BLASTX nr result

ID: Coptis21_contig00005957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005957
         (1219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33529.1| expansin [Prunus armeniaca]                            458   e-126
gb|AAG13982.1|AF297521_1 expansin 1 [Prunus avium] gi|13898651|g...   457   e-126
dbj|BAC67190.1| expansin [Pyrus communis]                             446   e-123
dbj|BAH36861.1| alpha expansin [Rosa hybrid cultivar]                 443   e-122
gb|AAM08928.1| expansin 1 [Malus x domestica]                         443   e-122

>gb|AAC33529.1| expansin [Prunus armeniaca]
          Length = 254

 Score =  458 bits (1179), Expect = e-126
 Identities = 213/254 (83%), Positives = 227/254 (89%), Gaps = 1/254 (0%)
 Frame = -2

Query: 1056 MAIQGCSLA-LLFSFVVFNLHLHGIFGDYGGWEGAHATFYXXXXXXXXXXXXXGYGNLYS 880
            MA Q  SLA L  S V+FNLHLHG F DYGGWEGAHATFY             GYGNLYS
Sbjct: 1    MAPQALSLAPLALSLVLFNLHLHGAFADYGGWEGAHATFYGGGDASGTMGGACGYGNLYS 60

Query: 879  QGYGTNTAALSTALFNNGLSCGSCYEMRCNDDPRWCLPGSITVTATNFCPPNPAQSNDNG 700
            QGYGTNTAALSTALFNNGLSCGSCYEMRCN+DPRWC PGSI VTATNFCPPN AQSNDNG
Sbjct: 61   QGYGTNTAALSTALFNNGLSCGSCYEMRCNNDPRWCRPGSIIVTATNFCPPNFAQSNDNG 120

Query: 699  GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRYTINGHSYFNLVLITN 520
            GWCNPPLQHFDLAEPAFLQIAQYRAGIVPV+FRRVPCMKKGGIR+TINGHSYFNLVLITN
Sbjct: 121  GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVTFRRVPCMKKGGIRFTINGHSYFNLVLITN 180

Query: 519  VGGAGDVHAVSVKGSRTGWQPMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTITSYNIAP 340
            VGGAGDVH+VS+KGSRTGWQPMSRNWGQNWQSN+Y+NGQSLSFQVTTSDGRT+TSYN+AP
Sbjct: 181  VGGAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYNVAP 240

Query: 339  ADWQFGKTYQGGQY 298
             +WQFG+T+ GGQ+
Sbjct: 241  GNWQFGQTFSGGQF 254


>gb|AAG13982.1|AF297521_1 expansin 1 [Prunus avium] gi|13898651|gb|AAK48846.1|AF350937_1
            expansin [Prunus cerasus]
          Length = 254

 Score =  457 bits (1176), Expect = e-126
 Identities = 212/254 (83%), Positives = 227/254 (89%), Gaps = 1/254 (0%)
 Frame = -2

Query: 1056 MAIQGCSLA-LLFSFVVFNLHLHGIFGDYGGWEGAHATFYXXXXXXXXXXXXXGYGNLYS 880
            MA Q  SLA L  S V+FNLHLHG F DYGGWEGAHATFY             GYGNLYS
Sbjct: 1    MAPQALSLAPLALSLVLFNLHLHGAFADYGGWEGAHATFYGGGDASGTMGGACGYGNLYS 60

Query: 879  QGYGTNTAALSTALFNNGLSCGSCYEMRCNDDPRWCLPGSITVTATNFCPPNPAQSNDNG 700
            QGYGTNTAALSTALFNNGLSCGSCYEMRCN+DPRWC PGSI VTATNFCPPN AQSNDNG
Sbjct: 61   QGYGTNTAALSTALFNNGLSCGSCYEMRCNNDPRWCRPGSIIVTATNFCPPNFAQSNDNG 120

Query: 699  GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRYTINGHSYFNLVLITN 520
            GWCNPPLQHFDLAEPAFLQIAQYRAGIVPV+FRRVPCMKKGGIR+TINGHSYFNLVLITN
Sbjct: 121  GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVTFRRVPCMKKGGIRFTINGHSYFNLVLITN 180

Query: 519  VGGAGDVHAVSVKGSRTGWQPMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTITSYNIAP 340
            VGGAGDVH+VS+KGSRTGWQPMSRNWGQNWQSN+Y+NGQSLSFQVTTSDGRT+T+YN+AP
Sbjct: 181  VGGAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFQVTTSDGRTVTNYNVAP 240

Query: 339  ADWQFGKTYQGGQY 298
             +WQFG+T+ GGQ+
Sbjct: 241  GNWQFGQTFSGGQF 254


>dbj|BAC67190.1| expansin [Pyrus communis]
          Length = 254

 Score =  446 bits (1146), Expect = e-123
 Identities = 206/254 (81%), Positives = 223/254 (87%), Gaps = 1/254 (0%)
 Frame = -2

Query: 1056 MAIQGCSLA-LLFSFVVFNLHLHGIFGDYGGWEGAHATFYXXXXXXXXXXXXXGYGNLYS 880
            MA    S A +  S V+FNLHLHG+F  YG WEGAHATFY             GYGNLYS
Sbjct: 1    MAAHALSFAPIALSVVLFNLHLHGVFAVYGSWEGAHATFYGGGDASGTMGGACGYGNLYS 60

