BLASTX nr result

ID: Coptis21_contig00006261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006261
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280752.1| PREDICTED: uncharacterized protein LOC100254...   232   3e-59
emb|CBI33900.3| unnamed protein product [Vitis vinifera]              232   3e-59
ref|XP_003608634.1| hypothetical protein MTR_4g098640 [Medicago ...   224   5e-57
gb|AFK37095.1| unknown [Medicago truncatula]                          223   1e-56
ref|XP_002519844.1| conserved hypothetical protein [Ricinus comm...   221   5e-56

>ref|XP_002280752.1| PREDICTED: uncharacterized protein LOC100254109 [Vitis vinifera]
          Length = 231

 Score =  232 bits (592), Expect = 3e-59
 Identities = 115/178 (64%), Positives = 140/178 (78%), Gaps = 1/178 (0%)
 Frame = +3

Query: 21  ITVKTIGPTRPCSLKVPSLISVRDLRNLTAEVSHLPVEHLKLILRGEVLYDTNNGDDVHL 200
           IT+KTIGP+ P  L+VPS I+V DLR L A   HLP+E+L+LILRG VL+DT +GDDV L
Sbjct: 23  ITLKTIGPSPPFRLRVPSPITVHDLRKLVASNGHLPIENLRLILRGNVLHDTKDGDDVSL 82

Query: 201 RLEDRDSIIVAVKPKSPAQLSQDGFXXXXXXX-LKFQIPQSTSRWKRKIFSFLHDKLKLP 377
           +L D DS+IVAVKPK P +  +DGF        LKFQ+PQSTSRWKRK+F FLHDKLKLP
Sbjct: 83  QLNDGDSLIVAVKPKPPPKQVRDGFEDEDDDDNLKFQLPQSTSRWKRKLFCFLHDKLKLP 142

Query: 378 YILLTVIFSISLRAWALIILWFMLAPVAYRCDLGPLYILGTGFCIILFNLGKREDGEL 551
            I+L  IFS+SL+ W LI+ WF+LAPVA+R DLGPLYILGTGFCII  NLG+R+ G++
Sbjct: 143 DIILMAIFSLSLKMWVLIVTWFILAPVAHRWDLGPLYILGTGFCIIFVNLGQRKHGDI 200


>emb|CBI33900.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score =  232 bits (592), Expect = 3e-59
 Identities = 115/178 (64%), Positives = 140/178 (78%), Gaps = 1/178 (0%)
 Frame = +3

Query: 21  ITVKTIGPTRPCSLKVPSLISVRDLRNLTAEVSHLPVEHLKLILRGEVLYDTNNGDDVHL 200
           IT+KTIGP+ P  L+VPS I+V DLR L A   HLP+E+L+LILRG VL+DT +GDDV L
Sbjct: 4   ITLKTIGPSPPFRLRVPSPITVHDLRKLVASNGHLPIENLRLILRGNVLHDTKDGDDVSL 63

Query: 201 RLEDRDSIIVAVKPKSPAQLSQDGFXXXXXXX-LKFQIPQSTSRWKRKIFSFLHDKLKLP 377
           +L D DS+IVAVKPK P +  +DGF        LKFQ+PQSTSRWKRK+F FLHDKLKLP
Sbjct: 64  QLNDGDSLIVAVKPKPPPKQVRDGFEDEDDDDNLKFQLPQSTSRWKRKLFCFLHDKLKLP 123

Query: 378 YILLTVIFSISLRAWALIILWFMLAPVAYRCDLGPLYILGTGFCIILFNLGKREDGEL 551
            I+L  IFS+SL+ W LI+ WF+LAPVA+R DLGPLYILGTGFCII  NLG+R+ G++
Sbjct: 124 DIILMAIFSLSLKMWVLIVTWFILAPVAHRWDLGPLYILGTGFCIIFVNLGQRKHGDI 181


>ref|XP_003608634.1| hypothetical protein MTR_4g098640 [Medicago truncatula]
           gi|355509689|gb|AES90831.1| hypothetical protein
           MTR_4g098640 [Medicago truncatula]
          Length = 221

 Score =  224 bits (572), Expect = 5e-57
 Identities = 111/176 (63%), Positives = 135/176 (76%)
 Frame = +3

