BLASTX nr result

ID: Coptis21_contig00006318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006318
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279364.1| PREDICTED: uncharacterized protein LOC100247...   107   5e-21
ref|XP_002266955.1| PREDICTED: uncharacterized protein LOC100252...   106   1e-20
emb|CAN73618.1| hypothetical protein VITISV_004114 [Vitis vinifera]   106   1e-20
ref|XP_002321314.1| predicted protein [Populus trichocarpa] gi|2...   104   4e-20
ref|XP_002512423.1| chloroplast-targeted copper chaperone, putat...    99   2e-18

>ref|XP_002279364.1| PREDICTED: uncharacterized protein LOC100247751 [Vitis vinifera]
          Length = 350

 Score =  107 bits (268), Expect = 5e-21
 Identities = 106/382 (27%), Positives = 144/382 (37%), Gaps = 31/382 (8%)
 Frame = -3

Query: 1202 MASTPTLSKPTEEGSEPLKYQTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKRKVK 1023
            MA+     +  EE  EPLKY+TW                               CK+KVK
Sbjct: 1    MATQGEAKEVVEEALEPLKYKTWVLKVSIHCEG---------------------CKKKVK 39

Query: 1022 KVLTSVEGVYNVAIDSQQHKVTVTGNVDGDALVKKLVKTGKHAELWPEKAETXXXXXXXX 843
            K+L +++GVY   ID++Q KV VTGNVD + L+KKLVK GKHAELWPEKA+         
Sbjct: 40   KILQNIDGVYTTEIDTRQQKVCVTGNVDVETLLKKLVKNGKHAELWPEKAD----HQKEK 95

Query: 842  XXXXKETTNDSKSSEESRVEDHQKK----------------ETEHVEIXXXXXXXXXXXX 711
                KE   D +S+E+    D  K+                E +H E             
Sbjct: 96   KSKNKEKQKDQESNEQEGGHDGDKEKSTVKFEAVQEPTKNPEPKHSEAAAASGSGGGGGG 155

Query: 710  XXXXXXXXXXSVKDSGNSQTEESKPDGKLTENVSTNVGQSQTSVPXXXXXXXXXXXXXXX 531
                      +   +G +  +E+KP+ K  E  ++  G++    P               
Sbjct: 156  GGGAKVGENGAAVKNGAAAQKEAKPEVKKPE--ASPAGEA----PPAAEKKVGESDACAD 209

Query: 530  XXXXXXXXXNVPEGGEGSNDTVESNVSFTPNGPAILSFNLSPPRQHG---------YQYP 378
                        + G+  N  V +  S TP  P   S N SP   HG         Y YP
Sbjct: 210  KGGSGNGSKKKKKKGQKPNSDVGAPSSDTPAAPP-GSPNPSPAPSHGPAPASTQTVYHYP 268

Query: 377  T--YGPP-PVYAV--XXXXXXXXXXXXXXXXXXXXXXXXXTDPQSYGQPVDS-YEMHHQS 216
               Y PP P Y V                             P  + +P  S ++ +  S
Sbjct: 269  PHYYAPPQPAYTVSYNTMHPSTSHEASYYATPPPQYSYAYMHPGPWTEPPPSDFDSNPSS 328

Query: 215  YPPQSDSFEIFSDENANGCFIM 150
              P SDSF+ FSDEN N C +M
Sbjct: 329  VHPPSDSFQFFSDENPNACSLM 350


>ref|XP_002266955.1| PREDICTED: uncharacterized protein LOC100252094 [Vitis vinifera]
            gi|297743851|emb|CBI36821.3| unnamed protein product
            [Vitis vinifera]
          Length = 268

 Score =  106 bits (265), Expect = 1e-20
 Identities = 60/144 (41%), Positives = 75/144 (52%)
 Frame = -3

Query: 1181 SKPTEEGSEPLKYQTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKRKVKKVLTSVE 1002
            + P ++  +PLKYQTW                               CK+KVKKVL S++
Sbjct: 3    TSPAQDPPQPLKYQTWVLKVSIHCEG---------------------CKKKVKKVLHSID 41

Query: 1001 GVYNVAIDSQQHKVTVTGNVDGDALVKKLVKTGKHAELWPEKAETXXXXXXXXXXXXKET 822
            GVY   IDSQQHKVTVTGNVD + L+KKLVKTGKHA+LWPEK +             K+ 
Sbjct: 42   GVYTTVIDSQQHKVTVTGNVDAETLIKKLVKTGKHADLWPEKPDNKENSPGKSKNKKKQ- 100

Query: 821  TNDSKSSEESRVEDHQKKETEHVE 750
             ND+K S +   E  QK   +  E
Sbjct: 101  -NDAKDSNKGNGEGDQKNSADKPE 123


>emb|CAN73618.1| hypothetical protein VITISV_004114 [Vitis vinifera]
          Length = 350

 Score =  106 bits (264), Expect = 1e-20
 Identities = 106/382 (27%), Positives = 144/382 (37%), Gaps = 31/382 (8%)
 Frame = -3

Query: 1202 MASTPTLSKPTEEGSEPLKYQTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKRKVK 1023
            MA+     +  EE  EPLKY+TW                               CK+KVK
Sbjct: 1    MATQGEAKEVVEEALEPLKYKTWVLKVSIHCEG---------------------CKKKVK 39

Query: 1022 KVLTSVEGVYNVAIDSQQHKVTVTGNVDGDALVKKLVKTGKHAELWPEKAETXXXXXXXX 843
            K+L +++GVY   ID++Q KV VTGNVD + L+KKLVK GKHAELWPEKA+         
Sbjct: 40   KILQNIDGVYTTEIDTRQQKVCVTGNVDVETLLKKLVKNGKHAELWPEKAD----HQKEK 95

