BLASTX nr result

ID: Coptis21_contig00006243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006243
         (1656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN69082.1| squalene synthase [Diospyros kaki]                     672   0.0  
ref|NP_001236365.1| squalene synthase [Glycine max] gi|2463569|d...   671   0.0  
gb|ADD54645.1| squalene synthase [Bruguiera gymnorhiza]               671   0.0  
ref|XP_003537842.1| PREDICTED: squalene synthase-like [Glycine max]   668   0.0  
gb|ACU21003.1| unknown [Glycine max]                                  668   0.0  

>gb|ACN69082.1| squalene synthase [Diospyros kaki]
          Length = 415

 Score =  672 bits (1734), Expect = 0.0
 Identities = 321/389 (82%), Positives = 364/389 (93%)
 Frame = -3

Query: 1615 MGILGAMVKYPDEIYPLLKLKMAQKHAAKQIPPQPHWAFCYSMLHKVSRSFAFVIQQLHP 1436
            MG L AM+++PD++YPL+KLKMA +HA KQIPP+PHWAFCY+MLHKVSRSF  VIQQL  
Sbjct: 1    MGSLAAMLRHPDDVYPLVKLKMAARHAEKQIPPEPHWAFCYTMLHKVSRSFGLVIQQLGT 60

Query: 1435 ELRNAVCIFYLVLRALDTVEDDTSIASDVKVPILEAFHRHIYDPNWHFACGTKEYKILMD 1256
            ELRNAVCIFYLVLRALDTVEDDTSIA++VKVPIL AFH HIYD +WHF+CGT+EYK+LMD
Sbjct: 61   ELRNAVCIFYLVLRALDTVEDDTSIATEVKVPILLAFHHHIYDRDWHFSCGTREYKVLMD 120

Query: 1255 ELHHVVTAFLELGKGYQEAIEEITKRMGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGL 1076
            E HHV TAFLELGKGYQEAIE+IT RMGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGL
Sbjct: 121  EFHHVSTAFLELGKGYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 1075 SKLFYASNLEDLIPDSLSNSMGLYLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVDKL 896
            SKLF+AS LEDL PDSLSNSMGL+LQKTNIIRDYLEDINEIPKSRMFWPR+IWSKYV+KL
Sbjct: 181  SKLFHASGLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240

Query: 895  EDLKYEENSVQAVQCLNDMVTNALLHVEDCLKYMSALRDPSIFRFCAIPQIMAIGTLALC 716
            EDLKYE+NSV++VQCLNDMVTNAL+HV+DCLKYMSALRDP+IFRFCAIPQIMAIGTLALC
Sbjct: 241  EDLKYEKNSVKSVQCLNDMVTNALIHVDDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC 300

Query: 715  YNNIAVFRGVVKMRRGLTAKLIDGTRSMSDVYGAFYDFSSILKSKVEKNDPNATKTLSRI 536
            YNNI VFRGVVKMRRGLTAK+ID T+++SDVYGAF+DFS +LKSKVEKNDPN+TKTLSRI
Sbjct: 301  YNNIEVFRGVVKMRRGLTAKVIDQTKTISDVYGAFFDFSCMLKSKVEKNDPNSTKTLSRI 360

Query: 535  EAIQQTCRESGLLNQRRSFIVGDQPRYNS 449
            EAIQ+TCRESG L++R+S+I+  +  +NS
Sbjct: 361  EAIQKTCRESGTLSKRKSYILRSKRTHNS 389


>ref|NP_001236365.1| squalene synthase [Glycine max] gi|2463569|dbj|BAA22559.1| squalene
            synthase [Glycine max]
          Length = 413

 Score =  671 bits (1731), Expect = 0.0
 Identities = 322/389 (82%), Positives = 362/389 (93%)
 Frame = -3

Query: 1615 MGILGAMVKYPDEIYPLLKLKMAQKHAAKQIPPQPHWAFCYSMLHKVSRSFAFVIQQLHP 1436
            MG LGA++K+PD+ YPLLKLKMA ++A KQIPP+PHWAFCY+MLHKVSRSFA VIQQL  
Sbjct: 1    MGSLGAILKHPDDFYPLLKLKMAARNAEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLGI 60

Query: 1435 ELRNAVCIFYLVLRALDTVEDDTSIASDVKVPILEAFHRHIYDPNWHFACGTKEYKILMD 1256
            ELRNAVCIFYLVLRALDTVEDDTSI +DVKVPIL AFHRHIYD +WHF+CGTKEYK+LMD
Sbjct: 61   ELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120

Query: 1255 ELHHVVTAFLELGKGYQEAIEEITKRMGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGL 1076
            + HHV TAFLELGK YQEAIE+ITKRMGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGL
Sbjct: 121  QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 1075 SKLFYASNLEDLIPDSLSNSMGLYLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVDKL 896
            SKLF+AS  EDL PD LSNSMGL+LQKTNIIRDYLEDINEIPKSRMFWPR+IWS+YV+KL
Sbjct: 181  SKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSEYVNKL 240