Query: 21  ITVKTIGPTRPCSLKVPSLISVRDLRNLTAEVSHLPVEHLKLILRGEVLYDTNNGDDVHL 200
           I +KTIGP  P  L+VPS I VRDLR L A   HLP+++L LILRG  L D  NGDDV +
Sbjct: 16  IVLKTIGPAPPSRLRVPSSIKVRDLRRLIASNGHLPIDNLSLILRGTALCDLKNGDDVRM 75

Query: 201 RLEDRDSIIVAVKPKSPAQLSQDGFXXXXXXXLKFQIPQSTSRWKRKIFSFLHDKLKLPY 380
           +L D DS+IVAVKPK P +   D         LKFQ+PQS+SRWK+K++SFLHDKLKLP 
Sbjct: 76  QLNDGDSLIVAVKPKPPVKDGHDN--DDDDEDLKFQLPQSSSRWKKKLYSFLHDKLKLPD 133

Query: 381 ILLTVIFSISLRAWALIILWFMLAPVAYRCDLGPLYILGTGFCIILFNLGKREDGE 548
           I+L VIF++SL+AW LII+WF+LAPVA+R DLGPLYIL TGFC+ILFNLGKR+ G+
Sbjct: 134 IILMVIFTLSLKAWVLIIMWFILAPVAHRWDLGPLYILATGFCLILFNLGKRKAGD 189


>gb|AFK37095.1| unknown [Medicago truncatula]
          Length = 221

 Score =  223 bits (569), Expect = 1e-56
 Identities = 110/176 (62%), Positives = 135/176 (76%)
 Frame = +3

Query: 21  ITVKTIGPTRPCSLKVPSLISVRDLRNLTAEVSHLPVEHLKLILRGEVLYDTNNGDDVHL 200
           I +KTIGP  P  L+VPS I VRDLR L A   HLP+++L LILRG  L D  NGDDV +
Sbjct: 16  IVLKTIGPAPPSRLRVPSSIKVRDLRRLIASNGHLPIDNLSLILRGTALCDLKNGDDVRM 75

Query: 201 RLEDRDSIIVAVKPKSPAQLSQDGFXXXXXXXLKFQIPQSTSRWKRKIFSFLHDKLKLPY 380
           +L D DS+IVAVKPK P +   D         LKFQ+PQS+SRWK+K++SFLHD+LKLP 
Sbjct: 76  QLNDGDSLIVAVKPKPPVKDGHDN--DDDDEDLKFQLPQSSSRWKKKLYSFLHDRLKLPD 133

Query: 381 ILLTVIFSISLRAWALIILWFMLAPVAYRCDLGPLYILGTGFCIILFNLGKREDGE 548
           I+L VIF++SL+AW LII+WF+LAPVA+R DLGPLYIL TGFC+ILFNLGKR+ G+
Sbjct: 134 IILMVIFTLSLKAWVLIIMWFILAPVAHRWDLGPLYILATGFCLILFNLGKRKAGD 189


>ref|XP_002519844.1| conserved hypothetical protein [Ricinus communis]
           gi|223540890|gb|EEF42448.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  221 bits (564), Expect = 5e-56
 Identities = 111/177 (62%), Positives = 139/177 (78%)
 Frame = +3

Query: 21  ITVKTIGPTRPCSLKVPSLISVRDLRNLTAEVSHLPVEHLKLILRGEVLYDTNNGDDVHL 200
           IT+KTIGP+    L VPS I VRDLR L AE  HLP+++L+LILRG VL D+ + DD ++
Sbjct: 24  ITLKTIGPSPSSRLLVPSPIKVRDLRKLIAEDHHLPIQNLRLILRGNVLQDSKHDDDAYI 83

Query: 201 RLEDRDSIIVAVKPKSPAQLSQDGFXXXXXXXLKFQIPQSTSRWKRKIFSFLHDKLKLPY 380
           +L + DS+IVAVKPK PA+   DGF       LKFQ+PQSTSRWKR+I+SFLHDKLK+  
Sbjct: 84  KLSNSDSLIVAVKPKPPAKHLHDGFDFDDDD-LKFQLPQSTSRWKRRIYSFLHDKLKISD 142

Query: 381 ILLTVIFSISLRAWALIILWFMLAPVAYRCDLGPLYILGTGFCIILFNLGKREDGEL 551
           ILL  +FS+SL+AWA+I+LWF LAPVA+R DLGPLY+LGTGF II FNLG+R+ G+L
Sbjct: 143 ILLMALFSLSLKAWAVIVLWFGLAPVAHRWDLGPLYMLGTGFSIIFFNLGRRQAGDL 199


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