP 236
            +SK+L + L   RTL+   S     +P ST+AAA+A       E+E GISMKGVKISGRP
Sbjct: 2    ASKILASTLR--RTLSNSSSPISRFRPISTAAAAVAASPSEPHEDETGISMKGVKISGRP 59

Query: 237  LYLDMQATSPVDPRVLDCMLPYNISLYGNPHSRTHLYGWESDSAVEIARNQVASLVKASP 416
            LYLDMQATSPVDPRVLD MLPY IS YGNPHSRTHLYGWESD AVE AR+QVA+L+ ASP
Sbjct: 60   LYLDMQATSPVDPRVLDAMLPYYISRYGNPHSRTHLYGWESDHAVETARSQVAALIGASP 119

Query: 417  KEIVFTSGATESNNISVKGVMHFYREKKKHVITTQTEHKCVLDSCRHLQQEGFDVSYLPV 596
            KEIVFTSGATESNNIS+KGVMHFYR+KK+H+ITTQTEHKCVLDSCRHLQQEGF+++YLPV
Sbjct: 120  KEIVFTSGATESNNISIKGVMHFYRDKKRHLITTQTEHKCVLDSCRHLQQEGFEITYLPV 179

Query: 597  GKDGILDLDLFRKSIRPDTGLVSVMMVNNEIGVIQPMEEIGKICKEFGIPFHTDAAQALG 776
            G DGI+DL+  R +IRPDTGLVSVM VNNEIGVIQP+EEIGKICKEF +PFHTDAAQALG
Sbjct: 180  GSDGIVDLEKLRSAIRPDTGLVSVMAVNNEIGVIQPVEEIGKICKEFNVPFHTDAAQALG 239

Query: 777  KVPIDVDKMNISLMSLSGHKIYGPKGVGALYMKRRPRIRVEPQMNGGGQERGIRSGTVPT 956
            K+PIDV+K N+SLMSLSGHKIYGPKG+GALYM+RRPRIRVEPQMNGGGQERGIRSGTVPT
Sbjct: 240  KIPIDVEKWNVSLMSLSGHKIYGPKGIGALYMRRRPRIRVEPQMNGGGQERGIRSGTVPT 299

Query: 957  PLVVGMGAACELAMKEMEYDEKRIKGLHERLLNGIRSKIDGVVVNGSTERRYAGNLNISF 1136
            PLVVGMGAACELAMKEMEYD+KRI  L ERLLNGI +K++GVVVNGS E RY GNLN+SF
Sbjct: 300  PLVVGMGAACELAMKEMEYDDKRITALQERLLNGINAKLEGVVVNGSMENRYPGNLNLSF 359

Query: 1137 AYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTEAE 1316
            AYVEGESLLMGLK+VAVSSGSACTSASLEPSYVLRALGV+EDMAHTSIRFGIGRFTTEAE
Sbjct: 360  AYVEGESLLMGLKDVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAE 419

Query: 1317 VDRAVELTVKQVEKLRDMSPLYEMVKEGIDIKNIQWSQH 1433
            +DRAVELTV QVEKLR+MSPLYEMVKEGI+IK IQW+QH
Sbjct: 420  IDRAVELTVHQVEKLREMSPLYEMVKEGINIKEIQWAQH 458


>ref|XP_003611517.1| Cysteine desulfurase [Medicago truncatula]
            gi|355512852|gb|AES94475.1| Cysteine desulfurase
            [Medicago truncatula]
          Length = 454

 Score =  749 bits (1934), Expect = 0.0
 Identities = 370/453 (81%), Positives = 411/453 (90%), Gaps = 3/453 (0%)
 Frame = +3

Query: 84   SSKLLITKLNQLRTLTPLISK-PFSTSAAAIATEVEEE--GGISMKGVKISGRPLYLDMQ 254
            +SKL  + L    T  P + + PFST+AAA  TE  EE   GI+MKGVKISGRPLYLD+Q
Sbjct: 2    TSKLFASLLRNHLTKKPHLRRHPFSTAAAAALTEPHEETTAGITMKGVKISGRPLYLDVQ 61

Query: 255  ATSPVDPRVLDCMLPYNISLYGNPHSRTHLYGWESDSAVEIARNQVASLVKASPKEIVFT 434
            ATSPVDPRVLD MLP+ +S YGNPHSRTH YGWESD A+E AR+QVA+L+ ASPKEIVFT
Sbjct: 62   ATSPVDPRVLDAMLPFYLSRYGNPHSRTHFYGWESDDAIEHARSQVAALISASPKEIVFT 121