Query: 895  EDLKYEENSVQAVQCLNDMVTNALLHVEDCLKYMSALRDPSIFRFCAIPQIMAIGTLALC 716
            EDLKYEENSV+AVQCLNDMVTNAL+H EDCLKYM+ALRDP IFRFCAIPQIMAIGTLALC
Sbjct: 241  EDLKYEENSVKAVQCLNDMVTNALMHPEDCLKYMAALRDPPIFRFCAIPQIMAIGTLALC 300

Query: 715  YNNIAVFRGVVKMRRGLTAKLIDGTRSMSDVYGAFYDFSSILKSKVEKNDPNATKTLSRI 536
            YNNI VFRGVVKMRRGLTAK+ID T++M+DVYGAF+DF+S+L+ KV+KNDPNATKTLSR+
Sbjct: 301  YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLEPKVDKNDPNATKTLSRL 360

Query: 535  EAIQQTCRESGLLNQRRSFIVGDQPRYNS 449
            EAIQ+TCRESGLL++R+S+IV D+  Y S
Sbjct: 361  EAIQKTCRESGLLSKRKSYIVNDESGYGS 389


>gb|ADD54645.1| squalene synthase [Bruguiera gymnorhiza]
          Length = 416

 Score =  671 bits (1730), Expect = 0.0
 Identities = 319/389 (82%), Positives = 360/389 (92%)
 Frame = -3

Query: 1615 MGILGAMVKYPDEIYPLLKLKMAQKHAAKQIPPQPHWAFCYSMLHKVSRSFAFVIQQLHP 1436
            MG LGA+ K+PD++YPLLKLKMA KHA KQIPPQPHW FCY+MLHKVSRSFA VIQQL P
Sbjct: 1    MGSLGAIFKHPDDLYPLLKLKMAMKHAEKQIPPQPHWGFCYTMLHKVSRSFALVIQQLGP 60

Query: 1435 ELRNAVCIFYLVLRALDTVEDDTSIASDVKVPILEAFHRHIYDPNWHFACGTKEYKILMD 1256
            +LR+AVC+FYLVLRALDTVEDDTSIA+DVKVPIL AFH H+YD +WHF+CGTK+YK+LMD
Sbjct: 61   QLRDAVCVFYLVLRALDTVEDDTSIATDVKVPILIAFHHHLYDRDWHFSCGTKDYKVLMD 120

Query: 1255 ELHHVVTAFLELGKGYQEAIEEITKRMGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGL 1076
              HHV TAF ELGKG+QEAIEEITKRMGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGL
Sbjct: 121  LFHHVSTAFSELGKGHQEAIEEITKRMGAGMAKFISKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 1075 SKLFYASNLEDLIPDSLSNSMGLYLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVDKL 896
            SKLF+AS LEDL PD LSNSMGL+LQKTNIIRDYLEDINEIPK RMFWPRE WSKYVDKL
Sbjct: 181  SKLFHASQLEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPRETWSKYVDKL 240

Query: 895  EDLKYEENSVQAVQCLNDMVTNALLHVEDCLKYMSALRDPSIFRFCAIPQIMAIGTLALC 716
            EDLKYEENSV+AVQCLNDMVTN+L+HV+DCLKYMSAL+DP+IFRFCAIPQIMAIGTLA+C
Sbjct: 241  EDLKYEENSVKAVQCLNDMVTNSLIHVDDCLKYMSALQDPAIFRFCAIPQIMAIGTLAMC 300

Query: 715  YNNIAVFRGVVKMRRGLTAKLIDGTRSMSDVYGAFYDFSSILKSKVEKNDPNATKTLSRI 536
            YNNI VFRGVVKMRRGLTAK+ID T++M+DVYGAF+DFS +LK+KV+K+DPNATKTLSR+
Sbjct: 301  YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKAKVDKSDPNATKTLSRL 360

Query: 535  EAIQQTCRESGLLNQRRSFIVGDQPRYNS 449
            EAIQ+TCR SG L + +S I+G +PRYNS
Sbjct: 361  EAIQKTCRASGFLTKSKSRILGSEPRYNS 389


>ref|XP_003537842.1| PREDICTED: squalene synthase-like [Glycine max]
          Length = 413

 Score =  668 bits (1724), Expect = 0.0
 Identities = 322/389 (82%), Positives = 359/389 (92%)
 Frame = -3

Query: 1615 MGILGAMVKYPDEIYPLLKLKMAQKHAAKQIPPQPHWAFCYSMLHKVSRSFAFVIQQLHP 1436
            MG LGA++K PD+ YPLLKLKMA ++A KQIPP+PHWAFCY+MLHKVSRSFA VIQQL  
Sbjct: 1    MGSLGAILKNPDDFYPLLKLKMAARNAEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLGT 60

