BLASTX nr result

ID: Coptis21_contig00005955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00005955
         (1339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313911.1| predicted protein [Populus trichocarpa] gi|2...   261   4e-67
ref|XP_002527518.1| conserved hypothetical protein [Ricinus comm...   257   4e-66
ref|XP_002265317.1| PREDICTED: uncharacterized protein LOC100263...   239   1e-60
ref|XP_004152279.1| PREDICTED: uncharacterized protein LOC101213...   221   3e-55
gb|AFK35237.1| unknown [Lotus japonicus]                              181   3e-43

>ref|XP_002313911.1| predicted protein [Populus trichocarpa] gi|222850319|gb|EEE87866.1|
            predicted protein [Populus trichocarpa]
          Length = 317

 Score =  261 bits (666), Expect = 4e-67
 Identities = 156/317 (49%), Positives = 199/317 (62%), Gaps = 7/317 (2%)
 Frame = -2

Query: 1224 PKRSRRDGKPESERNHARAHDLDTLNSKDKDQKLRRRLQDPLPLEAPIEPESKVVTDNAI 1045
            PKRSRRDGKPE+ER         T++S + DQK RRRLQD LPLE P  P+S  V    +
Sbjct: 23   PKRSRRDGKPETERV--------TIDS-NLDQKNRRRLQDALPLETPSGPDSAKVESGGV 73

Query: 1044 S-ELEKTADEQNAGAKHFSDPTEVPRSRSYFQHDERASAGQGGRSFGRRATTERGWGSGS 868
            S E +K  +E   G+KH S PTEVP SRS+FQHDER +AGQGGRS GRR+ TER +   S
Sbjct: 74   SKETDKKPNEHGEGSKHSSKPTEVPWSRSFFQHDERGNAGQGGRSLGRRSATERRF-RDS 132

Query: 867  KERTCERLVGHNVDMKNFRKRDERTQGGVHDNNVWHHDRFHEFEADAPPPGRKRPAFREK 688
            K+   ER   +     + R+RDE+ +G   D +VW HD F + EA+ PPP RKRPAF+EK
Sbjct: 133  KDDRGER-TENKAATYDSRQRDEKPRGKGDDKSVWGHDGFLKMEAEPPPPVRKRPAFQEK 191

Query: 687  KLEPESGNAGEIVTESERPNHP----ELNGGKEERGR--RYLRDSDRLEKPVTGDRGPPH 526
            K+  E+ N  +   E  R NH      ++  +EER R  RY+   DR E+P  G+R    
Sbjct: 192  KIPAETDNPDKATVEPARSNHSHRPLSISERREERDRNPRYV---DRPERPAAGNR---- 244

Query: 525  RGETQRFGFSSRDRFGGAGGSNGRDRNTGRNWERNEYRPDNPRKEKWKHDMFDEANKSPS 346
              E ++   +SR+RFGG GG N R R   R  +R  YRP   R EKWKHD+FD+A++SP+
Sbjct: 245  --EVKKSDLASRERFGGDGGGNYRGRE--RFSDRQSYRPSGTRGEKWKHDLFDDADRSPT 300

Query: 345  PKTAEDQIAKVEALLAS 295
             K  EDQIAK+EALLAS
Sbjct: 301  KKNEEDQIAKIEALLAS 317


>ref|XP_002527518.1| conserved hypothetical protein [Ricinus communis]
            gi|223533158|gb|EEF34916.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 324

 Score =  257 bits (657), Expect = 4e-66
 Identities = 156/313 (49%), Positives = 191/313 (61%), Gaps = 3/313 (0%)
 Frame = -2

Query: 1224 PKRSRRDGKPESERNHARAHDLDTLNSKDKDQKLRRRLQDPLPLEAPIEPESKVVTDNAI 1045
            PKRSRRDGKPE+ER  +  + L+  +S D+DQ+ RRRL D LPLEAP  P+SKV      
Sbjct: 26   PKRSRRDGKPETERVPSYTN-LNVEDSTDRDQRHRRRLHDALPLEAPSAPDSKVEAGVLS 84

Query: 1044 SELEKTADEQNAGAKHFSDPTEVPRSRSYFQHDERASAGQGGRSFGRRATTERGWGSGSK 865
             + EK  +  + G K  SDP +VPRSRSYFQHDER +A Q GRS GRRATTER W     
Sbjct: 85   KDSEKKPNGDHEGTKRSSDPIDVPRSRSYFQHDERGNAAQVGRSIGRRATTERRWRDSKD 144