Query: 435  SGATESNNISVKGVMHFYREKKKHVITTQTEHKCVLDSCRHLQQEGFDVSYLPVGKDGIL 614
            SGATESNNIS+KGV+HFY+EKKKHVITTQTEHKCVLDSCRHLQQEGFDV+YLPV  DG++
Sbjct: 122  SGATESNNISIKGVLHFYKEKKKHVITTQTEHKCVLDSCRHLQQEGFDVTYLPVESDGLV 181

Query: 615  DLDLFRKSIRPDTGLVSVMMVNNEIGVIQPMEEIGKICKEFGIPFHTDAAQALGKVPIDV 794
            DL+  R +IRPDTGLVSVM VNNEIGV+QPMEEIGKICKEFG+ FHTDAAQALGK+P+DV
Sbjct: 182  DLEKLRSAIRPDTGLVSVMAVNNEIGVVQPMEEIGKICKEFGVAFHTDAAQALGKIPVDV 241

Query: 795  DKMNISLMSLSGHKIYGPKGVGALYMKRRPRIRVEPQMNGGGQERGIRSGTVPTPLVVGM 974
            DK N+SLMSLSGHK+YGPKGVGALYM+RRPRIRVEPQMNGGGQERGIRSGT+PTPLVVGM
Sbjct: 242  DKWNVSLMSLSGHKVYGPKGVGALYMRRRPRIRVEPQMNGGGQERGIRSGTLPTPLVVGM 301

Query: 975  GAACELAMKEMEYDEKRIKGLHERLLNGIRSKIDGVVVNGSTERRYAGNLNISFAYVEGE 1154
            GAACE+A+KEMEYDEKRI  L +RLLNGIR K+DGVVVNGS ERRY GNLN+SFAYVEGE
Sbjct: 302  GAACEVALKEMEYDEKRISALQQRLLNGIRDKLDGVVVNGSMERRYVGNLNLSFAYVEGE 361

Query: 1155 SLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTEAEVDRAVE 1334
            SLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTE E+DRAV+
Sbjct: 362  SLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTEEEIDRAVQ 421

Query: 1335 LTVKQVEKLRDMSPLYEMVKEGIDIKNIQWSQH 1433
            LTV+QVEKLRDMSPLYEM+KEGI+IK+I+W QH
Sbjct: 422  LTVQQVEKLRDMSPLYEMMKEGINIKDIKWDQH 454


>ref|XP_002276621.1| PREDICTED: cysteine desulfurase 1, mitochondrial-like [Vitis
            vinifera]
          Length = 451

 Score =  746 bits (1926), Expect = 0.0
 Identities = 370/446 (82%), Positives = 411/446 (92%), Gaps = 4/446 (0%)
 Frame = +3

Query: 108  LNQLRTLTPL--ISKPFSTSAAAIATE--VEEEGGISMKGVKISGRPLYLDMQATSPVDP 275
            L  L+T +P   +    ST+ AA+A +   E+  GISMKGVKISGRPLYLD+QATSPVDP
Sbjct: 6    LQTLKTTSPTCRLLSHLSTATAAVAAKESYEDADGISMKGVKISGRPLYLDVQATSPVDP 65

Query: 276  RVLDCMLPYNISLYGNPHSRTHLYGWESDSAVEIARNQVASLVKASPKEIVFTSGATESN 455
            RVLD MLPY +S +GNPHSRTHLYGWES+ AVE AR QVA+L+ ASPKEIVFTSGATESN
Sbjct: 66   RVLDAMLPYYLSSFGNPHSRTHLYGWESELAVEKARAQVAALINASPKEIVFTSGATESN 125

Query: 456  NISVKGVMHFYREKKKHVITTQTEHKCVLDSCRHLQQEGFDVSYLPVGKDGILDLDLFRK 635
            NISVKGVMHFY++KK+HVITTQTEHKCVLDSCRHLQQEGF+V+YLPVG DGI+D+D  R 
Sbjct: 126  NISVKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVGSDGIVDIDQIRS 185

Query: 636  SIRPDTGLVSVMMVNNEIGVIQPMEEIGKICKEFGIPFHTDAAQALGKVPIDVDKMNISL 815
            +IRPDTGLVSVM VNNEIGVIQP+EEIGK+CKE G+PFHTDAAQALGK+PIDV+KMN+SL
Sbjct: 186  AIRPDTGLVSVMAVNNEIGVIQPIEEIGKMCKELGVPFHTDAAQALGKIPIDVEKMNVSL 245

Query: 816  MSLSGHKIYGPKGVGALYMKRRPRIRVEPQMNGGGQERGIRSGTVPTPLVVGMGAACELA 995
            MSLSGHKIYGPKGVGALYM+RRPRIRVEPQMNGGGQERGIRSGTVPTPLVVGMGAACELA
Sbjct: 246  MSLSGHKIYGPKGVGALYMRRRPRIRVEPQMNGGGQERGIRSGTVPTPLVVGMGAACELA 305

