BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006077
         (1630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   457   e-126
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   457   e-126
ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP...   438   e-120
ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding prote...   436   e-119
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   435   e-119

>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 409

 Score =  457 bits (1177), Expect = e-126
 Identities = 251/411 (61%), Positives = 274/411 (66%)
 Frame = -3

Query: 1625 QQWMAAAMQYPGXXXXXXXXXXXXXMTAAAPSHYPTPHFLPFIHXXXXXXXXXXXXXXXG 1446
            QQWMA  MQYP                   P HYP  HF+ + H                
Sbjct: 27   QQWMA--MQYPAAAMVMQHQMMP-------PQHYPQ-HFVAYHHQPHQYQHQHQQQHQQQ 76

Query: 1445 EGVTEENRKSIWVGDLHYWMDENYLHTCFGHTGEVTSIKVIRNKQTGQSEGYGFVEFYSH 1266
            +G   +NR +IWVGDLH WMDENYLH+CF  TGE+ S+KVIRNKQTG SEGYGFVEF+SH
Sbjct: 77   QGSNADNR-TIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSH 135

Query: 1265 AAAEKILQTYNGAPMLSSEQPFRLNWASNSMGDKRSDVGTDRSIFVGDLAADVTDTLLQE 1086
            AAAEK+LQ Y G  M +++QPFRLNWA+ SMGDKRSD G D SIFVGDLA+DV+D+LL E
Sbjct: 136  AAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHE 195

Query: 1085 TFASKYSSVKGAKVVIDATTGRSKGYGFVRFGDDNERSQAMTEMNGQYCSSRQMRIGLAT 906
            TFA KY SVK AKVV DA TGRSKGYGFVRFGD+NERSQAMTEMNG YCSSR MRIG AT
Sbjct: 196  TFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAAT 255

Query: 905  PRKSSGYQQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIFVGGLDPSVTDEDLRQTFS 726
            PRKSSGYQQQ+                            TIFVGGLDP+V+DEDLRQ FS
Sbjct: 256  PRKSSGYQQQY---------------SSHVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFS 300

Query: 725  QHGEITSVKIPGGKGCGFVQFANRNNAEDALQKLNATVIGKQTVRLSWGRNPANKQSRVD 546
            Q+GEI SVKIP GKGCGFVQFANRNNAEDALQKLN TVIGKQTVRLSWGRNPANKQ R D
Sbjct: 301  QYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRAD 360

Query: 545  RGNQWNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPVYGNHQQQVS 393
             GNQW+                                 YPVYGNHQQQVS
Sbjct: 361  FGNQWSG--AYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPVYGNHQQQVS 409


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 418

 Score =  457 bits (1177), Expect = e-126
 Identities = 251/411 (61%), Positives = 274/411 (66%)
 Frame = -3

Query: 1625 QQWMAAAMQYPGXXXXXXXXXXXXXMTAAAPSHYPTPHFLPFIHXXXXXXXXXXXXXXXG 1446
            QQWMA  MQYP                   P HYP  HF+ + H                
Sbjct: 27   QQWMA--MQYPAAAMVMQHQMMP-------PQHYPQ-HFVAYHHQPHQYQHQHQQQHQQQ 76

Query: 1445 EGVTEENRKSIWVGDLHYWMDENYLHTCFGHTGEVTSIKVIRNKQTGQSEGYGFVEFYSH 1266
            +G   +NR +IWVGDLH WMDENYLH+CF  TGE+ S+KVIRNKQTG SEGYGFVEF+SH
Sbjct: 77   QGSNADNR-TIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSH 135

Query: 1265 AAAEKILQTYNGAPMLSSEQPFRLNWASNSMGDKRSDVGTDRSIFVGDLAADVTDTLLQE 1086
            AAAEK+LQ Y G  M +++QPFRLNWA+ SMGDKRSD G D SIFVGDLA+DV+D+LL E
Sbjct: 136  AAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHE 195

Query: 1085 TFASKYSSVKGAKVVIDATTGRSKGYGFVRFGDDNERSQAMTEMNGQYCSSRQMRIGLAT 906
            TFA KY SVK AKVV DA TGRSKGYGFVRFGD+NERSQAMTEMNG YCSSR MRIG AT
Sbjct: 196  TFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAAT 255

Query: 905  PRKSSGYQQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIFVGGLDPSVTDEDLRQTFS 726
            PRKSSGYQQQ+                            TIFVGGLDP+V+DEDLRQ FS
Sbjct: 256  PRKSSGYQQQY------SSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFS 309