Query: 864  ERTCERLVGHNVDMKNFRKRDERTQGGVHDNNVWHHDRFHEFEADAPPPGRKRPAFREKK 685
            ER  ER +  + +  + ++RD R+     D +VWHHD F + EA+   P RKRPAFREKK
Sbjct: 145  ERN-ERAINKSSNYDS-QQRDGRSHAKGVDKSVWHHDAFFKMEAEPAAPVRKRPAFREKK 202

Query: 684  LEPESGNAGEIVTESERPNH---PELNGGKEERGRRYLRDSDRLEKPVTGDRGPPHRGET 514
            +  +S NA +   E  +P+H   P     +EER R   R SDR E+PV+      +R E 
Sbjct: 203  VPVDSENAEKTAIEPVKPSHSDRPSEIERREERDRN-PRHSDRSERPVSS-----NRKEA 256

Query: 513  QRFGFSSRDRFGGAGGSNGRDRNTGRNWERNEYRPDNPRKEKWKHDMFDEANKSPSPKTA 334
            QR G   R    G GG N ++R   R   R  YRP   R EKWKHDMFDEAN+SP  K  
Sbjct: 257  QRGGLWDRH---GVGGGNYKERE--RFSGRQIYRPGGTRPEKWKHDMFDEANRSPIKKNE 311

Query: 333  EDQIAKVEALLAS 295
            EDQIA VEALLAS
Sbjct: 312  EDQIANVEALLAS 324


>ref|XP_002265317.1| PREDICTED: uncharacterized protein LOC100263484 [Vitis vinifera]
            gi|296083051|emb|CBI22455.3| unnamed protein product
            [Vitis vinifera]
          Length = 344

 Score =  239 bits (610), Expect = 1e-60
 Identities = 147/331 (44%), Positives = 192/331 (58%), Gaps = 21/331 (6%)
 Frame = -2

Query: 1224 PKRSRRDGKPESERNHARAHDLDTLNSK--DKDQKLRRRLQDPLPLEAPIEPESKVVTDN 1051
            PKRSRRDGKPE+ER  +    L+T N    D+DQK RRRLQD LPLEAP+  +SK  T+ 
Sbjct: 24   PKRSRRDGKPETERIPS---SLNTTNGDHVDRDQKHRRRLQDALPLEAPLASDSKEETE- 79

Query: 1050 AISELEKTADEQNAGAKHFSDPT-EVPRSRSYFQHDERASAGQGGRSFGRRATTERGWGS 874
                + K +D++ +G +  + P+ ++PR RS+FQHDER  + Q GR F  RA TERGW  
Sbjct: 80   ---AVGKESDKKTSGPRDRTKPSSDIPRHRSFFQHDERDGSRQAGRRFSHRANTERGWWG 136

Query: 873  GSKERTCER-----------------LVGHNVDMKNFRKRDERTQG-GVHDNNVWHHDRF 748
             SK+   +R                    +     + +KRDE+++  G   N VW HD F
Sbjct: 137  DSKDHHGDRDPKDQHGDRDSKDQHREKATNKTVTDDTQKRDEKSEAQGSDKNRVWRHDGF 196

Query: 747  HEFEADAPPPGRKRPAFREKKLEPESGNAGEIVTESERPNHPELNGGKEERGRRYLRDSD 568
             E E++  PP RKRPAFREKK+  +   A +  TE+ +P+HP+      ERG R  R   
Sbjct: 197  FEMESNPHPPARKRPAFREKKIPVDHEIADKAATEAVKPSHPD-RSMLSERGGRNPRHLG 255

Query: 567  RLEKPVTGDRGPPHRGETQRFGFSSRDRFGGAGGSNGRDRNTGRNWERNEYRPDNPRKEK 388
            R E P +GD   P+RGE QR G  +     G GG N R+R+  R   R   R  + R EK
Sbjct: 256  RPENPFSGDGALPYRGEAQRSGGPAPRYGSGRGGGNFRERD--RFGGRQGQRSGDVRVEK 313

Query: 387  WKHDMFDEANKSPSPKTAEDQIAKVEALLAS 295
            WKHD+FDEAN+SP  K  E+QIAKVEALLAS
Sbjct: 314  WKHDLFDEANRSPVRKKEEEQIAKVEALLAS 344


>ref|XP_004152279.1| PREDICTED: uncharacterized protein LOC101213709 [Cucumis sativus]
            gi|449484361|ref|XP_004156862.1| PREDICTED:
            uncharacterized LOC101213709 [Cucumis sativus]
          Length = 335

 Score =  221 bits (563), Expect = 3e-55
 Identities = 146/323 (45%), Positives = 192/323 (59%), Gaps = 13/323 (4%)
 Frame = -2