Query: 996  MKEMEYDEKRIKGLHERLLNGIRSKIDGVVVNGSTERRYAGNLNISFAYVEGESLLMGLK 1175
            MKEMEYD++RI  L +RLLNGI +K+DGVVVNGS ERRYAGNLN+SFAYVEGESLLMGLK
Sbjct: 306  MKEMEYDDERITALQKRLLNGINAKLDGVVVNGSRERRYAGNLNLSFAYVEGESLLMGLK 365

Query: 1176 EVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTEAEVDRAVELTVKQVE 1355
            EVAVSSGSACTSASLEPSYVLRALGV+EDMAHTSIRFGIGRFTT+AE+DRAVELTV+QVE
Sbjct: 366  EVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTDAEIDRAVELTVQQVE 425

Query: 1356 KLRDMSPLYEMVKEGIDIKNIQWSQH 1433
            KLR+MSPLYEMVKEGIDIK+IQW+QH
Sbjct: 426  KLREMSPLYEMVKEGIDIKSIQWAQH 451


>ref|XP_002310363.1| predicted protein [Populus trichocarpa] gi|222853266|gb|EEE90813.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  746 bits (1925), Expect = 0.0
 Identities = 372/453 (82%), Positives = 414/453 (91%), Gaps = 2/453 (0%)
 Frame = +3

Query: 81   SSSKLLITKLNQLRTLTPLIS-KPFSTSAA-AIATEVEEEGGISMKGVKISGRPLYLDMQ 254
            ++SKLL + L   RTLT   S + FST+AA A+A   E E  +++KGVKIS RPLYLDMQ
Sbjct: 2    ATSKLLASTLR--RTLTTSSSFRRFSTAAAEAVALASEPEDSMTIKGVKISSRPLYLDMQ 59

Query: 255  ATSPVDPRVLDCMLPYNISLYGNPHSRTHLYGWESDSAVEIARNQVASLVKASPKEIVFT 434
            ATSPVDPRVLD MLPY ++ YGNPHSRTHLYGWESD AVE AR+Q+A L+ ASPKEIVFT
Sbjct: 60   ATSPVDPRVLDAMLPYYLARYGNPHSRTHLYGWESDQAVETARSQIADLIGASPKEIVFT 119

Query: 435  SGATESNNISVKGVMHFYREKKKHVITTQTEHKCVLDSCRHLQQEGFDVSYLPVGKDGIL 614
            SGATESNNISVKGV+ FY+EKK+HV+TTQTEHKCVLDSCRHLQQEGF+V+YLPVG DGI+
Sbjct: 120  SGATESNNISVKGVIKFYKEKKRHVVTTQTEHKCVLDSCRHLQQEGFEVTYLPVGNDGIV 179

Query: 615  DLDLFRKSIRPDTGLVSVMMVNNEIGVIQPMEEIGKICKEFGIPFHTDAAQALGKVPIDV 794
            DL+  + SIRPDTGLVSVM VNNEIGVIQPMEEIG+ICKE  +PFHTDAAQALGK+PIDV
Sbjct: 180  DLEKLKGSIRPDTGLVSVMAVNNEIGVIQPMEEIGEICKELNVPFHTDAAQALGKIPIDV 239

Query: 795  DKMNISLMSLSGHKIYGPKGVGALYMKRRPRIRVEPQMNGGGQERGIRSGTVPTPLVVGM 974
            DK N+SLMSLSGHKIYGPKGVGALYM+RRPRIRVEPQMNGGGQERGIRSGTVPTPLVVGM
Sbjct: 240  DKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPQMNGGGQERGIRSGTVPTPLVVGM 299

Query: 975  GAACELAMKEMEYDEKRIKGLHERLLNGIRSKIDGVVVNGSTERRYAGNLNISFAYVEGE 1154
            GAACELA KEMEYD+KRI+ LHER+LNG+R+K+DGVVVNGS ERRYAGNLN+SFAYVEGE
Sbjct: 300  GAACELAKKEMEYDDKRIRALHERMLNGVRAKLDGVVVNGSVERRYAGNLNLSFAYVEGE 359

Query: 1155 SLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTEAEVDRAVE 1334
            SLLMGLK+VAVSSGSACTSASLEPSYVLRALGV+EDMAHTSIRFGIGRFTTE E+DRA+E
Sbjct: 360  SLLMGLKDVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEEEIDRAIE 419

Query: 1335 LTVKQVEKLRDMSPLYEMVKEGIDIKNIQWSQH 1433
            LTV+QVEKLR+MSPLYEMVKEGIDIK IQW+QH
Sbjct: 420  LTVQQVEKLREMSPLYEMVKEGIDIKQIQWAQH 452


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