Query: 725  QHGEITSVKIPGGKGCGFVQFANRNNAEDALQKLNATVIGKQTVRLSWGRNPANKQSRVD 546
            Q+GEI SVKIP GKGCGFVQFANRNNAEDALQKLN TVIGKQTVRLSWGRNPANKQ R D
Sbjct: 310  QYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRAD 369

Query: 545  RGNQWNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPVYGNHQQQVS 393
             GNQW+                                 YPVYGNHQQQVS
Sbjct: 370  FGNQWSG--AYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPVYGNHQQQVS 418


>ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
            sativus] gi|449496017|ref|XP_004160013.1| PREDICTED:
            polyadenylate-binding protein RBP47C-like [Cucumis
            sativus]
          Length = 429

 Score =  438 bits (1127), Expect = e-120
 Identities = 238/414 (57%), Positives = 271/414 (65%), Gaps = 3/414 (0%)
 Frame = -3

Query: 1625 QQWMAAAMQYPGXXXXXXXXXXXXXMTAAAPSHY---PTPHFLPFIHXXXXXXXXXXXXX 1455
            Q+WMA  MQYP                   P HY   P+PH++P+               
Sbjct: 31   QRWMA--MQYPAAAMIMQHPMMP-------PQHYVPPPSPHYIPYRQYPPPHQLNGQQHQ 81

Query: 1454 XXGEGVTEENRKSIWVGDLHYWMDENYLHTCFGHTGEVTSIKVIRNKQTGQSEGYGFVEF 1275
               +G T EN K+IWVGDL +WMDENYLH+CF  TGE++S+KVIRNKQTG SEGYGFVEF
Sbjct: 82   QPHQGSTSEN-KTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRNKQTGISEGYGFVEF 140

Query: 1274 YSHAAAEKILQTYNGAPMLSSEQPFRLNWASNSMGDKRSDVGTDRSIFVGDLAADVTDTL 1095
            +SH  AEK+LQ Y+   M ++EQ FRLNWA+ S GDKRS+ G+D SIFVGDLAADVTD++
Sbjct: 141  FSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSV 200

Query: 1094 LQETFASKYSSVKGAKVVIDATTGRSKGYGFVRFGDDNERSQAMTEMNGQYCSSRQMRIG 915
            L ETFASKYSSVK AKVV D  TG SKGYGFVRFGDDNERSQAMTEMNG YCSSR MRIG
Sbjct: 201  LHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIG 260

Query: 914  LATPRKSSGYQQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIFVGGLDPSVTDEDLRQ 735
             ATP+KSSGYQQQ+                            TIF+GGLDP+VTDEDL+Q
Sbjct: 261  AATPKKSSGYQQQY----SSQGYASNGSFSHGHQSDGDFTNTTIFIGGLDPNVTDEDLKQ 316

Query: 734  TFSQHGEITSVKIPGGKGCGFVQFANRNNAEDALQKLNATVIGKQTVRLSWGRNPANKQS 555
             FSQHGEI SVKIP GKGCGF+QFANR NAE+ALQKLN TVIGKQTVRLSWGR+P NKQ 
Sbjct: 317  LFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRLSWGRSPTNKQY 376

Query: 554  RVDRGNQWNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPVYGNHQQQVS 393
            R D GN W+                                 YP+YG HQQQV+
Sbjct: 377  RGDYGNHWSG-AYYGGQVYGGYGYALPLPYDPPTMYAAAYGAYPMYGTHQQQVN 429


>ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 416

 Score =  436 bits (1120), Expect = e-119
 Identities = 233/374 (62%), Positives = 265/374 (70%), Gaps = 7/374 (1%)
 Frame = -3

Query: 1628 QQQWMAAAMQYPGXXXXXXXXXXXXXMTAAAPSH---YPTPHFLPFIHXXXXXXXXXXXX 1458
            QQQWMA  MQYP                A    H   YP  H++P+ H            
Sbjct: 27   QQQWMA--MQYPA--------------AAMVMQHQMMYPQ-HYMPYHHPQPPQQYQNQPP 69

Query: 1457 XXXGEGVTEENRKSIWVGDLHYWMDENYLHTCFGHTGEV--TSIKVIRNKQTGQSEGYGF 1284
                 G T+E  K++WVGDLH WMD+NYL TCFGHTGEV  +SIK+IRNKQTGQSEGYGF
Sbjct: 70   QHQMHGSTDEI-KTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGF 128

