BLASTX nr result

ID: Coptis21_contig00005960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005960
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448004.1| hypothetical protein SORBIDRAFT_06g019540 [S...   104   1e-20
ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_002525637.1| ATP-binding cassette transporter, putative [...   100   1e-19
emb|CBI15958.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002279155.1| PREDICTED: ABC transporter G family member 3...   100   2e-19

>ref|XP_002448004.1| hypothetical protein SORBIDRAFT_06g019540 [Sorghum bicolor]
            gi|241939187|gb|EES12332.1| hypothetical protein
            SORBIDRAFT_06g019540 [Sorghum bicolor]
          Length = 1389

 Score =  104 bits (259), Expect = 1e-20
 Identities = 46/70 (65%), Positives = 53/70 (75%)
 Frame = +1

Query: 73   FT*LYIYHFLQSIPGWWIWFYYISPVAWTLRGIVSSQLGDSEDHIVGPGFEGMVKEFLET 252
            FT    Y  +  IPGWWIWFYYI PVAWTLRGI++SQLGD +  IVGPGF+G V+EFLE 
Sbjct: 1291 FTYFTFYGMVARIPGWWIWFYYICPVAWTLRGIITSQLGDVQTRIVGPGFDGTVQEFLEE 1350

Query: 253  SLGFGPGMVG 282
            +LGF  GM G
Sbjct: 1351 TLGFQQGMAG 1360


>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
            predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  103 bits (257), Expect = 2e-20
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = +1

Query: 106  SIPGWWIWFYYISPVAWTLRGIVSSQLGDSEDHIVGPGFEGMVKEFLETSLGFGPGMVG 282
            SIPGWWIWFYYI P+AWTLRG++ SQLGD E  IVGPGFEG VK++LE + G+GP M+G
Sbjct: 1345 SIPGWWIWFYYICPIAWTLRGVICSQLGDVETIIVGPGFEGTVKKYLEVTFGYGPNMIG 1403


>ref|XP_002525637.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223535073|gb|EEF36755.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1433

 Score =  100 bits (250), Expect = 1e-19
 Identities = 41/61 (67%), Positives = 50/61 (81%)
 Frame = +1

Query: 100  LQSIPGWWIWFYYISPVAWTLRGIVSSQLGDSEDHIVGPGFEGMVKEFLETSLGFGPGMV 279
            +  IPGWWIWFYYI P+AWTLRG++SSQLGD ED IVGPGF+G VKE+L+ + GF   M+
Sbjct: 1344 MSKIPGWWIWFYYICPIAWTLRGVISSQLGDVEDIIVGPGFKGTVKEYLKVNFGFESNMI 1403

Query: 280  G 282
            G
Sbjct: 1404 G 1404


>emb|CBI15958.3| unnamed protein product [Vitis vinifera]
          Length = 1483

 Score =  100 bits (248), Expect = 2e-19
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = +1

Query: 109  IPGWWIWFYYISPVAWTLRGIVSSQLGDSEDHIVGPGFEGMVKEFLETSLGFGPGMVG 282
            IPGWWIWFYYI PVAWTLRGI+SSQLGD  +  +GPGF+G V ++L   LGFGPGM+G
Sbjct: 1397 IPGWWIWFYYICPVAWTLRGIISSQLGDVTEITIGPGFKGAVNKYLNDKLGFGPGMIG 1454


>ref|XP_002279155.1| PREDICTED: ABC transporter G family member 31-like [Vitis vinifera]
          Length = 1415

 Score =  100 bits (248), Expect = 2e-19
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = +1

Query: 109  IPGWWIWFYYISPVAWTLRGIVSSQLGDSEDHIVGPGFEGMVKEFLETSLGFGPGMVG 282
            IPGWWIWFYYI PVAWTLRGI+SSQLGD  +  +GPGF+G V ++L   LGFGPGM+G
Sbjct: 1329 IPGWWIWFYYICPVAWTLRGIISSQLGDVTEITIGPGFKGAVNKYLNDKLGFGPGMIG 1386


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