BLASTX nr result

ID: Coptis21_contig00006287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006287
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531252.1| conserved hypothetical protein [Ricinus comm...   165   1e-38
ref|XP_002310566.1| predicted protein [Populus trichocarpa] gi|2...   162   1e-37
emb|CAN82837.1| hypothetical protein VITISV_030872 [Vitis vinifera]   154   3e-35
ref|XP_002307089.1| predicted protein [Populus trichocarpa] gi|2...   151   2e-34
ref|XP_003601959.1| hypothetical protein MTR_3g087280 [Medicago ...   109   7e-22

>ref|XP_002531252.1| conserved hypothetical protein [Ricinus communis]
           gi|223529137|gb|EEF31116.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 198

 Score =  165 bits (418), Expect = 1e-38
 Identities = 83/182 (45%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
 Frame = +3

Query: 147 ASQNLSPLICELKVIRAKNLEFVSTGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWNES 326
           A+Q+LS   CE+ +++AKNLE  S GNLF+RY+L +G++KRI++  QE+ S  DL+WNE 
Sbjct: 4   ATQSLS---CEISIVQAKNLELKSHGNLFVRYYLSSGHNKRIQINTQEISSKSDLFWNEF 60

Query: 327 TTLECLGAEDTMDKLKQQSVVFELRWRKPSTMFGKFGAGSKLLFRKEIAWKDVLNSTNLS 506
            +LECLG +D+++ LKQ+SVVFELRWR   ++ GK G GS+LL R +I WK VL S  + 
Sbjct: 61  FSLECLGTQDSINNLKQESVVFELRWRNTKSILGKIG-GSQLLGRAKIPWKTVLESPKME 119

Query: 507 IEKWI--TSAKTSKFVPEGLKPPALQISMNIQDPRTLKTPKRTHAVRSINGNVCG-CKNG 677
           IEKW+   S K    + + +KPP++QI++ ++ P  +   KR   +R    + CG CK+ 
Sbjct: 120 IEKWVMMVSKKNCSVLADDVKPPSVQIALRVRVPEMVAMEKRNGKLRKWENDDCGCCKDS 179

Query: 678 EC 683
            C
Sbjct: 180 GC 181


>ref|XP_002310566.1| predicted protein [Populus trichocarpa] gi|222853469|gb|EEE91016.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  162 bits (409), Expect = 1e-37
 Identities = 80/174 (45%), Positives = 119/174 (68%), Gaps = 2/174 (1%)
 Frame = +3

Query: 168 LICELKVIRAKNLEFVSTGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWNESTTLECLG 347
           L CE+++++AKN+EF S G+LF+RY+L TGN KRI+L ++E+ +  +L+WNES +LEC G
Sbjct: 4   LSCEIEILQAKNVEFKSHGSLFVRYYLSTGNSKRIQLNSREISAKANLFWNESFSLECSG 63

Query: 348 AEDTMDKLKQQSVVFELRWRKPSTMFGKFGAGSKLLFRKEIAWKDVLNSTNLSIEKWITS 527
            ED+++ LKQQ+VVFELRWR  + + GK G GS+LL R E+ WK V+ S  L +E+W+T 
Sbjct: 64  TEDSINNLKQQTVVFELRWRSTNPILGKIG-GSQLLGRAEVPWKTVVESPKLEMERWVTM 122

Query: 528 AKTSKFVPEGLKPPALQISMNIQDPRTLK-TPKRTHAVRSINGNVCG-CKNGEC 683
                 VP+ +KPPA+QI+M ++ P   +   K+    R    + CG CK+  C
Sbjct: 123 IPKKGSVPDDVKPPAVQIAMRVRVPAMAEMQEKKRRNGRLKRWDECGCCKDSGC 176


>emb|CAN82837.1| hypothetical protein VITISV_030872 [Vitis vinifera]
          Length = 194

 Score =  154 bits (388), Expect = 3e-35
 Identities = 77/182 (42%), Positives = 118/182 (64%), Gaps = 1/182 (0%)
 Frame = +3

Query: 141 MGASQNLSPLICELKVIRAKNLEFVSTGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWN 320
           MGASQ LS L CE++++RAKN+E  + G LF+RY+L  GN++R+ L ++E+ S  DL+W+
Sbjct: 1   MGASQCLSSLSCEIRIMRAKNIELKTEGKLFVRYYLSAGNNQRVGLNSREISSKSDLFWD 60

Query: 321 ESTTLECLGAEDTMDKLKQQSVVFELRWRKPSTMFGKFGAGSKLLFRKEIAWKDVLNSTN 500
           ES +LECLG+E+++  L Q+ VVFELRWR    + G+    S +L R EI W  V  S  
Sbjct: 61  ESFSLECLGSEESIQSLMQERVVFELRWRSKVPVLGRV-RKSHVLGRVEIPWTSVFASKE 119