Query: 1435 ELRNAVCIFYLVLRALDTVEDDTSIASDVKVPILEAFHRHIYDPNWHFACGTKEYKILMD 1256
            ELRNAVCIFYLVLRALDTVEDDTSI +DVKVPIL AFHRHIYD +WHF+CGTKEYK+LMD
Sbjct: 61   ELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120

Query: 1255 ELHHVVTAFLELGKGYQEAIEEITKRMGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGL 1076
            + HHV TAFLELGK YQEAIE+ITKRMGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGL
Sbjct: 121  QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 1075 SKLFYASNLEDLIPDSLSNSMGLYLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVDKL 896
            SKLF+AS  EDL PD LSNSMGL+LQKTNIIRDYLEDINEIPKSRMFWPR+IWSKYV+KL
Sbjct: 181  SKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL 240

Query: 895  EDLKYEENSVQAVQCLNDMVTNALLHVEDCLKYMSALRDPSIFRFCAIPQIMAIGTLALC 716
            EDLKYEENSV+AVQCLNDMVTNAL+H EDCL YM+ALRDP IFRFCAIPQIMAIGTLALC
Sbjct: 241  EDLKYEENSVKAVQCLNDMVTNALMHAEDCLTYMAALRDPPIFRFCAIPQIMAIGTLALC 300

Query: 715  YNNIAVFRGVVKMRRGLTAKLIDGTRSMSDVYGAFYDFSSILKSKVEKNDPNATKTLSRI 536
            YNNI VFRGVVKMRRGLTAK+ID T +M+DVYGAF+DF+S+L+SKV+KNDPNATK LSR+
Sbjct: 301  YNNIEVFRGVVKMRRGLTAKVIDRTTTMADVYGAFFDFASMLESKVDKNDPNATKALSRL 360

Query: 535  EAIQQTCRESGLLNQRRSFIVGDQPRYNS 449
            EAIQ+TCRESGLL++R+S+IV D+  Y S
Sbjct: 361  EAIQKTCRESGLLSKRKSYIVKDESGYGS 389


>gb|ACU21003.1| unknown [Glycine max]
          Length = 413

 Score =  668 bits (1723), Expect = 0.0
 Identities = 321/389 (82%), Positives = 361/389 (92%)
 Frame = -3

Query: 1615 MGILGAMVKYPDEIYPLLKLKMAQKHAAKQIPPQPHWAFCYSMLHKVSRSFAFVIQQLHP 1436
            MG LGA++K+PD+ YPLLKLKMA ++A KQIPP+PHWAF Y+MLHKVSRSFA VIQQL  
Sbjct: 1    MGSLGAILKHPDDFYPLLKLKMAARNAEKQIPPEPHWAFRYTMLHKVSRSFALVIQQLGT 60

Query: 1435 ELRNAVCIFYLVLRALDTVEDDTSIASDVKVPILEAFHRHIYDPNWHFACGTKEYKILMD 1256
            ELRNAVCIFYLVLRALDTVEDDTSI +DVKVPIL AFHRHIYD +WHF+CGTKEYK+LMD
Sbjct: 61   ELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD 120

Query: 1255 ELHHVVTAFLELGKGYQEAIEEITKRMGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGL 1076
            + HHV TAFLELGK YQEAIE+ITKRMGAGMAKFI KEVET+D+YDEYCHYVAGLVGLGL
Sbjct: 121  QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 1075 SKLFYASNLEDLIPDSLSNSMGLYLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVDKL 896
            SKLF+AS  EDL PD LSNSMGL+LQKTNIIRDYLEDINEIPKSRMFWPR+IWS+YV+KL
Sbjct: 181  SKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSEYVNKL 240

Query: 895  EDLKYEENSVQAVQCLNDMVTNALLHVEDCLKYMSALRDPSIFRFCAIPQIMAIGTLALC 716
            EDLKYEENSV+AVQCLNDMVTNAL+H EDCLKYM+ALRDP IFRFCAIPQIMAIGTLALC
Sbjct: 241  EDLKYEENSVKAVQCLNDMVTNALMHAEDCLKYMAALRDPPIFRFCAIPQIMAIGTLALC 300

Query: 715  YNNIAVFRGVVKMRRGLTAKLIDGTRSMSDVYGAFYDFSSILKSKVEKNDPNATKTLSRI 536
            YNNI VFRGVVKMRRGLTAK+ID T++M+DVYGAF+DF+S+L+ KV+KNDPNATKTLSR+
Sbjct: 301  YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLEPKVDKNDPNATKTLSRL 360

Query: 535  EAIQQTCRESGLLNQRRSFIVGDQPRYNS 449
            EAIQ+TCRESGLL++R+S+IV D+  Y S
Sbjct: 361  EAIQKTCRESGLLSKRKSYIVNDESGYGS 389


Top