BLASTX nr result

ID: Coptis21_contig00005973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005973
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512614.1| pelota, putative [Ricinus communis] gi|22354...   153   1e-35
ref|XP_002279875.1| PREDICTED: protein pelota [Vitis vinifera] g...   150   1e-34
ref|XP_002306749.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|NP_194495.3| Eukaryotic release factor 1 (eRF1) family prote...   147   1e-33
ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arab...   147   1e-33

>ref|XP_002512614.1| pelota, putative [Ricinus communis] gi|223548575|gb|EEF50066.1|
           pelota, putative [Ricinus communis]
          Length = 378

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/86 (87%), Positives = 82/86 (95%)
 Frame = +3

Query: 3   CYGPKHVEVAHEQMAIQTLLITDELFRNADIPTRKKYVDLVSSVKDIGGTALIFSSMHVS 182
           CYGPKHVEVAHE+MA+QTLLITD+LFRNADIPTRKKYV+LV+SVKD GG A IFSSMHVS
Sbjct: 293 CYGPKHVEVAHERMAVQTLLITDDLFRNADIPTRKKYVNLVNSVKDSGGNAHIFSSMHVS 352

Query: 183 GEQLATLTGIAAILRFPLPELDDIEM 260
           GEQLA LTGIAAILRFPLP+L+DIEM
Sbjct: 353 GEQLAQLTGIAAILRFPLPDLEDIEM 378


>ref|XP_002279875.1| PREDICTED: protein pelota [Vitis vinifera]
           gi|297735305|emb|CBI17667.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/86 (84%), Positives = 82/86 (95%)
 Frame = +3

Query: 3   CYGPKHVEVAHEQMAIQTLLITDELFRNADIPTRKKYVDLVSSVKDIGGTALIFSSMHVS 182
           CYGPKHVEVAHE+MA+QTLLITD+LFR+ADIPTR+KYV+ V+SVKD GGTA IFSSMHVS
Sbjct: 293 CYGPKHVEVAHERMAVQTLLITDDLFRSADIPTRQKYVNFVNSVKDSGGTAHIFSSMHVS 352

Query: 183 GEQLATLTGIAAILRFPLPELDDIEM 260
           GEQLA LTGIAAILRFPLP+L+DIEM
Sbjct: 353 GEQLAQLTGIAAILRFPLPDLEDIEM 378


>ref|XP_002306749.1| predicted protein [Populus trichocarpa] gi|222856198|gb|EEE93745.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  149 bits (376), Expect = 3e-34
 Identities = 73/86 (84%), Positives = 79/86 (91%)
 Frame = +3

Query: 3   CYGPKHVEVAHEQMAIQTLLITDELFRNADIPTRKKYVDLVSSVKDIGGTALIFSSMHVS 182
           CYGPKHVEVAHE+MA+QTLLITDELFRNADIP RKKYV+LV+SVK  GGT  IFSSMH S
Sbjct: 292 CYGPKHVEVAHERMAVQTLLITDELFRNADIPMRKKYVNLVNSVKGSGGTVHIFSSMHAS 351

Query: 183 GEQLATLTGIAAILRFPLPELDDIEM 260
           GEQLA LTG+AAILRFPLPEL+DIEM
Sbjct: 352 GEQLAQLTGVAAILRFPLPELEDIEM 377


>ref|NP_194495.3| Eukaryotic release factor 1 (eRF1) family protein [Arabidopsis
           thaliana] gi|3941543|gb|AAC82379.1| pelota [Arabidopsis
           thaliana] gi|4469016|emb|CAB38277.1| pelota (PEL1)
           [Arabidopsis thaliana] gi|7269619|emb|CAB81415.1| pelota
           (PEL1) [Arabidopsis thaliana] gi|18377690|gb|AAL66995.1|
           putative pelota (PEL1) protein [Arabidopsis thaliana]
           gi|20465995|gb|AAM20219.1| putative pelota protein
           (PEL1) [Arabidopsis thaliana]
           gi|332659974|gb|AEE85374.1| Eukaryotic release factor 1
           (eRF1) family protein [Arabidopsis thaliana]
          Length = 378

 Score =  147 bits (371), Expect = 1e-33
 Identities = 72/86 (83%), Positives = 80/86 (93%)
 Frame = +3

Query: 3   CYGPKHVEVAHEQMAIQTLLITDELFRNADIPTRKKYVDLVSSVKDIGGTALIFSSMHVS 182
           CYGPKHVEVA+E+MAIQTLLITDELFRN+D+ TRKKYV+LV SVKD GG A IFS+MHVS
Sbjct: 293 CYGPKHVEVANERMAIQTLLITDELFRNSDVKTRKKYVNLVESVKDSGGDAFIFSAMHVS 352

Query: 183 GEQLATLTGIAAILRFPLPELDDIEM 260
           GEQLA LTGIAA+LRFPLPEL+DIEM
Sbjct: 353 GEQLAQLTGIAALLRFPLPELEDIEM 378


>ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arabidopsis lyrata subsp.
           lyrata] gi|297313324|gb|EFH43747.1| hypothetical protein
           ARALYDRAFT_492022 [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score =  147 bits (371), Expect = 1e-33
 Identities = 72/86 (83%), Positives = 80/86 (93%)
 Frame = +3

Query: 3   CYGPKHVEVAHEQMAIQTLLITDELFRNADIPTRKKYVDLVSSVKDIGGTALIFSSMHVS 182
           CYGPKHVEVA+E+MAIQTLLITDELFRN+D+ TRKKYV+LV SVKD GG A IFS+MHVS
Sbjct: 293 CYGPKHVEVANERMAIQTLLITDELFRNSDVKTRKKYVNLVESVKDSGGEAFIFSAMHVS 352

Query: 183 GEQLATLTGIAAILRFPLPELDDIEM 260
           GEQLA LTGIAA+LRFPLPEL+DIEM
Sbjct: 353 GEQLAQLTGIAALLRFPLPELEDIEM 378


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