Query: 1224 PKRSRRDGKPESERNHARAHDLDTLNSKDKDQKLRRRL--QDPLPLEAPIEPESKVVTDN 1051
            PKRS+RD K   E+  +R       ++K++DQK   RL  QD +P E+ +  ESK     
Sbjct: 24   PKRSKRDRKTLEEKL-SRNSSSHVEDNKERDQKHELRLVGQDMIPHESSLALESKPEGGA 82

Query: 1050 AISELEKTADEQNAGAKHFSDPTEVPRSRSYFQHDERASAGQGGRSFGRRATTERGWGSG 871
             I    + +D ++ G KH  +PTEVPRSRSYFQHDER++AGQ GRSFGR AT+ERGW   
Sbjct: 83   GIGA-NRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAGQVGRSFGRSATSERGWWKD 141

Query: 870  SK--ERTCERLVGHNVDMKNFRKRDERTQGGVHDNNVWHHDRFHEFEADAPPPGRKRPAF 697
            SK  ++  +R  G ++  K+ ++RDE+ Q    D    HHD   + E DA  P RKRPAF
Sbjct: 142  SKDPDKDSDRASGKSLTYKS-QQRDEKPQAAREDR---HHDGSSKLEVDALTPARKRPAF 197

Query: 696  REKKL--EPESGNAGEIVTESERPNH----PELNGGKEERGRRYLRDSDRLEKPVTGDRG 535
            REKK+  + E G    +V ES++ N      E    +EERGR   R S++L    +    
Sbjct: 198  REKKITVDNEDGEKVAMVPESKKSNDLHQIQEGRERREERGRD-PRYSEKLNNKHSNGDM 256

Query: 534  PPHRGETQRFGFSSRDRFG-GAGGSN--GRDRNTGRNWERNEYRPDNPRKEKWKHDMFDE 364
               R E +R G+  R+R+G G+GG N  GRDR  G    R  YR    R EKWKHD+F E
Sbjct: 257  ASKRDEMKRVGYPVRERYGNGSGGGNYRGRDRFGG----RQGYRTSGTRVEKWKHDLFHE 312

Query: 363  ANKSPSPKTAEDQIAKVEALLAS 295
            AN+SP+PK  EDQIAKVEALL+S
Sbjct: 313  ANRSPTPKNEEDQIAKVEALLSS 335


>gb|AFK35237.1| unknown [Lotus japonicus]
          Length = 330

 Score =  181 bits (460), Expect = 3e-43
 Identities = 131/330 (39%), Positives = 179/330 (54%), Gaps = 20/330 (6%)
 Frame = -2

Query: 1224 PKRSRRDGKPESERNHARAHDLDTLNSKDKDQKLRRRL-----------QDPLPLEA--- 1087
            PKR RRDGK + ER+  R  + +  + + +D   R R+           Q+P   +    
Sbjct: 21   PKRYRRDGKQDRERDRDRDRERERGSERGRD---RDRVTTNGGGGAGGDQNPTDRDQRNL 77

Query: 1086 PIEPESKVVTDNAISELEKTADEQNAGAKHFSDPTEVPRSRSYFQHDERASAGQGGRSFG 907
            P  P SK     ++   +K +++     KH + P   PRSRSY+QH ER +  Q GRS G
Sbjct: 78   PPPPHSK---QESVGAGDKKSNDHQEPPKHSAQP---PRSRSYYQHAERGNTEQVGRSAG 131

Query: 906  RRATTERGWGSGSKERTCERLVGHNVDMKNFRK-RDERTQGGVHDNNVWHHDRFHEFEAD 730
            RR    + +   SKE +        V+    R+ RDE++Q  + D+N+   D   E + D
Sbjct: 132  RREAGGKAFAQ-SKENS------ERVETSQSREQRDEKSQAKL-DDNLHRRDGSPERKDD 183

Query: 729  APPPGRKRPAFREKKLEPESGNAGEIV-TESERPNH----PELNGGKEERGRRYLRDSDR 565
             P   RKRPAFREKK++ +SG+A   V TE  + +H    PE N  KEER     R  +R
Sbjct: 184  PPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNP-RHLER 242

Query: 564  LEKPVTGDRGPPHRGETQRFGFSSRDRFGGAGGSNGRDRNTGRNWERNEYRPDNPRKEKW 385
             EK + GDR P +R E +R GFSSR R+GG+GG+N  DR   +   R  Y P   R EKW
Sbjct: 243  HEKQIAGDRAP-NRSEGRRDGFSSRARYGGSGGNNN-DRGRDKFNARQGYHPIKTRTEKW 300

Query: 384  KHDMFDEANKSPSPKTAEDQIAKVEALLAS 295
            KHD+F EA+  P PK  +DQIAK+EALLAS
Sbjct: 301  KHDLFQEADNDPVPKNEDDQIAKLEALLAS 330


Top