Query: 1283 VEFYSHAAAEKILQTYNGAPMLSSEQPFRLNWASNSMGDKRSDVGTDRSIFVGDLAADVT 1104
            VEF+S A AEKIL +YNG  M ++EQPFRLNWA+ S GD+R+D G+D SIFVGDLA+DVT
Sbjct: 129  VEFFSRATAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVT 188

Query: 1103 DTLLQETFASKYSSVKGAKVVIDATTGRSKGYGFVRFGDDNERSQAMTEMNGQYCSSRQM 924
            D LLQETFA++Y SVKGAKVV D+ TGRSKGYGFVRFGD+NERS+AM EMNG YCSSR M
Sbjct: 189  DALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPM 248

Query: 923  RIGLATPRKSSGYQQQH--XXXXXXXXXXXXXXXXXXXXXXXXXXXXTIFVGGLDPSVTD 750
            RIG+ATP+K+SGYQQQ+                              TIFVGGLD  VTD
Sbjct: 249  RIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTD 308

Query: 749  EDLRQTFSQHGEITSVKIPGGKGCGFVQFANRNNAEDALQKLNATVIGKQTVRLSWGRNP 570
            EDLRQ+FSQ GE+ SVKIP GKGCGFVQFANRN+AEDALQ+LN TVIGKQTVRLSWGRNP
Sbjct: 309  EDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNP 368

Query: 569  ANKQSRVDRGNQWN 528
            A+KQ R D  NQWN
Sbjct: 369  ASKQWRNDSNNQWN 382


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223550967|gb|EEF52453.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 443

 Score =  435 bits (1119), Expect = e-119
 Identities = 248/419 (59%), Positives = 269/419 (64%), Gaps = 7/419 (1%)
 Frame = -3

Query: 1628 QQQWMAAAMQYPGXXXXXXXXXXXXXMTAAAP-SHYPTP-----HFLPFIHXXXXXXXXX 1467
            QQQWMA  MQYP                A  P  HY T      H  P  H         
Sbjct: 40   QQQWMA--MQYPAAAMVMQHQMLPPQHYAPPPPQHYMTAYHQYHHHHPHPHQPQQHHQNQ 97

Query: 1466 XXXXXXGEGVTEENRKSIWVGDLHYWMDENYLHTCFGHTGEVTSIKVIRNKQTGQSEGYG 1287
                  G G   ENR ++W+GDLH+WMDENYLHTCF  TGE+ SIKVIRNKQTG SEGYG
Sbjct: 98   GSSGGGGGG---ENR-TVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYG 153

Query: 1286 FVEFYSHAAAEKILQTYNGAPMLSSEQPFRLNWASNSMGDKRSDVGTDRSIFVGDLAADV 1107
            FVEFY+HA AEK+LQ Y G  M ++EQPFRLNWA+ S GDKRSD   D SIFVGDLAADV
Sbjct: 154  FVEFYTHATAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADV 213

Query: 1106 TDTLLQETFASKYSSVKGAKVVIDATTGRSKGYGFVRFGDDNERSQAMTEMNGQYCSSRQ 927
            TD+LL ETF S+Y SVK AKVV DA TGRSKGYGFVRFGDDNER+QAMTEMNG YCSSR 
Sbjct: 214  TDSLLHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRA 273

Query: 926  MRIGLATPRKSSGYQQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIFVGGLDPSVTDE 747
            MRIG ATPRKS+GYQ Q                             TIFVGGLDP+VTDE
Sbjct: 274  MRIGAATPRKSTGYQHQ-------GGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDE 326

Query: 746  DLRQTFSQHGEITSVKIPGGKGCGFVQFANRNNAEDALQKLNATVIGKQTVRLSWGRNPA 567
            DL+Q FSQ+GEI SVKIP GKGCGFVQFA+R+NAE+ALQKLN TVIGKQTVRLSWGRNPA
Sbjct: 327  DLKQPFSQYGEIVSVKIPVGKGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPA 386

Query: 566  NKQS-RVDRGNQWNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPVYGNHQQQVS 393
            NKQ  R D GNQW                                  YPVYG+HQQQVS
Sbjct: 387  NKQQLRSDFGNQWGG--AYYGGQIYDGYGYALPPPHDPSMYAAPYGAYPVYGSHQQQVS 443