Query: 842  XXXXKETTNDSKSSE----------------ESRVEDHQKKETEHVEIXXXXXXXXXXXX 711
                KE   D +S+E                E+  E  +  E +H E             
Sbjct: 96   KSKNKEKQKDQESNEQEGGHGGDKEKSTVKFEAVQEPTKNPEPKHSEAAAASGSGGGGGG 155

Query: 710  XXXXXXXXXXSVKDSGNSQTEESKPDGKLTENVSTNVGQSQTSVPXXXXXXXXXXXXXXX 531
                      +   +G +  +E+KP+ K  E  ++  G++    P               
Sbjct: 156  GGGTKVGENGAAVKNGAAAQKEAKPEVKKPE--ASPAGEA----PPAAEKKVGESDACAD 209

Query: 530  XXXXXXXXXNVPEGGEGSNDTVESNVSFTPNGPAILSFNLSPPRQHG---------YQYP 378
                        + G+  N  V +  S TP  P   S N SP   HG         Y YP
Sbjct: 210  KGGSGNGSKKKKKKGQKPNSDVGAPSSDTPAAPP-GSPNPSPAPSHGPAPASTQTVYHYP 268

Query: 377  T--YGPP-PVYAV--XXXXXXXXXXXXXXXXXXXXXXXXXTDPQSYGQPVDS-YEMHHQS 216
               Y PP P Y V                             P  + +P  S ++ +  S
Sbjct: 269  PHYYAPPQPAYTVSYNTMHPSTSHGASYYATPPPQYSYAYMHPGPWTEPPPSDFDSNPSS 328

Query: 215  YPPQSDSFEIFSDENANGCFIM 150
              P SDSF+ FSDEN N C +M
Sbjct: 329  VHPPSDSFQFFSDENPNACSLM 350


>ref|XP_002321314.1| predicted protein [Populus trichocarpa] gi|222862087|gb|EEE99629.1|
            predicted protein [Populus trichocarpa]
          Length = 292

 Score =  104 bits (260), Expect = 4e-20
 Identities = 91/352 (25%), Positives = 132/352 (37%), Gaps = 8/352 (2%)
 Frame = -3

Query: 1181 SKPTEEGSEPLKYQTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKRKVKKVLTSVE 1002
            +KP EE  E LKYQTW                               CK+KVKKVL S++
Sbjct: 3    TKPAEEALEQLKYQTWVLKVSIHCEG---------------------CKKKVKKVLQSID 41

Query: 1001 GVYNVAIDSQQHKVTVTGNVDGDALVKKLVKTGKHAELWPEKAETXXXXXXXXXXXXKET 822
            GVY   +DS QHKVTVTGNVD   L+KKL+++GK+AELWP+ +E                
Sbjct: 42   GVYKTEVDSHQHKVTVTGNVDAQILIKKLMRSGKYAELWPKNSE---------------- 85

Query: 821  TNDSKSSEESRVEDHQKKETEHVEIXXXXXXXXXXXXXXXXXXXXXXSVKDSGNSQTEES 642
             N  K+S +S+  D QK   +  E+                         + G+ Q   +
Sbjct: 86   -NKEKTSGKSQNNDKQKSPKDVQEVGGGDDHQKNTPAEKPETEAKIGG-GNGGDDQNSGA 143

Query: 641  KPDGKLTENVSTNVGQSQTSVPXXXXXXXXXXXXXXXXXXXXXXXXNVPEGGEGSNDTVE 462
            + D    E+ S     +                              VP       DT  
Sbjct: 144  ESDDGGLESASPVAAAASGGGSGKKKKKKKKPSGNSNNGASGDNSGGVPA------DTGS 197

Query: 461  SNVSFTPNGPAILSFNLSPPRQHGYQYPT--YGPPPVYAVXXXXXXXXXXXXXXXXXXXX 288
            S+++   + P++   + SPP QH Y YP   + P PVY +                    
Sbjct: 198  SSMADLDSAPSMSLMSHSPPHQHVYPYPPMYHQPIPVYGI-----------------NYN 240

Query: 287  XXXXXTDPQSYGQPVDS-----YEMHHQSYPPQSDSFEIFS-DENANGCFIM 150
                      Y  P+ +     ++  +Q   P SD  + F+ D+N  GC +M
Sbjct: 241  TAYCSASESCYAHPMHAQIHYHHQQRYQPPAPPSDLIKEFNDDDNETGCSVM 292


>ref|XP_002512423.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]
            gi|223548384|gb|EEF49875.1| chloroplast-targeted copper
            chaperone, putative [Ricinus communis]
          Length = 384

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 64/157 (40%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
 Frame = -3

Query: 1187 TLSKPTEEGSE----------PLKYQTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC 1038
            T  KPTE   E          PLKY+TW                               C
Sbjct: 11   TEPKPTETNKETVAAEENQEPPLKYKTWVLKVSIHCEG---------------------C 49

Query: 1037 KRKVKKVLTSVEGVYNVAIDSQQHKVTVTGNVDGDALVKKLVKTGKHAELWPEKAETXXX 858
            KRKVKK+LT+++GVY   ID +Q KVTV GNVDG  L+KKLVK GKHAELWPEKA++   
Sbjct: 50   KRKVKKILTNIDGVYATEIDLRQQKVTVIGNVDGGTLIKKLVKAGKHAELWPEKADSKEK 109

Query: 857  XXXXXXXXXKE-TTNDSKSSEESRVEDHQKKETEHVE 750
                     K+    D +S +ES  E   KKE E V+
Sbjct: 110  KKGKSKNKNKDKKEKDKQSDQESGEEGGDKKEKETVK 146


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