BLASTX nr result

ID: Coptis21_contig00006363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006363
         (1274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307074.1| predicted protein [Populus trichocarpa] gi|2...   213   6e-53
ref|XP_003531342.1| PREDICTED: uncharacterized protein LOC100809...   190   6e-46
ref|XP_002269557.2| PREDICTED: uncharacterized protein LOC100244...   189   1e-45
gb|ABK26972.1| unknown [Picea sitchensis]                             187   4e-45
ref|XP_003525047.1| PREDICTED: uncharacterized protein LOC100790...   187   6e-45

>ref|XP_002307074.1| predicted protein [Populus trichocarpa] gi|222856523|gb|EEE94070.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  213 bits (543), Expect = 6e-53
 Identities = 127/222 (57%), Positives = 159/222 (71%), Gaps = 2/222 (0%)
 Frame = +2

Query: 242 IRVYNSNGSLQGQDGFEYKFNFDYFLSVAEVVCLIPSAIISIGCIVNWT--STQKLVQLN 415
           ++ Y S+ +++ Q     +FN D FLS+AE++C+I S+II+I   +N T   T  L  + 
Sbjct: 62  LKAYQSDPTIRTQ--VSNQFNLDQFLSIAELLCIISSSIITISYALNCTFSKTGALGVIG 119

Query: 416 SNNKILVWQIGLLVFAVFIGGVIRRRQWGRINRGGVSLNSSQGLGLSKLDLVGRIEKLEE 595
           SN     W + ++V  V IG  IRRRQW RI R        +G     L+LVGRIEKLE+
Sbjct: 120 SNTGF-AWGMVVMVSGVVIGAWIRRRQWWRICRE----TGREG----SLNLVGRIEKLEQ 170

Query: 596 DLRSSTTIIRMLSRQLEKLGIRFRVTRKSLKEPISEAAALALKNSEATQTLQMQENILEK 775
           D+RSS TIIR+LSRQLEKLGIRFRVTRK+LKEPI E AALA KNSEAT+ L +QENILEK
Sbjct: 171 DMRSSATIIRVLSRQLEKLGIRFRVTRKALKEPIVETAALAQKNSEATRALALQENILEK 230

Query: 776 ELGEMQKVLLAMQEQQHKQLELILAIGKAGKLRESKKESVVE 901
           ELGE QK+LLAMQEQQ KQLELILAIGK+GK  ++++E V E
Sbjct: 231 ELGETQKILLAMQEQQQKQLELILAIGKSGKSWDNRRERVEE 272


>ref|XP_003531342.1| PREDICTED: uncharacterized protein LOC100809936 [Glycine max]
          Length = 287

 Score =  190 bits (483), Expect = 6e-46
 Identities = 125/267 (46%), Positives = 157/267 (58%), Gaps = 9/267 (3%)
 Frame = +2

Query: 119 YFHSPPHILPNSLKPHLKFPQKITNSSKLKIESCPSR--QLLQIRVYNSNGSLQGQDGFE 292
           Y H  PH L +S   H  F      +  L      SR   L     +  N      D F 
Sbjct: 6   YHHPFPHSL-SSTSTHSLFTTNRNCNLSLSFSIVTSRPLHLTTHTAHRFNSLTVRADSFR 64

Query: 293 YKF-------NFDYFLSVAEVVCLIPSAIISIGCIVNWTSTQKLVQLNSNNKILVWQIGL 451
            +        NFD  LS+ E  CL+ SAI S    V   S  +L+      +   +   L
Sbjct: 65  LRSEHAAADSNFDSLLSLLEFSCLLSSAISSAAAAVLAGSKNELIA-GIGARAAPFGGAL 123

Query: 452 LVFAVFIGGVIRRRQWGRINRGGVSLNSSQGLGLSKLDLVGRIEKLEEDLRSSTTIIRML 631
           LV  V +G  IRRRQW R++          G G  +++L+ RIEKLEEDLRSS T++R+L
Sbjct: 124 LVVGVLVGAWIRRRQWRRVS-------VEAGKGGLEVNLLERIEKLEEDLRSSATVVRVL 176

Query: 632 SRQLEKLGIRFRVTRKSLKEPISEAAALALKNSEATQTLQMQENILEKELGEMQKVLLAM 811
           SRQLEKLG+RFRVTRK LK+PI+E AALA KNSEA + L +Q +ILEKELGE+Q+VLLAM
Sbjct: 177 SRQLEKLGVRFRVTRKGLKDPIAETAALAQKNSEAARALAVQSDILEKELGEIQQVLLAM 236

Query: 812 QEQQHKQLELILAIGKAGKLRESKKES 892
           QEQQ KQL+LILA+GKA KL ESK+E+
Sbjct: 237 QEQQRKQLDLILAVGKASKLWESKQET 263


>ref|XP_002269557.2| PREDICTED: uncharacterized protein LOC100244969 [Vitis vinifera]
          Length = 193

 Score =  189 bits (480), Expect = 1e-45
 Identities = 107/196 (54%), Positives = 139/196 (70%)
 Frame = +2