Query: 879  QGYGTNTAALSTALFNNGLSCGSCYEMRCNDDPRWCLPGSITVTATNFCPPNPAQSNDNG 700
            QGYGTNTAALSTALFNNGLSCGSCYEMRC++DPRWC PGSI VTATNFCPPN AQSNDNG
Sbjct: 61   QGYGTNTAALSTALFNNGLSCGSCYEMRCDNDPRWCRPGSIIVTATNFCPPNFAQSNDNG 120

Query: 699  GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRYTINGHSYFNLVLITN 520
            GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPC+KKGGIR+TINGHSYFNLVLITN
Sbjct: 121  GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTINGHSYFNLVLITN 180

Query: 519  VGGAGDVHAVSVKGSRTGWQPMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTITSYNIAP 340
            V GAGDVH+VS+KGSRTGWQPMSRNWGQNWQSNSY+NGQ+LSFQVTTSDGRT+TSYN+AP
Sbjct: 181  VAGAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQALSFQVTTSDGRTVTSYNVAP 240

Query: 339  ADWQFGKTYQGGQY 298
             +WQFG+T+ GGQ+
Sbjct: 241  GNWQFGQTFSGGQF 254


>dbj|BAH36861.1| alpha expansin [Rosa hybrid cultivar]
          Length = 253

 Score =  443 bits (1140), Expect = e-122
 Identities = 204/253 (80%), Positives = 220/253 (86%)
 Frame = -2

Query: 1056 MAIQGCSLALLFSFVVFNLHLHGIFGDYGGWEGAHATFYXXXXXXXXXXXXXGYGNLYSQ 877
            MA    SLA L   V+FNLH H  F DYGGW G HATFY             GYGNLYSQ
Sbjct: 1    MAASALSLAPLALLVLFNLHFHSTFADYGGWNGGHATFYGGGDASGTMGGACGYGNLYSQ 60

Query: 876  GYGTNTAALSTALFNNGLSCGSCYEMRCNDDPRWCLPGSITVTATNFCPPNPAQSNDNGG 697
            GYGTNTAALSTALFN+GLSCGSCYEMRC++DPRWC PGSI VTATNFCPPN AQ+NDNGG
Sbjct: 61   GYGTNTAALSTALFNDGLSCGSCYEMRCDNDPRWCRPGSIIVTATNFCPPNFAQANDNGG 120

Query: 696  WCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRYTINGHSYFNLVLITNV 517
            WCNPPLQHFDLAEPAFLQIAQYRAGIVPV+FRRVPC+KKGGIR+TINGHSYFNLVLITNV
Sbjct: 121  WCNPPLQHFDLAEPAFLQIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNV 180

Query: 516  GGAGDVHAVSVKGSRTGWQPMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTITSYNIAPA 337
            GGAGDVH+VS+KGSRTGWQ MSRNWGQNWQSNSY+NGQ LSFQVTTSDGRT+TSYN+AP 
Sbjct: 181  GGAGDVHSVSIKGSRTGWQSMSRNWGQNWQSNSYLNGQLLSFQVTTSDGRTVTSYNVAPG 240

Query: 336  DWQFGKTYQGGQY 298
            +WQFG+TYQGGQ+
Sbjct: 241  NWQFGQTYQGGQF 253


>gb|AAM08928.1| expansin 1 [Malus x domestica]
          Length = 254

 Score =  443 bits (1139), Expect = e-122
 Identities = 205/254 (80%), Positives = 221/254 (87%), Gaps = 1/254 (0%)
 Frame = -2

Query: 1056 MAIQGCSLA-LLFSFVVFNLHLHGIFGDYGGWEGAHATFYXXXXXXXXXXXXXGYGNLYS 880
            MA    SLA +  S V+FNLHLHG+   YG WEG HATFY             GYGNLYS
Sbjct: 1    MAAHPLSLASIALSLVLFNLHLHGVLAVYGSWEGVHATFYGGGDASATMGGACGYGNLYS 60

Query: 879  QGYGTNTAALSTALFNNGLSCGSCYEMRCNDDPRWCLPGSITVTATNFCPPNPAQSNDNG 700
            QGYGTNTAALSTALFNNGLSCGSCYEM CN+DPRWC PGSI VTATNFCPPN A+SNDNG
Sbjct: 61   QGYGTNTAALSTALFNNGLSCGSCYEMMCNNDPRWCRPGSIIVTATNFCPPNFAESNDNG 120

Query: 699  GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRYTINGHSYFNLVLITN 520
            GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIR+TINGHSYFNLVLITN
Sbjct: 121  GWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLITN 180

Query: 519  VGGAGDVHAVSVKGSRTGWQPMSRNWGQNWQSNSYMNGQSLSFQVTTSDGRTITSYNIAP 340
            V GAGDVH+VS+KGSRTGWQPMSRNWGQNWQSNSY+NGQ+LSFQVTTSDGRT+TSYN+AP
Sbjct: 181  VAGAGDVHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQALSFQVTTSDGRTVTSYNVAP 240

Query: 339  ADWQFGKTYQGGQY 298
             +WQFG+T+ GGQ+
Sbjct: 241  GNWQFGQTFSGGQF 254


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