Query: 501 LSIEKWITSAKT-SKFVPEGLKPPALQISMNIQDPRTLKTPKRTHAVRSINGNVCGCKNG 677
           + IEKW++   T S+ V +  +PPALQ++M ++ P+  +  +R      +  + CGC +G
Sbjct: 120 MEIEKWVSMVSTGSRVVDQDGQPPALQVAMKVRIPKVAERSRRV-----MKWDECGCTDG 174

Query: 678 EC 683
            C
Sbjct: 175 GC 176


>ref|XP_002307089.1| predicted protein [Populus trichocarpa] gi|222856538|gb|EEE94085.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  151 bits (382), Expect = 2e-34
 Identities = 76/172 (44%), Positives = 114/172 (66%), Gaps = 3/172 (1%)
 Frame = +3

Query: 177 ELKVIRAKNLEFVSTGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWNESTTLECLGAED 356
           E+++ +AKN+E  S G+LF+RY+L  G +KRI+LK++E+ S  +L+WNES +LEC+G ED
Sbjct: 16  EIEIFQAKNIEVKSHGSLFVRYYLSAGKNKRIQLKSREISSKSNLFWNESFSLECIGTED 75

Query: 357 TMDKLKQQSVVFELRWRKPSTMFGKFGAGSKLLFRKEIAWKDVLNSTNLSIEKWITSAKT 536
           +++ LKQ++VVFELRWR  + +  K G GS+LL R E+ WK VL S NL +E W+     
Sbjct: 76  SINNLKQETVVFELRWRNTNPILAKIG-GSQLLGRAEVPWKTVLESPNLEMESWVMMVPK 134

Query: 537 SKFVPEGLKPPALQISMNIQDPRTL---KTPKRTHAVRSINGNVCGCKNGEC 683
              VP+ +KPP++QI+M  + P      K  +R   +R  +G  C CK+  C
Sbjct: 135 KGSVPDDVKPPSVQIAMRARVPEMAEMEKKNRRDGRLRKRDGCGC-CKDSGC 185


>ref|XP_003601959.1| hypothetical protein MTR_3g087280 [Medicago truncatula]
           gi|355491007|gb|AES72210.1| hypothetical protein
           MTR_3g087280 [Medicago truncatula]
          Length = 392

 Score =  109 bits (273), Expect = 7e-22
 Identities = 64/171 (37%), Positives = 102/171 (59%), Gaps = 3/171 (1%)
 Frame = +3

Query: 174 CELKVIRAKNLEFV-STGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWNESTTLECLGA 350
           CEL++I+A+N+EF+ ST NLF R +L TGNDKRI+L ++ V +    +W+ES  L+C   
Sbjct: 14  CELRIIQARNIEFIKSTKNLFARLYLPTGNDKRIQLNSKSVSTKSVPFWDESFNLDCSCP 73

Query: 351 EDTMDKLKQQSVVFELRWRKPSTMFGKFGAGSKLLFRKEIAWKDVLNSTNLSIEKWITSA 530
           ++ ++ L QQS+V ELR RK          GS+L+ + +I WK +L + N+ ++KW+   
Sbjct: 74  QEFLENLNQQSLVLELRQRKI--------WGSQLIGKGDIPWKVILEAQNMELKKWLKMD 125

Query: 531 KTS-KFVPEGL-KPPALQISMNIQDPRTLKTPKRTHAVRSINGNVCGCKNG 677
             S     EG+   P +++ + I+    ++  K+    R  N N CGCKNG
Sbjct: 126 LVSGSECKEGMFSTPEVEVEIKIRVASVVEMEKQNKR-RLNNWNECGCKNG 175



 Score =  105 bits (261), Expect = 2e-20
 Identities = 64/171 (37%), Positives = 100/171 (58%), Gaps = 3/171 (1%)
 Frame = +3

Query: 174 CELKVIRAKNLEFV-STGNLFLRYHLLTGNDKRIRLKNQEVPSTCDLYWNESTTLECLGA 350
           CEL++I+A+N+E V ST NLF R +L TGN+KRI+L ++ V +    +W+ES  L+C   
Sbjct: 207 CELRIIQARNVESVKSTKNLFARLYLPTGNNKRIQLNSKSVSTKSVPFWDESFNLDCSCP 266

Query: 351 EDTMDKLKQQSVVFELRWRKPSTMFGKFGAGSKLLFRKEIAWKDVLNSTNLSIEKWITSA 530
           ++ ++ L QQS+  ELR RK          GS+L+ + EI WK +L S N+ ++KW+   
Sbjct: 267 QEFLENLNQQSLEVELRQRKM--------WGSQLIGKGEIPWKVILESQNMELKKWLKMD 318

Query: 531 KTSKF-VPEGLKP-PALQISMNIQDPRTLKTPKRTHAVRSINGNVCGCKNG 677
             S+    E + P P +++ + I+     +  K+    R  N N CGCKNG
Sbjct: 319 LVSRSDCKEAMFPTPEVEVEIKIRVASVAEMEKKNKR-RLNNWNECGCKNG 368


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