Query: 422  NKILVWQIGLLVFAVFIGGVIRRRQWGRINRGGVSLNSSQGLGLSKLDLVGRIEKLEEDL 601
            N+IL+WQ   LV  V +G  IRRRQW RI       N +   G+  ++LV R+EK+EED+
Sbjct: 6    NRILLWQAVALVGGVVVGSWIRRRQWWRI------FNDTAKPGIESVNLVERMEKMEEDI 59

Query: 602  RSSTTIIRMLSRQLEKLGIRFRVTRKSLKEPISEAAALALKNSEATQTLQMQENILEKEL 781
            RS  T+IR++SRQLEKLGIRFRVTRK+LK+PI+E A LA KNSEAT+ L +QE+ILEKEL
Sbjct: 60   RSMATLIRVMSRQLEKLGIRFRVTRKALKQPIAETAVLAQKNSEATRALAIQEDILEKEL 119

Query: 782  GEMQKVLLAMQEQQHKQLELILAIGKAGKLRESKKESVVEGTAQPLNSVAGSKEGRQMEG 961
            GE+QKVLLAMQEQQ KQL+LILAIGKAGKL E+++    E  A  + +   ++ G+    
Sbjct: 120  GEIQKVLLAMQEQQQKQLDLILAIGKAGKLWENRRGQSEEQDA--IEACDSAEVGQMKAH 177

Query: 962  QPKTGVRQRIVNSESA 1009
            Q     RQ+  N++ A
Sbjct: 178  QIPAAARQKGSNNDRA 193


>gb|ABK26972.1| unknown [Picea sitchensis]
          Length = 379

 Score =  187 bits (476), Expect = 4e-45
 Identities = 112/223 (50%), Positives = 150/223 (67%), Gaps = 11/223 (4%)
 Frame = +2

Query: 308 DYFLSVAEVVCLIPSAIISIGCIV----------NWTSTQKLVQLNSNNKILVWQIGLLV 457
           D  L++AEV C+ PS ++S+G  V          NW S+   V +   N    WQI  L+
Sbjct: 83  DRLLAIAEVACIAPSLVLSVGFAVQSVIHKSQNVNWVSSTATV-IKFANVYCTWQILPLL 141

Query: 458 FAVFIGGVIRRRQWGRINRGGVSLNS-SQGLGLSKLDLVGRIEKLEEDLRSSTTIIRMLS 634
            A+ I  +IR RQW R+   G   ++ S+G   S+  L+ RI+KLEED+ SS TIIR+LS
Sbjct: 142 GALIISAIIRTRQWERLTAVGPKDHANSEG---SEFSLIHRIKKLEEDVGSSVTIIRVLS 198

Query: 635 RQLEKLGIRFRVTRKSLKEPISEAAALALKNSEATQTLQMQENILEKELGEMQKVLLAMQ 814
           RQLEKLG+RFRVTR++L++PI+E AALA K SEA + L++QE++LEKEL  +Q VLLAMQ
Sbjct: 199 RQLEKLGVRFRVTRQTLRDPINETAALAQKTSEAIRVLELQEDVLEKELRGIQHVLLAMQ 258

Query: 815 EQQHKQLELILAIGKAGKLRESKKESVVEGTAQPLNSVAGSKE 943
           EQQ KQLELILA+GKAG+L +    S VE T +P NS   S++
Sbjct: 259 EQQQKQLELILALGKAGRLHKGAAYS-VESTKKPHNSGVSSRK 300


>ref|XP_003525047.1| PREDICTED: uncharacterized protein LOC100790782 [Glycine max]
          Length = 293

 Score =  187 bits (474), Expect = 6e-45
 Identities = 110/201 (54%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
 Frame = +2

Query: 302 NFDYFLSVAEVVCLIPSAIISIGCIVNWTSTQKLVQLNSNNKILVWQIGLLVFAVFIGGV 481
           NFD  LS+ E  CL+ SA+ S    V   S  +L+ +    +   +   LLV  V +G  
Sbjct: 81  NFDSLLSLLEFSCLLSSAVASAAAAVVAGSKNELL-VGIGTRAAPFGGALLVVGVLVGAW 139

Query: 482 IRRRQWGRI----NRGGVSLNSSQGLGLSKLDLVGRIEKLEEDLRSSTTIIRMLSRQLEK 649
           IRRRQW R      +GG+ +N           L+ RIEKLEED+RSS T++R+LSRQLEK
Sbjct: 140 IRRRQWRRACVETGKGGLEVN-----------LLERIEKLEEDMRSSATVVRVLSRQLEK 188

Query: 650 LGIRFRVTRKSLKEPISEAAALALKNSEATQTLQMQENILEKELGEMQKVLLAMQEQQHK 829
           LG+RFRVTRK+LK+PI+E AALA KNSEA + L +Q +ILEKELGE+Q+VLLAMQEQQ K
Sbjct: 189 LGVRFRVTRKALKDPIAETAALAQKNSEAARALAVQSDILEKELGEIQQVLLAMQEQQRK 248

Query: 830 QLELILAIGKAGKLRESKKES 892
           QL+LILAIGKA KL ESK E+
Sbjct: 249 QLDLILAIGKASKLWESKHET 269


Top